FFCP PHASE1:Hg19::chr13:38164609..38164645,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:38164609..38164645,-
|short_description=p@chr13:38164609..38164645,-
|description=CAGE_peak_at_chr13:38164609..38164645,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:38164609..38164645,- | |||
|coexpression_cluster_id=C349 | |||
|description=CAGE_peak_at_chr13:38164609..38164645,- | |||
|id=chr13:38164609..38164645,- | |||
|ontology_enrichment_celltype=CL:0000055!2.65e-28!180;CL:0000680!8.19e-18!57;CL:0000056!8.19e-18!57;CL:0000355!8.19e-18!57;CL:0000057!3.31e-17!75;CL:0000187!7.07e-16!54;CL:0000183!1.47e-14!59;CL:0000393!3.66e-13!60;CL:0000211!3.66e-13!60;CL:0002494!5.85e-12!16;CL:0002334!3.08e-11!12;CL:0000048!2.23e-10!430;CL:0000723!3.61e-10!436;CL:0000034!9.90e-10!444;CL:0000192!1.65e-09!42;CL:0000514!1.65e-09!42;CL:0000222!4.61e-09!119;CL:0000359!2.14e-08!32;CL:0002548!8.76e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.00e-15;12!CL:0002494;1.68e-13;16!CL:0002548;1.81e-10;6!CL:1000306;1.03e-09;4!CL:0002547;1.03e-09;4!CL:0002580;1.69e-08;3!CL:0002579;4.34e-08;3!CL:0000746;4.96e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.42e-15,12;CL:0000057,1.72e-14,76;CL:0002494,2.17e-13,16;CL:0002548,1.58e-10,6;CL:1000306,1.10e-09,4;CL:0002547,1.10e-09,4;CL:0002580,1.46e-08,3;CL:0002579,5.61e-08,3;CL:0000746,7.65e-08,3;CL:0000513,7.65e-08,3;CL:0000680,3.10e-07,58;CL:0000056,3.10e-07,58;CL:0000355,3.10e-07,58;CL:0000048,5.51e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000513;4.96e-08;3 | |||
|ontology_enrichment_disease=DOID:2394!7.39e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.71e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.53e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!3.40e-17!61;UBERON:0002036!3.40e-17!61;UBERON:0003082!3.40e-17!61;UBERON:0002385!4.06e-17!63;UBERON:0001015!4.06e-17!63;UBERON:0000383!4.06e-17!63;UBERON:0000914!5.64e-14!83;UBERON:0002329!5.64e-14!83;UBERON:0003077!5.64e-14!83;UBERON:0003059!5.64e-14!83;UBERON:0007282!5.64e-14!83;UBERON:0009618!5.64e-14!83;UBERON:0007285!5.64e-14!83;UBERON:0004290!2.26e-13!70;UBERON:0000948!1.25e-12!24;UBERON:0005498!1.25e-12!24;UBERON:0004140!1.25e-12!24;UBERON:0009881!1.25e-12!24;UBERON:0004141!1.25e-12!24;UBERON:0003084!1.25e-12!24;UBERON:0007005!1.25e-12!24;UBERON:0004139!1.25e-12!24;UBERON:0004291!1.25e-12!24;UBERON:0004872!4.07e-12!84;UBERON:0007100!1.13e-11!27;UBERON:0001637!5.15e-11!42;UBERON:0003509!5.15e-11!42;UBERON:0004572!5.15e-11!42;UBERON:0000486!2.31e-10!82;UBERON:0004573!5.68e-10!33;UBERON:0004571!5.68e-10!33;UBERON:0004535!1.10e-09!110;UBERON:0001009!1.33e-09!113;UBERON:0005256!2.21e-08!143;UBERON:0000490!5.12e-08!138;UBERON:0003914!1.12e-07!118;UBERON:0001981!1.44e-07!60;UBERON:0007500!1.44e-07!60;UBERON:0004537!1.44e-07!60;UBERON:0006965!1.44e-07!60;UBERON:0002049!1.91e-07!79;UBERON:0007798!1.91e-07!79;UBERON:0000055!3.20e-07!69;UBERON:0002100!8.67e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.03e-09;4!UBERON:0000415;1.03e-09;4!UBERON:0007240;1.03e-09;4!UBERON:0005742;1.03e-09;4!UBERON:0005734;1.03e-09;4!UBERON:0004664