FFCP PHASE1:Hg19::chr20:62669377..62669398,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=27655 | |HGNC=27655 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-86bp_to_ENST00000463337_5end | |association_with_transcript=-86bp_to_ENST00000463337_5end | ||
|cluster_id=chr20:62669377..62669398,+ | |||
|description=CAGE_peak_5_at_LINC00176_5end | |description=CAGE_peak_5_at_LINC00176_5end | ||
|id=chr20:62669377..62669398,+ | |id=chr20:62669377..62669398,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.67e-14!24;CL:0000115!2.35e-13!35;CL:0000071!4.93e-13!18;CL:0002546!4.93e-13!18;CL:0002078!1.48e-09!44;CL:0002144!5.46e-07!3;CL:0002618!5.57e-07!3 | |ontology_enrichment_celltype=CL:0002139!1.67e-14!24;CL:0000115!2.35e-13!35;CL:0000071!4.93e-13!18;CL:0002546!4.93e-13!18;CL:0002078!1.48e-09!44;CL:0002144!5.46e-07!3;CL:0002618!5.57e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000071;2.81e-24;18!CL:0002139;3.73e-18;24!CL:0002618;1.51e-17;3!CL:0002144;2.49e-17;3!CL:0000115;5.54e-14;36!CL:0002078;1.05e-13;45!CL:0002543;3.02e-09;6!CL:0000213;1.40e-07;58!CL:0000215;1.40e-07;58!CL:0002262;1.87e-07;2!CL:0002545;1.87e-07;2!CL:1000398;1.87e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,2.70e-24,18;CL:0002546,2.70e-24,18;CL:0000115,3.91e-21,36;CL:0002139,3.62e-18,24;CL:0002618,1.39e-17,3;CL:0002144,1.64e-17,3;CL:0002078,9.21e-17,45;CL:0000213,7.83e-13,58;CL:0000215,7.83e-13,58;CL:0002543,2.89e-09,6;CL:0002262,1.75e-07,2;CL:1000398,1.75e-07,2;CL:0002545,2.12e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.26e-38;3!CL:0002546;2.81e-24;18!UBERON:0000358;3.73e-14;1!UBERON:0008425;3.73e-14;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!4.93e-13!18;UBERON:0004638!4.93e-13!18;UBERON:0004852!4.93e-13!18;UBERON:0000487!7.81e-12!22;UBERON:0006914!5.51e-10!25;UBERON:0007023!1.56e-09!115;UBERON:0001915!5.46e-07!3;UBERON:0001982!5.46e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.81e-24;18!UBERON:0001986;2.81e-24;18!UBERON:0004852;2.81e-24;18!UBERON:0000487;7.95e-20;22!UBERON:0002037;1.10e-19;6!UBERON:0006914;2.03e-17;25!UBERON:0010523;2.49e-17;3!UBERON:0001915;2.49e-17;3!UBERON:0001982;2.49e-17;3!UBERON:0002680;2.47e-13;9!UBERON:0001895;2.47e-13;9!UBERON:0000490;1.13e-11;33!UBERON:0002066;6.46e-11;5!UBERON:0004733;3.83e-10;12!UBERON:0002028;3.83e-10;12!UBERON:0004732;2.10e-09;13!UBERON:0001281;1.87e-07;2!UBERON:0003497;1.87e-07;2!UBERON:0003909;1.87e-07;2!UBERON:0005800;1.87e-07;2!UBERON:0003835;1.87e-07;2!UBERON:0001515;1.87e-07;2!UBERON:0007500;5.77e-07;56!UBERON:0001981;5.77e-07;56!UBERON:0004537;5.77e-07;56!UBERON:0000055;5.96e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.70e-24,18;UBERON:0001986,2.70e-24,18;UBERON:0004852,2.70e-24,18;UBERON:0000487,7.69e-20,22;UBERON:0002037,1.33e-19,6;UBERON:0006215,1.33e-19,6;UBERON:0010523,1.64e-17,3;UBERON:0001915,1.64e-17,3;UBERON:0001982,1.64e-17,3;UBERON:0006914