FFCP PHASE1:Hg19::chr6:138014193..138014210,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:138014193..138014210,+ | |||
|description=CAGE_peak_at_chr6:138014193..138014210,+ | |description=CAGE_peak_at_chr6:138014193..138014210,+ | ||
|id=chr6:138014193..138014210,+ | |id=chr6:138014193..138014210,+ | ||
|ontology_enrichment_celltype=CL:1000507!5.03e-13!12;CL:1000494!5.03e-13!12;CL:1000497!9.69e-12!18;CL:0002518!9.69e-12!18;CL:1000449!2.46e-11!16;CL:0002681!1.64e-09!13;CL:0002584!1.64e-09!13;CL:0000359!5.82e-08!32 | |ontology_enrichment_celltype=CL:1000507!5.03e-13!12;CL:1000494!5.03e-13!12;CL:1000497!9.69e-12!18;CL:0002518!9.69e-12!18;CL:1000449!2.46e-11!16;CL:0002681!1.64e-09!13;CL:0002584!1.64e-09!13;CL:0000359!5.82e-08!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.94e-17;32!CL:0000159;3.16e-12;2!CL:0002589;5.21e-12;2!CL:0002593;5.21e-12;2!CL:0002595;1.35e-10;5!CL:0000192;3.05e-09;43!CL:1000449;3.58e-09;15!CL:1000507;4.13e-09;10!CL:1000494;4.13e-09;10!CL:0002166;1.57e-08;3!CL:1000497;4.64e-08;17!CL:0002518;4.64e-08;17!CL:0002681;1.38e-07;12!CL:0002584;1.38e-07;12!CL:0000319;3.03e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.14e-18,32;CL:0000192,3.74e-13,43;CL:0000514,3.74e-13,43;CL:0000159,3.00e-12,2;CL:0002589,3.35e-12,2;CL:0002593,1.07e-11,2;CL:0002595,2.24e-10,5;CL:0000187,7.81e-10,55;CL:1000449,2.62e-09,15;CL:1000507,2.79e-09,10;CL:1000494,2.79e-09,10;CL:0000680,3.21e-09,58;CL:0000056,3.21e-09,58;CL:0000355,3.21e-09,58;CL:0000393,1.15e-08,61;CL:0000211,1.15e-08,61;CL:0002166,1.46e-08,3;CL:1000497,3.53e-08,17;CL:0002518,3.53e-08,17;CL:0002681,1.00e-07,12;CL:0002584,1.00e-07,12;CL:0000319,2.95e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000514;3.05e-09;43 | |||
|ontology_enrichment_disease=DOID:193!2.61e-16!29;DOID:120!6.05e-16!27;DOID:2394!8.74e-13!14 | |||
|ontology_enrichment_disease_v019=DOID:3030;3.03e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.95e-07,1;DOID:0060060,7.82e-07,1;DOID:0060061,7.82e-07,1;DOID:8691,7.82e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003914!1.93e-14!118;UBERON:0009773!5.03e-13!12;UBERON:0001231!5.03e-13!12;UBERON:0004810!5.03e-13!12;UBERON:0006555!8.15e-13!17;UBERON:0005103!8.15e-13!17;UBERON:0000083!8.15e-13!17;UBERON:0009201!8.15e-13!17;UBERON:0004819!8.15e-13!17;UBERON:0006553!8.15e-13!17;UBERON:0003074!8.15e-13!17;UBERON:0003060!8.15e-13!17;UBERON:0000080!6.47e-12!18;UBERON:0002120!6.47e-12!18;UBERON:0004875!6.47e-12!18;UBERON:0005721!6.47e-12!18;UBERON:0005754!6.47e-12!18;UBERON:0007297!6.47e-12!18;UBERON:0004211!2.46e-11!16;UBERON:0001285!2.46e-11!16;UBERON:0007684!2.46e-11!16;UBERON:0003220!2.46e-11!16;UBERON:0004208!2.46e-11!16;UBERON:0004876!2.16e-10!20;UBERON:0001637!4.31e-10!42;UBERON:0003509!4.31e-10!42;UBERON:0004572!4.31e-10!42;UBERON:0003887!9.63e-10!21;UBERON:0001225!1.64e-09!13;UBERON:0008987!1.64e-09!13;UBERON:0002113!1.92e-09!27;UBERON:0003918!1.92e-09!27;UBERON:0005095!1.92e-09!27;UBERON:0007687!1.92e-09!27;UBERON:0000992!3.49e-09!13;UBERON:0003886!3.75e-09!63;UBERON:0001981!7.12e-09!60;UBERON:0007500!7.12e-09!60;UBERON:0004537!7.12e-09!60;UBERON:0006965!7.12e-09!60;UBERON:0004872!8.55e-09!84;UBERON:0003081!9.10e-09!216;UBERON:0000353!1.72e-08!17;UBERON:0002553!2.08e-08!70;UBERON:0002118!2.79e-08!5;UBERON:0004532!2.79e-08!5;UBERON:0000055!1.23e-07!69;UBERON:0000489!2.16e-07!32;UBERON:0001009!2.22e-07!113;UBERON:0000991!2.37e-07!21;UBERON:0009196!2.37e-07!21;UBERON:0009117!2.37e-07!21;UBERON:0005564!2.37e-07!21;UBERON:0003103!2.41e-07!69;UBERON:0001851!2.46e-07!16;UBERON:0004573!2.51e-07!33;UBERON:0004571!2.51e-07!33;UBERON:0000058!2.87e-07!26;UBERON:0004535!3.29e-07!110;UBERON:0004176!6.68e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