FFCP PHASE1:Hg19::chr5:90676037..90676056,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57561 | |EntrezGene=57561 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29263 | |HGNC=29263 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-69bp_to_ENST00000503192_5end | |association_with_transcript=-69bp_to_ENST00000503192_5end | ||
|cluster_id=chr5:90676037..90676056,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_11_at_ARRDC3_5end | |description=CAGE_peak_11_at_ARRDC3_5end | ||
|id=chr5:90676037..90676056,- | |id=chr5:90676037..90676056,- | ||
|ontology_enrichment_celltype=CL:0002057!7.98e-16!42;CL:0000860!3.13e-15!45;CL:0000766!1.74e-13!76;CL:0000738!4.29e-12!140;CL:0000557!9.91e-12!71;CL:0002009!2.68e-11!65;CL:0000839!3.50e-11!70;CL:0002194!2.57e-10!63;CL:0000576!2.57e-10!63;CL:0000040!2.57e-10!63;CL:0000559!2.57e-10!63;CL:0002031!1.91e-09!124;CL:0000763!4.11e-09!112;CL:0000049!4.11e-09!112;CL:0002087!9.04e-09!119;CL:0000037!1.38e-08!172;CL:0000566!1.38e-08!172;CL:0002032!6.26e-08!165;CL:0000837!6.26e-08!165;CL:0000988!9.37e-07!182 | |ontology_enrichment_celltype=CL:0002057!7.98e-16!42;CL:0000860!3.13e-15!45;CL:0000766!1.74e-13!76;CL:0000738!4.29e-12!140;CL:0000557!9.91e-12!71;CL:0002009!2.68e-11!65;CL:0000839!3.50e-11!70;CL:0002194!2.57e-10!63;CL:0000576!2.57e-10!63;CL:0000040!2.57e-10!63;CL:0000559!2.57e-10!63;CL:0002031!1.91e-09!124;CL:0000763!4.11e-09!112;CL:0000049!4.11e-09!112;CL:0002087!9.04e-09!119;CL:0000037!1.38e-08!172;CL:0000566!1.38e-08!172;CL:0002032!6.26e-08!165;CL:0000837!6.26e-08!165;CL:0000988!9.37e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.66e-14;33!CL:0002057;1.66e-14;33!CL:0000094;1.15e-12;8!CL:0000623;2.17e-12;3!CL:0000576;1.38e-11;48!CL:0000766;5.56e-11;69!CL:0000081;4.13e-09;11!CL:0000473;8.28e-09;39!CL:0000234;8.28e-09;39!CL:0002393;5.96e-07;6!CL:0002397;5.96e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.52e-20,136;CL:0000860,1.24e-19,42;CL:0002057,1.24e-19,42;CL:0000766,2.29e-18,72;CL:0000473,1.06e-16,48;CL:0000234,1.06e-16,48;CL:0000037,7.62e-15,168;CL:0002087,7.93e-15,115;CL:0002009,7.47e-14,61;CL:0000988,1.02e-13,177;CL:0002032,2.50e-13,161;CL:0000837,2.50e-13,161;CL:0000623,6.03e-13,3;CL:0000825,6.03e-13,3;CL:0000094,9.55e-13,8;CL:0002031,1.22e-12,120;CL:0002194,1.30e-12,59;CL:0000576,1.30e-12,59;CL:0000040,1.30e-12,59;CL:0000559,1.30e-12,59;CL:0000557,2.80e-12,67;CL:0000763,6.81e-12,108;CL:0000049,6.81e-12,108;CL:0000839,6.53e-11,66;CL:0000081,3.61e-09,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.80e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!7.66e-10!86;UBERON:0002390!8.59e-10!102;UBERON:0003061!8.59e-10!102;UBERON:0002371!1.02e-09!80;UBERON:0004765!1.99e-08!101;UBERON:0001434!1.99e-08!101;UBERON:0002193!6.19e-08!112;UBERON:0002405!8.24e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.31e-10,82;UBERON:0002371,2.18e-10,76;UBERON:0002390,1.85e-09,98;UBERON:0003061,1.85e-09,98;UBERON:0004765,2.56e-09,90;UBERON:0002193,3.35e-08,108;UBERON:0001434,5.31e-08,100;UBERON:0002405,7.96e-08,93 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0.273748850145768,0.125542639594803,0.152826811495903,0.0821005894499457,0.157421562627358,2.36018566109342,0.383829398097213,2.01260960310899,0,0,0.369754010166788,0,0,0,9.41792194504192,10.6288557159175,9.54847831149748,0,0,0.257575567634187,1.16318591023652,0,0.485168122375632,0.464858073811369,0.411167888021826,0.619412741790207,1.1507695692886,0.512321413058201,0.709446689665756,1.03423704220986,0.645484683583826,0,1.50593871634084,0.818718450173537,0.898893937780338,0.306083892370903,1.28371610830437,0,0.659702600373432,0.398927315243264,0.852449501065388,0.580418477257168,1.70215567407342,1.86846674698672,1.00499466102697,1.5644487552606,1.08594422352558,1.21079900526674,1.47311054395026,1.26584954976354,0.422510572623884,0,0.628975936525128,0.22465726229299,0.150176892841506,0.32145117339416,0,0,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,0,0,0.382273228125229,3.96513985737078,0,0,0.983548850569165,1.57204305099666,2.05601498999509,0,0.32592226663359,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,1.81446068902259,1.60464117470104,0.868946423296794,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0.283604451492204,0.221729397462564,0.087834785693126,0.392937226493138,0.364295288292542,0.370784442784429,0,0.174129737299267,0.132957960518865,0.953962497221368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366403487860815,2.63