;1.03e-09;4!UBERON:0004663;1.03e-09;4!UBERON:0000948;3.25e-09;22!UBERON:0004573;2.85e-08;33!UBERON:0004571;2.85e-08;33!UBERON:0007100;7.47e-08;25!UBERON:0001637;9.89e-07;42!UBERON:0003509;9.89e-07;42!UBERON:0004572;9.89e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,5.48e-10,24;UBERON:0005498,5.48e-10,24;UBERON:0004140,5.48e-10,24;UBERON:0009881,5.48e-10,24;UBERON:0004141,5.48e-10,24;UBERON:0003084,5.48e-10,24;UBERON:0007005,5.48e-10,24;UBERON:0004139,5.48e-10,24;UBERON:0004291,5.48e-10,24;UBERON:0000415,1.10e-09,4;UBERON:0007240,1.10e-09,4;UBERON:0005742,1.10e-09,4;UBERON:0005734,1.10e-09,4;UBERON:0004664,1.10e-09,4;UBERON:0004663,1.10e-09,4;UBERON:0004573,5.90e-09,33;UBERON:0004571,5.90e-09,33;UBERON:0007100,1.32e-08,27;UBERON:0004872,4.21e-08,83;UBERON:0001637,1.33e-07,42;UBERON:0003509,1.33e-07,42;UBERON:0004572,1.33e-07,42;UBERON:0001134,1.37e-07,62;UBERON:0002036,1.37e-07,62;UBERON:0003082,1.37e-07,62;UBERON:0002385,3.17e-07,64;UBERON:0001015,3.17e-07,64;UBERON:0000383,3.17e-07,64;UBERON:0007524,9.36e-07,73 | |||
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| ||
|short_description=p@chr13:38164609..38164645,- | |||
}} | }} |
Latest revision as of 15:53, 24 July 2015
Short description: | p@chr13:38164609..38164645, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:38164609..38164645, - |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.42e-15 | 12 |
fibroblast | 1.72e-14 | 76 |
cardiocyte | 2.17e-13 | 16 |
cardiac fibroblast | 1.58e-10 | 6 |
fibroblast of tunica adventitia of artery | 1.10e-09 | 4 |
fibroblast of the aortic adventitia | 1.10e-09 | 4 |
preadipocyte of the breast | 1.46e-08 | 3 |
omentum preadipocyte | 5.61e-08 | 3 |
cardiac muscle cell | 7.65e-08 | 3 |
cardiac muscle myoblast | 7.65e-08 | 3 |
muscle precursor cell | 3.10e-07 | 58 |
myoblast | 3.10e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.10e-07 | 58 |
multi fate stem cell | 5.51e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
heart | 5.48e-10 | 24 |
primitive heart tube | 5.48e-10 | 24 |
primary heart field | 5.48e-10 | 24 |
anterior lateral plate mesoderm | 5.48e-10 | 24 |
heart tube | 5.48e-10 | 24 |
heart primordium | 5.48e-10 | 24 |
cardiac mesoderm | 5.48e-10 | 24 |
cardiogenic plate | 5.48e-10 | 24 |
heart rudiment | 5.48e-10 | 24 |
artery wall | 1.10e-09 | 4 |
tunica adventitia of artery | 1.10e-09 | 4 |
adventitia | 1.10e-09 | 4 |
tunica adventitia of blood vessel | 1.10e-09 | 4 |
aorta tunica adventitia | 1.10e-09 | 4 |
aorta wall | 1.10e-09 | 4 |
systemic artery | 5.90e-09 | 33 |
systemic arterial system | 5.90e-09 | 33 |
primary circulatory organ | 1.32e-08 | 27 |
splanchnic layer of lateral plate mesoderm | 4.21e-08 | 83 |
artery | 1.33e-07 | 42 |
arterial blood vessel | 1.33e-07 | 42 |
arterial system | 1.33e-07 | 42 |
skeletal muscle tissue | 1.37e-07 | 62 |
striated muscle tissue | 1.37e-07 | 62 |
myotome | 1.37e-07 | 62 |
muscle tissue | 3.17e-07 | 64 |
musculature | 3.17e-07 | 64 |
musculature of body | 3.17e-07 | 64 |
dense mesenchyme tissue | 9.36e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.53e-07 | 14 |