.54e-14;33!UBERON:0004571;5.54e-14;33!UBERON:0001529;5.21e-12;2!UBERON:0002456;5.21e-12;2!UBERON:0007204;5.21e-12;2!UBERON:0001637;1.48e-11;42!UBERON:0003509;1.48e-11;42!UBERON:0004572;1.48e-11;42!UBERON:0003834;1.35e-10;5!UBERON:0001533;1.35e-10;5!UBERON:0006555;3.58e-09;15!UBERON:0004819;3.58e-09;15!UBERON:0001285;3.58e-09;15!UBERON:0007684;3.58e-09;15!UBERON:0004211;4.13e-09;10!UBERON:0009773;4.13e-09;10!UBERON:0001231;4.13e-09;10!UBERON:0004810;4.13e-09;10!UBERON:0003513;1.08e-07;7!UBERON:0001225;1.38e-07;12!UBERON:0008987;1.38e-07;12!UBERON:0003914;3.57e-07;74!UBERON:0001301;3.61e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.09e-17,117;UBERON:0001637,4.33e-16,42;UBERON:0003509,4.33e-16,42;UBERON:0004572,4.33e-16,42;UBERON:0004573,1.28e-14,33;UBERON:0004571,1.28e-14,33;UBERON:0006555,2.43e-12,16;UBERON:0004819,2.43e-12,16;UBERON:0001529,3.35e-12,2;UBERON:0007204,3.35e-12,2;UBERON:0002456,1.07e-11,2;UBERON:0004872,2.44e-11,83;UBERON:0007500,8.88e-11,59;UBERON:0001981,8.88e-11,59;UBERON:0004537,8.88e-11,59;UBERON:0006965,8.88e-11,59;UBERON:0003834,2.24e-10,5;UBERON:0001533,2.24e-10,5;UBERON:0004211,2.62e-09,15;UBERON:0009773,2.62e-09,15;UBERON:0001231,2.62e-09,15;UBERON:0001285,2.62e-09,15;UBERON:0007684,2.62e-09,15;UBERON:0004208,2.62e-09,15;UBERON:0004810,2.79e-09,10;UBERON:0000055,4.78e-09,68;UBERON:0000025,7.17e-09,192;UBERON:0001134,1.71e-08,62;UBERON:0002036,1.71e-08,62;UBERON:0003082,1.71e-08,62;UBERON:0002385,3.63e-08,64;UBERON:0001015,3.63e-08,64;UBERON:0000383,3.63e-08,64;UBERON:0004535,6.51e-08,109;UBERON:0001225,1.00e-07,12;UBERON:0008987,1.00e-07,12;UBERON:0007503,1.09e-07,78;UBERON:0001009,1.27e-07,112;UBERON:0002049,1.34e-07,78;UBERON:0007798,1.34e-07,78;UBERON:0003513,1.54e-07,7;UBERON:0002113,2.36e-07,26;UBERON:0003918,2.36e-07,26;UBERON:0011143,2.36e-07,26;UBERON:0005095,2.36e-07,26;UBERON:0007687,2.36e-07,26;UBERON:0003104,3.14e-07,160;UBERON:0009142,3.14e-07,160;UBERON:0001301,3.52e-07,1;UBERON:0002329,3.64e-07,71;UBERON:0003059,3.64e-07,71;UBERON:0007282,3.64e-07,71;UBERON:0004290,3.64e-07,71;UBERON:0009618,3.64e-07,71;UBERON:0003077,4.88e-07,72;UBERON:0007285,4.88e-07,72;UBERON:0007524,6.48e-07,73 | |||
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| ||
|short_description=p@chr6:138014193..138014210,+ | |short_description=p@chr6:138014193..138014210,+ | ||
}} | }} |
Latest revision as of 19:59, 30 July 2015
Short description: | p@chr6:138014193..138014210, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:138014193..138014210, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.14e-18 | 32 |
smooth muscle cell | 3.74e-13 | 43 |
smooth muscle myoblast | 3.74e-13 | 43 |
seromucus secreting cell | 3.00e-12 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 3.35e-12 | 2 |
smooth muscle cell of the internal thoracic artery | 1.07e-11 | 2 |
smooth muscle cell of the subclavian artery | 2.24e-10 | 5 |
muscle cell | 7.81e-10 | 55 |
epithelial cell of nephron | 2.62e-09 | 15 |
kidney tubule cell | 2.79e-09 | 10 |
nephron tubule epithelial cell | 2.79e-09 | 10 |
muscle precursor cell | 3.21e-09 | 58 |
myoblast | 3.21e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.21e-09 | 58 |
electrically responsive cell | 1.15e-08 | 61 |
electrically active cell | 1.15e-08 | 61 |
epithelial cell of Malassez | 1.46e-08 | 3 |
kidney cell | 3.53e-08 | 17 |
kidney epithelial cell | 3.53e-08 | 17 |
kidney cortical cell | 1.00e-07 | 12 |
renal cortical epithelial cell | 1.00e-07 | 12 |
mucus secreting cell | 2.95e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.95e-07 | 1 |
non-Hodgkin lymphoma | 7.82e-07 | 1 |
cutaneous T cell lymphoma | 7.82e-07 | 1 |
mycosis fungoides | 7.82e-07 | 1 |