,1.97e-17,25;UBERON:0002680,2.80e-13,9;UBERON:0001895,2.80e-13,9;UBERON:0010092,2.80e-13,9;UBERON:0002066,6.15e-11,5;UBERON:0004733,4.21e-10,12;UBERON:0002028,4.21e-10,12;UBERON:0007277,4.21e-10,12;UBERON:0007500,1.14e-09,59;UBERON:0001981,1.14e-09,59;UBERON:0004537,1.14e-09,59;UBERON:0006965,1.14e-09,59;UBERON:0004732,2.29e-09,13;UBERON:0000055,2.62e-08,68;UBERON:0003076,3.47e-08,15;UBERON:0003057,3.47e-08,15;UBERON:0001281,1.75e-07,2;UBERON:0003497,1.75e-07,2;UBERON:0003909,1.75e-07,2;UBERON:0003835,1.75e-07,2;UBERON:0005800,2.12e-07,2;UBERON:0001515,2.12e-07,2;UBERON:0002049,3.65e-07,78;UBERON:0007798,3.65e-07,78 | |||
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| ||
|short_description=p5@LINC00176 | |short_description=p5@LINC00176 | ||
}} | }} |
Latest revision as of 15:10, 17 September 2015
Short description: | p5@LINC00176 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LINC00176_5end |
Coexpression cluster: | NA |
Association with transcript: | -86bp_to_ENST00000463337_5end |
EntrezGene: | NA |
HGNC: | 27655 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 2.70e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.70e-24 | 18 |
endothelial cell | 3.91e-21 | 36 |
endothelial cell of vascular tree | 3.62e-18 | 24 |
endothelial cell of umbilical vein | 1.39e-17 | 3 |
capillary endothelial cell | 1.64e-17 | 3 |
meso-epithelial cell | 9.21e-17 | 45 |
lining cell | 7.83e-13 | 58 |
barrier cell | 7.83e-13 | 58 |
vein endothelial cell | 2.89e-09 | 6 |
endothelial cell of sinusoid | 1.75e-07 | 2 |
endothelial cell of hepatic sinusoid | 1.75e-07 | 2 |
thoracic aorta endothelial cell | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.70e-24 | 18 |
endothelium | 2.70e-24 | 18 |
cardiovascular system endothelium | 2.70e-24 | 18 |
simple squamous epithelium | 7.69e-20 | 22 |
cerebellum | 1.33e-19 | 6 |
rhombic lip | 1.33e-19 | 6 |
microcirculatory vessel | 1.64e-17 | 3 |
endothelium of capillary | 1.64e-17 | 3 |
capillary | 1.64e-17 | 3 |
squamous epithelium | 1.97e-17 | 25 |
regional part of metencephalon | 2.80e-13 | 9 |
metencephalon | 2.80e-13 | 9 |
future metencephalon | 2.80e-13 | 9 |
umbilical vein | 6.15e-11 | 5 |
segmental subdivision of hindbrain | 4.21e-10 | 12 |
hindbrain | 4.21e-10 | 12 |
presumptive hindbrain | 4.21e-10 | 12 |
epithelial tube open at both ends | 1.14e-09 | 59 |
blood vessel | 1.14e-09 | 59 |
blood vasculature | 1.14e-09 | 59 |
vascular cord | 1.14e-09 | 59 |
segmental subdivision of nervous system | 2.29e-09 | 13 |
vessel | 2.62e-08 | 68 |
posterior neural tube | 3.47e-08 | 15 |
chordal neural plate | 3.47e-08 | 15 |
hepatic sinusoid | 1.75e-07 | 2 |
abdomen blood vessel | 1.75e-07 | 2 |
sinusoid | 1.75e-07 | 2 |
abdominal segment blood vessel | 1.75e-07 | 2 |
segment of aorta | 2.12e-07 | 2 |
thoracic aorta | 2.12e-07 | 2 |
vasculature | 3.65e-07 | 78 |
vascular system | 3.65e-07 | 78 |