FFCP PHASE1:Hg19::chr6:158452675..158452686,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:158452675..158452686,+ | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr6:158452675..158452686,+ | |description=CAGE_peak_at_chr6:158452675..158452686,+ | ||
|id=chr6:158452675..158452686,+ | |id=chr6:158452675..158452686,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.77e-74!42;CL:0000860!1.91e-68!45;CL:0000766!4.76e-55!76;CL:0000839!1.33e-49!70;CL:0002194!4.36e-49!63;CL:0000576!4.36e-49!63;CL:0000040!4.36e-49!63;CL:0000559!4.36e-49!63;CL:0000557!8.51e-49!71;CL:0002009!2.35e-47!65;CL:0000738!2.30e-41!140;CL:0002087!9.82e-36!119;CL:0000763!1.22e-34!112;CL:0000049!1.22e-34!112;CL:0002031!6.02e-32!124;CL:0000037!7.93e-32!172;CL:0000566!7.93e-32!172;CL:0000988!1.57e-29!182;CL:0002032!9.63e-27!165;CL:0000837!9.63e-27!165;CL:0002393!1.85e-14!9;CL:0002397!1.85e-14!9;CL:0000134!3.82e-14!358;CL:0002320!1.15e-13!365;CL:0000219!8.68e-13!390;CL:0000767!1.03e-12!3;CL:0000048!2.49e-12!430;CL:0000723!5.24e-12!436;CL:0000034!1.37e-11!444;CL:0000623!3.71e-11!3;CL:0000825!3.71e-11!3;CL:0000842!5.48e-11!3;CL:0000224!2.36e-08!4;CL:0002371!1.20e-07!591 | |ontology_enrichment_celltype=CL:0002057!6.77e-74!42;CL:0000860!1.91e-68!45;CL:0000766!4.76e-55!76;CL:0000839!1.33e-49!70;CL:0002194!4.36e-49!63;CL:0000576!4.36e-49!63;CL:0000040!4.36e-49!63;CL:0000559!4.36e-49!63;CL:0000557!8.51e-49!71;CL:0002009!2.35e-47!65;CL:0000738!2.30e-41!140;CL:0002087!9.82e-36!119;CL:0000763!1.22e-34!112;CL:0000049!1.22e-34!112;CL:0002031!6.02e-32!124;CL:0000037!7.93e-32!172;CL:0000566!7.93e-32!172;CL:0000988!1.57e-29!182;CL:0002032!9.63e-27!165;CL:0000837!9.63e-27!165;CL:0002393!1.85e-14!9;CL:0002397!1.85e-14!9;CL:0000134!3.82e-14!358;CL:0002320!1.15e-13!365;CL:0000219!8.68e-13!390;CL:0000767!1.03e-12!3;CL:0000048!2.49e-12!430;CL:0000723!5.24e-12!436;CL:0000034!1.37e-11!444;CL:0000623!3.71e-11!3;CL:0000825!3.71e-11!3;CL:0000842!5.48e-11!3;CL:0000224!2.36e-08!4;CL:0002371!1.20e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.69e-44;33!CL:0002057;2.69e-44;33!CL:0000767;5.71e-31;3!CL:0000576;6.39e-30;48!CL:0000473;6.70e-29;39!CL:0000234;6.70e-29;39!CL:0000766;2.70e-23;69!CL:0002393;9.14e-16;6!CL:0002397;9.14e-16;6!CL:0000094;5.21e-12;8!CL:0002591;4.01e-11;1!CL:0000081;7.08e-09;11!CL:0002087;1.05e-08;104!CL:0000763;2.76e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.94e-58,42;CL:0002057,3.94e-58,42;CL:0000473,1.35e-50,48;CL:0000234,1.35e-50,48;CL:0000766,1.02e-46,72;CL:0002194,4.89e-40,59;CL:0000576,4.89e-40,59;CL:0000040,4.89e-40,59;CL:0000559,4.89e-40,59;CL:0002009,1.13e-38,61;CL:0000839,1.28e-35,66;CL:0000557,4.60e-35,67;CL:0000767,4.91e-31,3;CL:0000763,1.75e-30,108;CL:0000049,1.75e-30,108;CL:0000738,9.71e-24,136;CL:0002032,1.12e-19,161;CL:0000837,1.12e-19,161;CL:0002087,1.36e-19,115;CL:0000037,9.37e-19,168;CL:0002031,1.10e-18,120;CL:0000988,1.13e-17,177;CL:0000094