FFCP PHASE1:Hg19::chr20:36779336..36779341,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:36779336..36779341,- | |||
|description=CAGE_peak_at_chr20:36779336..36779341,- | |description=CAGE_peak_at_chr20:36779336..36779341,- | ||
|id=chr20:36779336..36779341,- | |id=chr20:36779336..36779341,- | ||
|ontology_enrichment_celltype=CL:0002139!4.59e-21!24;CL:0000115!2.13e-18!35;CL:0002078!2.51e-15!44;CL:0000071!9.53e-15!18;CL:0002546!9.53e-15!18;CL:0000066!2.68e-13!254;CL:0000213!8.03e-10!57;CL:0000215!8.03e-10!57;CL:0000222!2.54e-09!119;CL:0002543!1.02e-08!6;CL:0005020!5.01e-08!6;CL:0002138!5.01e-08!6;CL:0005022!5.01e-08!6;CL:0002321!8.47e-08!248;CL:0000220!1.24e-07!246;CL:1000413!3.92e-07!9 | |ontology_enrichment_celltype=CL:0002139!4.59e-21!24;CL:0000115!2.13e-18!35;CL:0002078!2.51e-15!44;CL:0000071!9.53e-15!18;CL:0002546!9.53e-15!18;CL:0000066!2.68e-13!254;CL:0000213!8.03e-10!57;CL:0000215!8.03e-10!57;CL:0000222!2.54e-09!119;CL:0002543!1.02e-08!6;CL:0005020!5.01e-08!6;CL:0002138!5.01e-08!6;CL:0005022!5.01e-08!6;CL:0002321!8.47e-08!248;CL:0000220!1.24e-07!246;CL:1000413!3.92e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000071;3.91e-20;18!CL:0000115;5.51e-15;36!CL:0002139;1.04e-14;24!CL:0002543;3.81e-13;6!CL:0000349;8.99e-12;19!CL:0002536;2.16e-11;2!CL:0000764;1.84e-10;2!CL:0002195;1.84e-10;2!CL:0002571;1.84e-10;2!CL:0000558;1.84e-10;2!CL:1000413;9.20e-09;9!CL:0002078;3.38e-08;45!CL:0002544;7.72e-08;6!CL:0002577;1.66e-07;3!CL:0002618;3.00e-07;3!CL:0000213;4.67e-07;58!CL:0000215;4.67e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,1.43e-20,18;CL:0002546,1.43e-20,18;CL:0000115,5.22e-17,36;CL:0002139,4.98e-15,24;CL:0002543,2.23e-13,6;CL:0002078,4.14e-13,45;CL:0000349,1.40e-11,19;CL:0002536,2.46e-11,2;CL:0000764,1.04e-10,2;CL:0000765,1.04e-10,2;CL:0000050,1.04e-10,2;CL:0000038,1.04e-10,2;CL:0000558,1.04e-10,2;CL:0000547,1.04e-10,2;CL:0000549,1.04e-10,2;CL:0000550,1.04e-10,2;CL:0000552,1.04e-10,2;CL:0002195,2.04e-10,2;CL:0002571,2.04e-10,2;CL:0000213,1.26e-09,58;CL:0000215,1.26e-09,58;CL:1000413,6.31e-09,9;CL:0002544,5.12e-08,6;CL:0002577,1.26e-07,3;CL:0002618,1.99e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;3.91e-20;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.92e-18!110;UBERON:0001009!4.69e-18!113;UBERON:0002049!1.14e-16!79;UBERON:0007798!1.14e-16!79;UBERON:0001986!9.53e-15!18;UBERON:0004638!9.53e-15!18;UBERON:0004852!9.53e-15!18;UBERON:0000487!2.40e-14!22;UBERON:0000055!9.83e-13!69;UBERON:0003914!1.54e-12!118;UBERON:0006914!6.01e-12!25;UBERON:0000490!2.14e-11!138;UBERON:0004872!5.84e-10!84;UBERON:0001981!1.22e-09!60;UBERON:0007500!1.22e-09!60;UBERON:0004537!1.22e-09!60;UBERON:0006965!1.22e-09!60;UBERON:0005631!1.53e-08!14;UBERON:0000158!1.53e-08!14;UBERON:0000119!1.89e-08!312;UBERON:0001638!2.01e-08!9;UBERON:0003920!2.01e-08!9;UBERON:0004582!2.01e-08!9;UBERON:0000483!6.40e-08!309;UBERON:0000477!1.48e-07!286;UBERON:0003915!3.92e-07!9;UBERON:0004700!3.92e-07!9;UBERON:0001917!3.92e