FFCP PHASE1:Hg19::chr7:134832914..134832927,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55281 | |EntrezGene=55281 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21870 | |HGNC=21870 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000466307_5end | |association_with_transcript=-19bp_to_ENST00000466307_5end | ||
|cluster_id=chr7:134832914..134832927,+ | |||
|description=CAGE_peak_4_at_TMEM140_5end | |description=CAGE_peak_4_at_TMEM140_5end | ||
|id=chr7:134832914..134832927,+ | |id=chr7:134832914..134832927,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.57e-20!140;CL:0002087!1.49e-17!119;CL:0002057!1.45e-16!42;CL:0000766!1.18e-15!76;CL:0002031!2.42e-15!124;CL:0000860!2.27e-14!45;CL:0002194!4.61e-13!63;CL:0000576!4.61e-13!63;CL:0000040!4.61e-13!63;CL:0000559!4.61e-13!63;CL:0000839!1.04e-12!70;CL:0000037!1.43e-12!172;CL:0000566!1.43e-12!172;CL:0002009!4.10e-12!65;CL:0002032!7.80e-12!165;CL:0000837!7.80e-12!165;CL:0000557!9.60e-12!71;CL:0000988!7.30e-11!182;CL:0002139!3.44e-09!24;CL:0000763!1.02e-07!112;CL:0000049!1.02e-07!112;CL:0000115!1.17e-07!35 | |ontology_enrichment_celltype=CL:0000738!5.57e-20!140;CL:0002087!1.49e-17!119;CL:0002057!1.45e-16!42;CL:0000766!1.18e-15!76;CL:0002031!2.42e-15!124;CL:0000860!2.27e-14!45;CL:0002194!4.61e-13!63;CL:0000576!4.61e-13!63;CL:0000040!4.61e-13!63;CL:0000559!4.61e-13!63;CL:0000839!1.04e-12!70;CL:0000037!1.43e-12!172;CL:0000566!1.43e-12!172;CL:0002009!4.10e-12!65;CL:0002032!7.80e-12!165;CL:0000837!7.80e-12!165;CL:0000557!9.60e-12!71;CL:0000988!7.30e-11!182;CL:0002139!3.44e-09!24;CL:0000763!1.02e-07!112;CL:0000049!1.02e-07!112;CL:0000115!1.17e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.43e-12;33!CL:0002057;1.43e-12;33!CL:0000576;1.74e-10;48!CL:0000473;3.86e-09;39!CL:0000234;3.86e-09;39!CL:0000766;5.38e-08;69!CL:0002139;1.92e-07;24!CL:0000775;5.90e-07;3!CL:0002138;6.88e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.24e-18,42;CL:0002057,2.24e-18,42;CL:0000738,4.01e-17,136;CL:0000473,1.09e-16,48;CL:0000234,1.09e-16,48;CL:0002087,4.30e-15,115;CL:0000766,1.01e-14,72;CL:0002194,6.67e-13,59;CL:0000576,6.67e-13,59;CL:0000040,6.67e-13,59;CL:0000559,6.67e-13,59;CL:0002031,2.91e-12,120;CL:0002009,3.06e-12,61;CL:0000037,2.80e-11,168;CL:0002032,6.35e-11,161;CL:0000837,6.35e-11,161;CL:0000839,9.02e-11,66;CL:0000557,1.66e-10,67;CL:0000988,4.68e-10,177;CL:0000763,2.34e-08,108;CL:0000049,2.34e-08,108;CL:0002139,2.60e-07,24;CL:0000775,5.71e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;9.08e-14;42!CL:0005022;6.88e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.78e-24!115;UBERON:0002193!4.49e-17!112;UBERON:0002390!1.98e-14!102;UBERON:0003061!1.98e-14!102;UBERON:0002405!6.49e-13!115;UBERON:0002371!3.59e-10!80;UBERON:0001474!5.15e-09!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.80e-14,108;UBERON:0002390,1.12e-11,98;UBERON:0003061,1.12e-11,98;UBERON:0002405,8.12e-11,93;UBERON:0002371,1.89e-08,76;UBERON:0001474,2.37e-07,82 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.704772020479856,1.0007329835313,0.446961094427288,0.872338524100369,2.53299878168311,0.631719873426831,0.783556884599516,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.410502947249729,0.393553906568396,0.393364276848904,1.15148819429164,0.309632246632152,0,0,0,0.232401601740905,0.142169232487422,0.293600439334847,0,0.401088894940283,0.217010870715852,0.447830948479849,0.647787332037959,0.77272670290256,1.16318591023652,1.13362783106643,0.970336244751265,0.464858073811369,0,1.23882548358041,3.74000110018796,1.2808035326455,3.31075121844019,1.37898272294647,0.645484683583826,0,0.564727018627814,1.09162460023138,1.57306439111559,0,1.28371610830437,1.27867425159808,5.27762080298746,8.57693727773017,6.39337125799041,0.290209238628584,0.56738522469114,0.622822248995575,4.27122730936464,2.60741459210101,4.34377689410233,0.605399502633369,0.736555271975129,1.26584954976354,2.32380814943136,1.27562579979026,2.09658645508376,1.12328631146495,0.600707571366025,0.803627933485401,2.56511469367124,2.18808344918999,2.19196984517561,0,0,0.889509253863555,0.426730222566507,2.00197993518006,0,1.32208974556972,0,2.84606484554724,1.76171156811282,3.44045905312706,3.96513985737078,1.68152568894461,0,2.75393678159366,1.17903228824749,0.205601498999509,0.167186495390678,0.32592226663359,0.946895611469467,0,0.779873198196215,0.294605907474837,1.32920336750173,1.35401931882508,0.768547918354051,1.1705341280389,0.493313713811028,0.276350017785848,0.289803085735052,1.77943875794473,3.47803