,4.93e-12,8;CL:0002591,5.43e-11,1;CL:0002393,9.02e-11,9;CL:0002397,9.02e-11,9;CL:0000081,6.80e-09,11;CL:0000134,1.78e-07,354;CL:0002320,2.83e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.54e-47;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.95e-45!80;UBERON:0001474!1.53e-41!86;UBERON:0002390!1.10e-40!102;UBERON:0003061!1.10e-40!102;UBERON:0002193!2.82e-36!112;UBERON:0004765!3.61e-34!101;UBERON:0001434!3.61e-34!101;UBERON:0002405!6.51e-31!115;UBERON:0002204!1.62e-21!167;UBERON:0003081!6.07e-18!216;UBERON:0002384!5.15e-13!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.06e-30,76;UBERON:0001474,2.58e-28,82;UBERON:0004765,1.27e-25,90;UBERON:0002405,9.90e-25,93;UBERON:0002390,2.30e-23,98;UBERON:0003061,2.30e-23,98;UBERON:0001434,7.44e-23,100;UBERON:0002193,5.27e-21,108;UBERON:0002204,1.30e-14,167;UBERON:0003081,1.40e-11,203;UBERON:0002384,5.33e-07,371 | |||
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| ||
|short_description=p@chr6:158452675..158452686,+ | |short_description=p@chr6:158452675..158452686,+ | ||
}} | }} |
Latest revision as of 21:24, 30 July 2015
Short description: | p@chr6:158452675..158452686, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:158452675..158452686, + |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.94e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.94e-58 | 42 |
defensive cell | 1.35e-50 | 48 |
phagocyte | 1.35e-50 | 48 |
myeloid leukocyte | 1.02e-46 | 72 |
monopoietic cell | 4.89e-40 | 59 |
monocyte | 4.89e-40 | 59 |
monoblast | 4.89e-40 | 59 |
promonocyte | 4.89e-40 | 59 |
macrophage dendritic cell progenitor | 1.13e-38 | 61 |
myeloid lineage restricted progenitor cell | 1.28e-35 | 66 |
granulocyte monocyte progenitor cell | 4.60e-35 | 67 |
basophil | 4.91e-31 | 3 |
myeloid cell | 1.75e-30 | 108 |
common myeloid progenitor | 1.75e-30 | 108 |
leukocyte | 9.71e-24 | 136 |
hematopoietic oligopotent progenitor cell | 1.12e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.12e-19 | 161 |
nongranular leukocyte | 1.36e-19 | 115 |
hematopoietic stem cell | 9.37e-19 | 168 |
hematopoietic lineage restricted progenitor cell | 1.10e-18 | 120 |
hematopoietic cell | 1.13e-17 | 177 |
granulocyte | 4.93e-12 | 8 |
smooth muscle cell of the pulmonary artery | 5.43e-11 | 1 |
intermediate monocyte | 9.02e-11 | 9 |
CD14-positive, CD16-positive monocyte | 9.02e-11 | 9 |
blood cell | 6.80e-09 | 11 |
mesenchymal cell | 1.78e-07 | 354 |
connective tissue cell | 2.83e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.06e-30 | 76 |
bone element | 2.58e-28 | 82 |
skeletal element | 1.27e-25 | 90 |
immune system | 9.90e-25 | 93 |
hematopoietic system | 2.30e-23 | 98 |
blood island | 2.30e-23 | 98 |
skeletal system | 7.44e-23 | 100 |
hemolymphoid system | 5.27e-21 | 108 |
musculoskeletal system | 1.30e-14 | 167 |
lateral plate mesoderm | 1.40e-11 | 203 |
connective tissue | 5.33e-07 | 371 |