FFCP PHASE1:Hg19::chr12:94730118..94730123,-: Difference between revisions
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|id=chr12:94730118..94730123,-
|short_description=p13@CCDC41
|description=CAGE_peak_13_at_CCDC41_5end
|association_with_transcript=-494bp_to_ENST00000546587_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51134 | |EntrezGene=51134 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17966 | |HGNC=17966 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-494bp_to_ENST00000546587_5end | |||
|cluster_id=chr12:94730118..94730123,- | |||
|coexpression_cluster_id=C188 | |||
|description=CAGE_peak_13_at_CCDC41_5end | |||
|id=chr12:94730118..94730123,- | |||
|ontology_enrichment_celltype=CL:0002097!2.74e-15!2;CL:0000174!1.20e-10!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.55e-98;1!UBERON:0004140;1.55e-98;1!UBERON:0004872;1.78e-15;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!1.49e-38!3;UBERON:0009751!1.49e-38!3;UBERON:0000946!1.49e-38!3;UBERON:0002523!1.49e-38!3;UBERON:0005983!1.49e-38!3;UBERON:0002165!1.49e-38!3;UBERON:0002062!1.49e-38!3;UBERON:0007280!1.49e-38!3;UBERON:0002079!7.48e-30!1;UBERON:0002146!1.33e-29!1;UBERON:0005623!1.33e-29!1;UBERON:0002135!1.78e-29!1;UBERON:0007100!1.53e-26!27;UBERON:0000948!1.83e-19!24;UBERON:0005498!1.83e-19!24;UBERON:0004140!1.83e-19!24;UBERON:0009881!1.83e-19!24;UBERON:0004141!1.83e-19!24;UBERON:0003084!1.83e-19!24;UBERON:0007005!1.83e-19!24;UBERON:0004139!1.83e-19!24;UBERON:0004291!1.83e-19!24;UBERON:0002342!7.78e-19!14;UBERON:0005062!7.78e-19!14;UBERON:0002081!1.15e-15!2;UBERON:0002133!1.78e-15!2;UBERON:0004151!6.73e-11!3;UBERON:0002369!1.20e-10!3;UBERON:0001235!1.20e-10!3;UBERON:0006858!1.20e-10!3;UBERON:0003103!1.24e-10!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.55e-98;1!UBERON:0002081;3.52e-50;2!UBERON:0004151;5.04e-34;3!UBERON:0000948;3.41e-19;22!UBERON:0007100;4.64e-17;25!UBERON:0003103;1.53e-08;61!UBERON:0001009;4.45e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,9.37e-99,1;UBERON:0002081,2.74e-50,2;UBERON:0010227,2.74e-50,2;UBERON:0004151,4.27e-34,3;UBERON:0000948,1.03e-17,24;UBERON:0005498,1.03e-17,24;UBERON:0004140,1.03e-17,24;UBERON:0009881,1.03e-17,24;UBERON:0004141,1.03e-17,24;UBERON:0003084,1.03e-17,24;UBERON:0007005,1.03e-17,24;UBERON:0004139,1.03e-17,24;UBERON:0004291,1.03e-17,24;UBERON:0007100,6.71e-16,27;UBERON:0003103,4.47e-07,68 | |||
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|short_description=p13@CCDC41 | |||
}} | }} |
Latest revision as of 01:25, 16 September 2015
Short description: | p13@CCDC41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CCDC41_5end |
Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
Association with transcript: | -494bp_to_ENST00000546587_5end |
EntrezGene: | CCDC41 |
HGNC: | 17966 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 9.37e-99 | 1 |
cardiac atrium | 2.74e-50 | 2 |
future cardiac atrium | 2.74e-50 | 2 |
cardiac chamber | 4.27e-34 | 3 |
heart | 1.03e-17 | 24 |
primitive heart tube | 1.03e-17 | 24 |
primary heart field | 1.03e-17 | 24 |
anterior lateral plate mesoderm | 1.03e-17 | 24 |
heart tube | 1.03e-17 | 24 |
heart primordium | 1.03e-17 | 24 |
cardiac mesoderm | 1.03e-17 | 24 |
cardiogenic plate | 1.03e-17 | 24 |
heart rudiment | 1.03e-17 | 24 |
primary circulatory organ | 6.71e-16 | 27 |
compound organ | 4.47e-07 | 68 |