076516627,0,0.113309342697566,1.14966148080576,1.71813722741315,2.53019692019503,0.95569624297229,0,2.85135613334512,0.752875595388864,0.383959833463255,0,0.236777252044017,0,1.41124720257313,0.802320587350522,1.01377082717959,0,0,0,0,0,0,0,0.486634870302636,0,0,0,1.30979075497713,0,0,0.324547393654683,0.870648686496336,1.19662164466979,0,0,0.371457501329565,0.993812036833525,2.58070378531837,0.347140501607594,1.69592382577203,1.67799774483962,0.825354125820202,0.208994966536811,1.03366703667732,1.77883131343355,1.00416183829401,3.22263453687318,3.80136052859256,1.22031028774085,0.735326160691737,0,0.446498641420399,1.12264686313085,0.337834441449967,0,0.949265659568129,0.183201743930407,1.31780417436063,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,2.02113026865503,0.925971025153221,3.42457474022277,0,0,0.492434012174795,0.702012795417713,0.297262324577456,0,0,0,0,0,0,0,0.264145302039678,0.414656231081544,0.432359860250884,0.12624243342638,1.14296209725904,0.381988425558278,4.68869788840188,1.71072446022705,0.514137463516618,0.901029173531752,2.85826432630578,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,1.37921532141349,0.431255149719035,1.41177339907723,0,0,0,0,0,3.74503511973591,5.9832291840805,9.11714129559278,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0.260650843404249,0.391602314925481,0,1.24060815673732,1.72571360654893,0.640365346820666,0,0,0,0,0.153461973288062,0,0.384417447767103,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0.114814448164607,0.182091168006717,1.44236856455367,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,3.08454505380579,0,0,0,0,0,0,0.261435451024901,0,0,0,1.23649213977267,0.27470839445503,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0.731140468893853,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,1.60044461320525,0,0,0,0,1.52234282769651,1.52927441428475,0.569647187174163,0.952927101831156,2.46817363851717,1.94541993357815,0.540031437238115,2.37937552888281,0,0,0,0.371606350251437,0,0.0711418433484141,0,0.199579371432817,0,0.846694330895531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,3.80921266106924,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.996239941255349,0.276283915531148,0,0,1.23084805461069,0,0,0.179021174675609,0,0.986434056369336,0,0,0.969332746095218,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0,0.219385397153973,0,0,0.615602068030377,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0.995261931078505,0.619202951523374,0.611030144933625,0,0,0,1.34802265961354,0,0.702793337176017,0,0,0,0.394584402849391,0,0,1.64285107034069,0.450970258243478,0,0,0.661983911750998,0,0,0.569219092059585,0.138674673013139,0,0,0,0.873633341210151,0.343972064943233,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.126621591911757,0,0,0.426905989478705,0.19980960958213,0,0,0,0,0,0,0,0,0,0,1.20084057741958,1.36905378891993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| ||
|short_description=p4@TMEM140 | |short_description=p4@TMEM140 | ||
}} | }} |
Latest revision as of 12:52, 16 September 2015
Short description: | p4@TMEM140 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TMEM140_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000466307_5end |
EntrezGene: | TMEM140 |
HGNC: | 21870 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.24e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.24e-18 | 42 |
leukocyte | 4.01e-17 | 136 |
defensive cell | 1.09e-16 | 48 |
phagocyte | 1.09e-16 | 48 |
nongranular leukocyte | 4.30e-15 | 115 |
myeloid leukocyte | 1.01e-14 | 72 |
monopoietic cell | 6.67e-13 | 59 |
monocyte | 6.67e-13 | 59 |
monoblast | 6.67e-13 | 59 |
promonocyte | 6.67e-13 | 59 |
hematopoietic lineage restricted progenitor cell | 2.91e-12 | 120 |
macrophage dendritic cell progenitor | 3.06e-12 | 61 |
hematopoietic stem cell | 2.80e-11 | 168 |
hematopoietic oligopotent progenitor cell | 6.35e-11 | 161 |
hematopoietic multipotent progenitor cell | 6.35e-11 | 161 |
myeloid lineage restricted progenitor cell | 9.02e-11 | 66 |
granulocyte monocyte progenitor cell | 1.66e-10 | 67 |
hematopoietic cell | 4.68e-10 | 177 |
myeloid cell | 2.34e-08 | 108 |
common myeloid progenitor | 2.34e-08 | 108 |
endothelial cell of vascular tree | 2.60e-07 | 24 |
neutrophil | 5.71e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.80e-14 | 108 |
hematopoietic system | 1.12e-11 | 98 |
blood island | 1.12e-11 | 98 |
immune system | 8.12e-11 | 93 |
bone marrow | 1.89e-08 | 76 |
bone element | 2.37e-07 | 82 |