FFCP PHASE1:Hg19::chr6:43858766..43858801,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100132354 | |EntrezGene=100132354 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_NR_024478,uc011dvm.1_5end | |association_with_transcript=1bp_to_NR_024478,uc011dvm.1_5end | ||
|cluster_id=chr6:43858766..43858801,+ | |||
|coexpression_cluster_id=C101 | |||
|description=CAGE_peak_1_at_LOC100132354_5end | |description=CAGE_peak_1_at_LOC100132354_5end | ||
|id=chr6:43858766..43858801,+ | |id=chr6:43858766..43858801,+ | ||
|ontology_enrichment_celltype=CL:0002322!8.51e-11!5 | |ontology_enrichment_celltype=CL:0002322!8.51e-11!5 | ||
|ontology_enrichment_celltype_v019=CL:0000123;5.19e-08;2!CL:0000242;5.19e-08;2!CL:0002253;7.52e-08;2!CL:0002535;7.52e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.02e-08,2;CL:0002535,8.04e-08,2;CL:0002253,9.19e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5409!1.51e-08!4;DOID:3095!2.31e-08!22;DOID:2994!2.31e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3119;1.81e-15;14!DOID:0050619;5.42e-15;1!DOID:1357;5.42e-15;1!DOID:5409;2.26e-14;4!DOID:1325;1.32e-08;7!DOID:3904;1.32e-08;7!DOID:0050615;3.60e-08;16!DOID:3493;5.19e-08;2!DOID:3905;7.00e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,2.22e-15,14;DOID:0050619,5.42e-15,1;DOID:1357,5.42e-15,1;DOID:5409,2.26e-14,4;DOID:1325,1.32e-08,7;DOID:3904,1.32e-08,7;DOID:0050615,3.60e-08,16;DOID:3493,5.37e-08,2;DOID:305,2.87e-07,106;DOID:3905,7.00e-07,9;DOID:0050686,8.45e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001869!1.66e-18!32;UBERON:0002619!7.01e-18!22;UBERON:0001893!3.04e-17!34;UBERON:0001950!1.67e-16!20;UBERON:0002791!1.59e-15!33;UBERON:0000956!1.66e-15!25;UBERON:0000203!1.66e-15!25;UBERON:0002020!5.47e-15!34;UBERON:0003528!5.47e-15!34;UBERON:0001871!2.89e-14!7;UBERON:0002780!8.94e-14!41;UBERON:0001890!8.94e-14!41;UBERON:0006240!8.94e-14!41;UBERON:0003080!2.26e-13!42;UBERON:0000073!4.27e-13!94;UBERON:0001016!4.27e-13!94;UBERON:0001017!5.68e-13!82;UBERON:0005743!3.86e-12!86;UBERON:0001049!7.19e-12!57;UBERON:0005068!7.19e-12!57;UBERON:0006241!7.19e-12!57;UBERON:0007135!7.19e-12!57;UBERON:0000955!1.19e-11!69;UBERON:0006238!1.19e-11!69;UBERON:0002616!2.43e-11!59;UBERON:0000349!7.28e-11!5;UBERON:0002346!4.06e-09!90;UBERON:0003056!3.09e-08!61;UBERON:0001876!9.75e-08!2;UBERON:0003075!1.28e-07!86;UBERON:0007284!1.28e-07!86;UBERON:0000924!9.56e-07!173;UBERON:0006601!9.56e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;5.42e-15;1!UBERON:0001825;5.42e-15;1!UBERON:0001871;2.07e-08;6!UBERON:0001876;7.52e-08;2!UBERON:0006955;7.52e-08;2!UBERON:0004801;7.52e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,5.42e-15,1;UBERON:0001825,5.42e-15,1;UBERON:0001871,1.85e-08,6;UBERON:0001876,6.58e-08,2;UBERON:0006955,8.04e-08,2;UBERON:0004801,8.04e-08,2 | |||
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| ||
|short_description=p1@LOC100132354 | |short_description=p1@LOC100132354 | ||
}} | }} |
Latest revision as of 23:11, 18 September 2015
Short description: | p1@LOC100132354 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100132354_5end |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | 1bp_to_NR_024478, uc011dvm.1_5end |
EntrezGene: | LOC100132354 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.02e-08 | 2 |
epithelial cell of cervix | 8.04e-08 | 2 |
epithelial cell of large intestine | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 5.42e-15 | 1 |
paranasal sinus | 5.42e-15 | 1 |
temporal lobe | 1.85e-08 | 6 |
amygdala | 6.58e-08 | 2 |
uterine epithelium | 8.04e-08 | 2 |
cervix epithelium | 8.04e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 2.22e-15 | 14 |
paranasal sinus cancer | 5.42e-15 | 1 |
maxillary sinus cancer | 5.42e-15 | 1 |
lung small cell carcinoma | 2.26e-14 | 4 |
bronchus cancer | 1.32e-08 | 7 |
bronchogenic carcinoma | 1.32e-08 | 7 |
respiratory system cancer | 3.60e-08 | 16 |
signet ring cell adenocarcinoma | 5.37e-08 | 2 |
carcinoma | 2.87e-07 | 106 |
lung carcinoma | 7.00e-07 | 9 |
organ system cancer | 8.45e-07 | 137 |