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.65e-20;15!UBERON:0000179;3.65e-20;15!UBERON:0000463;3.65e-20;15!UBERON:0004638;3.91e-20;18!UBERON:0001986;3.91e-20;18!UBERON:0004852;3.91e-20;18!UBERON:0000487;3.45e-16;22!UBERON:0006914;4.66e-14;25!UBERON:0005631;4.14e-12;10!UBERON:0000158;4.14e-12;10!UBERON:0000305;1.55e-11;7!UBERON:0000490;8.01e-10;33!UBERON:0000478;4.02e-09;24!UBERON:0001638;8.56e-09;9!UBERON:0003920;8.56e-09;9!UBERON:0004582;8.56e-09;9!UBERON:0003915;9.20e-09;9!UBERON:0004700;9.20e-09;9!UBERON:0001917;9.20e-09;9!UBERON:0002390;2.29e-08;32!UBERON:0007500;4.54e-07;56!UBERON:0001981;4.54e-07;56!UBERON:0004537;4.54e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.43e-20,18;UBERON:0001986,1.43e-20,18;UBERON:0004852,1.43e-20,18;UBERON:0000178,3.70e-20,15;UBERON:0000179,3.70e-20,15;UBERON:0000463,3.70e-20,15;UBERON:0000487,1.53e-16,22;UBERON:0005631,4.79e-16,14;UBERON:0000158,4.79e-16,14;UBERON:0004535,5.21e-15,109;UBERON:0001009,1.77e-14,112;UBERON:0006914,2.30e-14,25;UBERON:0003081,1.49e-12,203;UBERON:0000305,3.19e-11,7;UBERON:0003914,1.51e-10,117;UBERON:0004871,7.86e-10,8;UBERON:0000478,5.66e-09,24;UBERON:0001638,6.05e-09,9;UBERON:0003920,6.05e-09,9;UBERON:0004582,6.05e-09,9;UBERON:0003915,6.31e-09,9;UBERON:0004700,6.31e-09,9;UBERON:0001917,6.31e-09,9;UBERON:0000926,7.45e-09,315;UBERON:0004120,7.45e-09,315;UBERON:0006603,7.45e-09,315;UBERON:0004872,1.51e-08,83;UBERON:0000490,1.87e-08,148;UBERON:0007500,6.49e-08,59;UBERON:0001981,6.49e-08,59;UBERON:0004537,6.49e-08,59;UBERON:0006965,6.49e-08,59;UBERON:0003124,8.87e-07,7 | |||
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| ||
|short_description=p@chr20:36779336..36779341,- | |short_description=p@chr20:36779336..36779341,- | ||
}} | }} |
Latest revision as of 13:51, 28 July 2015
Short description: | p@chr20:36779336..36779341, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:36779336..36779341, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 1.43e-20 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.43e-20 | 18 |
endothelial cell | 5.22e-17 | 36 |
endothelial cell of vascular tree | 4.98e-15 | 24 |
vein endothelial cell | 2.23e-13 | 6 |
meso-epithelial cell | 4.14e-13 | 45 |
extraembryonic cell | 1.40e-11 | 19 |
amniotic epithelial cell | 2.46e-11 | 2 |
erythroid lineage cell | 1.04e-10 | 2 |
erythroblast | 1.04e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 1.04e-10 | 2 |
erythroid progenitor cell | 1.04e-10 | 2 |
reticulocyte | 1.04e-10 | 2 |
proerythroblast | 1.04e-10 | 2 |
basophilic erythroblast | 1.04e-10 | 2 |
polychromatophilic erythroblast | 1.04e-10 | 2 |
orthochromatic erythroblast | 1.04e-10 | 2 |
hepatic stem cell | 2.04e-10 | 2 |
hepatic mesenchymal stem cell | 2.04e-10 | 2 |
lining cell | 1.26e-09 | 58 |
barrier cell | 1.26e-09 | 58 |
endothelial cell of artery | 6.31e-09 | 9 |
aortic endothelial cell | 5.12e-08 | 6 |
placental epithelial cell | 1.26e-07 | 3 |
endothelial cell of umbilical vein | 1.99e-07 | 3 |