560834872127,0,0,0,0.379891534993739,0.662045904066094,0,0.354668382198357,0,1.06748995729705,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0.506328996723799,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,1.18157981336281,0.441463099414651,0.122988438543114,0.514703430895577,0,0,0.201057944823262,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0.829312462163088,0.432359860250884,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0.799266537048298,0.285955987316295,0.542621605391443,0.823240336780769,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,1.57624608161542,1.72502059887614,2.69520376187472,0.76228387266739,0,0,0,0,1.49801404789436,0,2.48649308061621,0.12269149171914,0,0,0.415941723061614,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0.82707210449155,1.72571360654893,1.38745825144478,0,0,0,0.248107807818777,0,0,0,0,0,0,0.308419387605311,0.355123450626254,0.328508624055237,0.519254429183621,0.116210378459959,0,0,0.0920809889358963,0.114814448164607,0,0.524497659837696,0.451199612907412,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0.657779629937804,0,0,0,0,0.412164046590889,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0.6970372701606,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0,0,0,1.10273068709225,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0.213425530045242,0.159426272728822,0,0,0.211673582723883,0,0,0.228234679033192,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0,0.293016358543788,0.121360521749513,0,1.13654458722565,0,0,0,0,0.562677665642051,0.890469640183247,0.659215496907038,0.211125408127993,0.19924798825107,0.552567831062295,0,0,0.123084805461069,0,0.0898683511473268,0.179021174675609,0.511572370226872,0.0986434056369336,0,0,0,0.278304294485554,0,0.260427761085233,0.0874599999961957,1.44999915086959,0.1137934482855,0,0,0,0.583209226766509,0.520874984799877,0,0.361789315876224,0,0.442317039724898,0,0,0,0,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0.217294743844016,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0.167821586975843,0.189753732724185,0,0,0.163232808159148,0,0.216388639742091,0,0.176915129006678,0.611030144933625,0,0,0,0.202203398942031,0,0,0,0,0.242780379534093,0.394584402849391,1.20990716048664,0,0.31593289814244,0,0.103688191397247,0,0,0,0,0,0.277349346026277,0,0,0,0.17472666824203,0.171986032471617,0.290268993867255,0.0730893170861856,0,0.193978032976839,0,0,0,0,0.126621591911757,0.586654148204409,0.160317640503067,0.213452994739353,0,0.144090417154106,0.229073192331831,0.514784993585894,0.14405479798815,0.49701014226173,0,0.135904206073614,0.627617077873999,0.305994652908965,0,0,0.958337652243951,0,0,0,0.837847203816763,0.229160424011684,2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| ||
|short_description=p11@ARRDC3 | |short_description=p11@ARRDC3 | ||
}} | }} |
Latest revision as of 05:11, 19 September 2015
Short description: | p11@ARRDC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ARRDC3_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -69bp_to_ENST00000503192_5end |
EntrezGene: | ARRDC3 |
HGNC: | 29263 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.52e-20 | 136 |
classical monocyte | 1.24e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.24e-19 | 42 |
myeloid leukocyte | 2.29e-18 | 72 |
defensive cell | 1.06e-16 | 48 |
phagocyte | 1.06e-16 | 48 |
hematopoietic stem cell | 7.62e-15 | 168 |
nongranular leukocyte | 7.93e-15 | 115 |
macrophage dendritic cell progenitor | 7.47e-14 | 61 |
hematopoietic cell | 1.02e-13 | 177 |
hematopoietic oligopotent progenitor cell | 2.50e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.50e-13 | 161 |
natural killer cell | 6.03e-13 | 3 |
pro-NK cell | 6.03e-13 | 3 |
granulocyte | 9.55e-13 | 8 |
hematopoietic lineage restricted progenitor cell | 1.22e-12 | 120 |
monopoietic cell | 1.30e-12 | 59 |
monocyte | 1.30e-12 | 59 |
monoblast | 1.30e-12 | 59 |
promonocyte | 1.30e-12 | 59 |
granulocyte monocyte progenitor cell | 2.80e-12 | 67 |
myeloid cell | 6.81e-12 | 108 |
common myeloid progenitor | 6.81e-12 | 108 |
myeloid lineage restricted progenitor cell | 6.53e-11 | 66 |
blood cell | 3.61e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.31e-10 | 82 |
bone marrow | 2.18e-10 | 76 |
hematopoietic system | 1.85e-09 | 98 |
blood island | 1.85e-09 | 98 |
skeletal element | 2.56e-09 | 90 |
hemolymphoid system | 3.35e-08 | 108 |
skeletal system | 5.31e-08 | 100 |
immune system | 7.96e-08 | 93 |