FFCP PHASE1:Hg19::chr13:22033392..22033510,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:22033392..22033510,-
|short_description=p1@ZDHHC20
|description=CAGE_peak_1_at_ZDHHC20_5end
|association_with_transcript=0bp_to_ENST00000320220,ENST000003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=253832 | |EntrezGene=253832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20749 | |HGNC=20749 | ||
|TSSclassifier=strong | |||
|UniProt=Q2TB82,Q5W0Z9,B4DRN8 | |UniProt=Q2TB82,Q5W0Z9,B4DRN8 | ||
|association_with_transcript=0bp_to_ENST00000320220,ENST00000382466,ENST00000400590,ENST00000415724,ENST00000422251,ENST00000542645,NM_153251,uc001uob.2,uc001uoc.2,uc001uod.2,uc001uoe.2,uc010tcs.1_5end | |||
|cluster_id=chr13:22033392..22033510,- | |||
|description=CAGE_peak_1_at_ZDHHC20_5end | |||
|id=chr13:22033392..22033510,- | |||
|ontology_enrichment_celltype=CL:0000766!2.50e-25!76;CL:0002057!6.55e-24!42;CL:0000860!2.62e-21!45;CL:0000557!2.20e-20!71;CL:0002194!3.47e-20!63;CL:0000576!3.47e-20!63;CL:0000040!3.47e-20!63;CL:0000559!3.47e-20!63;CL:0002009!2.72e-19!65;CL:0000839!9.69e-19!70;CL:0000738!1.48e-18!140;CL:0002087!8.87e-16!119;CL:0002031!3.84e-14!124;CL:0000037!2.19e-09!172;CL:0000566!2.19e-09!172;CL:0000763!5.73e-09!112;CL:0000049!5.73e-09!112;CL:0002032!2.94e-08!165;CL:0000837!2.94e-08!165;CL:0000988!4.61e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.66e-18;33!CL:0002057;1.66e-18;33!CL:0000473;2.85e-16;39!CL:0000234;2.85e-16;39!CL:0000576;1.85e-14;48!CL:0000766;1.66e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.60e-27,72;CL:0000473,1.36e-24,48;CL:0000234,1.36e-24,48;CL:0000860,6.55e-24,42;CL:0002057,6.55e-24,42;CL:0000557,9.26e-22,67;CL:0002194,1.02e-21,59;CL:0000576,1.02e-21,59;CL:0000040,1.02e-21,59;CL:0000559,1.02e-21,59;CL:0002009,1.02e-20,61;CL:0000839,4.97e-20,66;CL:0000738,3.23e-19,136;CL:0002087,1.91e-16,115;CL:0002031,1.00e-14,120;CL:0000037,1.09e-09,168;CL:0000763,2.16e-09,108;CL:0000049,2.16e-09,108;CL:0002032,1.54e-08,161;CL:0000837,1.54e-08,161;CL:0000988,2.37e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.49e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.48e-17!80;UBERON:0002390!1.18e-16!102;UBERON:0003061!1.18e-16!102;UBERON:0001474!1.84e-15!86;UBERON:0004765!3.29e-15!101;UBERON:0001434!3.29e-15!101;UBERON:0002193!1.71e-14!112;UBERON:0002405!1.71e-13!115;UBERON:0007023!2.20e-07!115;UBERON:0000062!2.69e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.08e-18,76;UBERON:0002390,1.84e-17,98;UBERON:0003061,1.84e-17,98;UBERON:0001474,2.39e-16,82;UBERON:0001434,9.82e-16,100;UBERON:0004765,1.57e-15,90;UBERON:0002405,1.58e-15,93;UBERON:0002193,3.79e-15,108;UBERON:0007023,3.94e-07,114 | |||
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| ||
|short_description=p1@ZDHHC20 | |||
}} | }} |
Latest revision as of 19:59, 16 September 2015
Short description: | p1@ZDHHC20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZDHHC20_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000320220, ENST00000382466, ENST00000400590, ENST00000415724, ENST00000422251, ENST00000542645, NM_153251, uc001uob.2, uc001uoc.2, uc001uod.2, uc001uoe.2, uc010tcs.1_5end |
EntrezGene: | ZDHHC20 |
HGNC: | 20749 |
UniProt: | Q2TB82Q5W0Z9B4DRN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.60e-27 | 72 |
defensive cell | 1.36e-24 | 48 |
phagocyte | 1.36e-24 | 48 |
classical monocyte | 6.55e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.55e-24 | 42 |
granulocyte monocyte progenitor cell | 9.26e-22 | 67 |
monopoietic cell | 1.02e-21 | 59 |
monocyte | 1.02e-21 | 59 |
monoblast | 1.02e-21 | 59 |
promonocyte | 1.02e-21 | 59 |
macrophage dendritic cell progenitor | 1.02e-20 | 61 |
myeloid lineage restricted progenitor cell | 4.97e-20 | 66 |
leukocyte | 3.23e-19 | 136 |
nongranular leukocyte | 1.91e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 1.00e-14 | 120 |
hematopoietic stem cell | 1.09e-09 | 168 |
myeloid cell | 2.16e-09 | 108 |
common myeloid progenitor | 2.16e-09 | 108 |
hematopoietic oligopotent progenitor cell | 1.54e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.54e-08 | 161 |
hematopoietic cell | 2.37e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.08e-18 | 76 |
hematopoietic system | 1.84e-17 | 98 |
blood island | 1.84e-17 | 98 |
bone element | 2.39e-16 | 82 |
skeletal system | 9.82e-16 | 100 |
skeletal element | 1.57e-15 | 90 |
immune system | 1.58e-15 | 93 |
hemolymphoid system | 3.79e-15 | 108 |
adult organism | 3.94e-07 | 114 |