FFCP PHASE1:Hg19::chr7:150038689..150038692,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5919 | |EntrezGene=5919 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9868 | |HGNC=9868 | ||
|TSSclassifier=strong | |||
|UniProt=Q99969 | |UniProt=Q99969 | ||
|association_with_transcript=39bp_to_ENST00000466675_5end | |association_with_transcript=39bp_to_ENST00000466675_5end | ||
|cluster_id=chr7:150038689..150038692,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_RARRES2_5end | |description=CAGE_peak_3_at_RARRES2_5end | ||
|id=chr7:150038689..150038692,- | |id=chr7:150038689..150038692,- | ||
|ontology_enrichment_celltype=CL:0000136!6.14e-08!15 | |ontology_enrichment_celltype=CL:0000136!6.14e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;4.74e-15;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.97e-13,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.45e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.14e-20;14!DOID:120;1.80e-09;27!DOID:193;1.20e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.37e-20,14;DOID:120,1.97e-09,27;DOID:193,1.30e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.45e-15!115;UBERON:0002107!4.69e-12!19;UBERON:0006925!4.69e-12!19;UBERON:0008836!4.69e-12!19;UBERON:0009854!1.79e-10!23;UBERON:0005057!2.02e-10!26;UBERON:0000466!6.48e-10!126;UBERON:0002417!7.26e-10!61;UBERON:0000916!7.26e-10!61;UBERON:0008835!1.15e-09!22;UBERON:0003894!1.15e-09!22;UBERON:0009856!1.31e-09!26;UBERON:0009497!3.32e-09!25;UBERON:0000015!3.32e-09!25;UBERON:0002423!3.32e-09!25;UBERON:0006235!3.32e-09!25;UBERON:0004161!3.32e-09!25;UBERON:0004921!7.13e-09!129;UBERON:0004185!7.13e-09!129;UBERON:0007499!7.49e-09!25;UBERON:0001048!8.03e-09!168;UBERON:0002368!8.67e-09!35;UBERON:0002323!2.04e-08!46;UBERON:0009569!2.93e-08!113;UBERON:0004458!3.28e-08!49;UBERON:0003929!1.56e-07!54;UBERON:0002100!1.76e-07!216;UBERON:0002530!7.14e-07!59;UBERON:0000949!7.84e-07!45;UBERON:0003688!9.00e-07!6;UBERON:0002358!9.00e-07!6;UBERON:0003684!9.00e-07!6;UBERON:0001178!9.00e-07!6;UBERON:0002118!9.60e-07!5;UBERON:0004532!9.60e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;1.22e-14;13!UBERON:0002118;2.30e-13;5!UBERON:0000991;1.97e-10;21!UBERON:0002107;4.16e-10;19!UBERON:0006925;4.16e-10;19!UBERON:0002423;6.51e-09;25!UBERON:0004458;2.29e-07;48!UBERON:0002323;6.15e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.57e-14,13;UBERON:0002118,2.57e-13,5;UBERON:0002323,7.08e-12,46;UBERON:0004458,6.92e-11,49;UBERON:0000991,2.30e-10,21;UBERON:0009196,2.30e-10,21;UBERON:0009117,2.30e-10,21;UBERON:0005564,2.30e-10,21;UBERON:0002107,3.82e-10,19;UBERON:0006925,3.82e-10,19;UBERON:0008836,3.82e-10,19;UBERON:0009854,7.44e-10,23;UBERON:0004176,8.52e-10,22;UBERON:0003886,1.73e-09,54;UBERON:0009497,6.33e-09,25;UBERON:0000015,6.33e-09,25;UBERON:0002423,6.33e-09,25;UBERON:0006235,6.33e-09,25;UBERON:0004161,6.33e-09,25;UBERON:0008835,1.68e-08,22;UBERON:0003894,1.68e-08,22;UBERON:0009856,1.83e-08,26;UBERON:0002553,6.22e-08,61;UBERON:0007499,2.94e-07,25;UBERON:0005156,6.65e-07,59;UBERON:0000990,6.65e-07,59 | |||
|phase1_expression=0.54503513781167,1.2846031433459,0.986680828671798,4.00293193412522,10.2801051718276,2.61701557230111,15.1979926900986,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,2.19418305034661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.511450247374121,0,0,0.144846518960824,0,0,0.283604451492204,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860509862246441,0,0,0,0,0.311211035399766,0.404132016209064,0.163461903113459,0.605429710579726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09776335516636,0.927708378250397,0.232387885739037,0.207322110030741,0,1.45990943630332,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0.8231480226628,1.47008711385542,41.8291614912042,34.3989525837169,40.1737136543355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,14.3062578340753,0,8.51001973071586,15.6011155367049,0,0,0,0.857867961948885,1.08524321078289,0,0,1.42156779497018,0,0.301439377059586,0,0,0,0,0,0,0,0,0.868687840005475,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.35142424497814,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,1.40330047216537,0.896974044789907,0.511707249066704,2.57366273829772,1.48418066444991,0,0,0,0,0,0,0,0,1.14814448164607,0.546273504020151,4.45823010862042,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,2.3080511260475,3.60816110269676,0,5.46117361732928,0,0,0,0,4.82051789532479,0.676695028044854,0.154048617114644,0.307007349452259,0.551346289938122,0.107420244868274,0,0.170453254832202,1.15741646340759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762520775695299,0.511795582622668,1.28381696410176,0,0,0.539617372749944,0.823611089208164,0.824686816419805,0,0,0,0.975267478179181,0,0,0.682499557039929,1.1312434556297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0.349934720244983,0,0,0,3.76575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.996239941255349,1.65770349318689,0,0,0,0,0,0,0,1.1837208676432,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,1.23120413606075,6.38075512743207,0,0,0,0,6.86981950513967,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68069372556344,0.611030144933625,0,0,0,0.134802265961354,2.40773294189637,0,0,0,0,0,0,0,1.70603764996917,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.969890164884194,0,0.677942222341597,0,0,0,0,0,2.13452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,1.44475294950759,0,0.136905378891993,0,0,0,0,0.229160424011684,4.30723814746088,0,0.429226048136571,0.669514372325618,0.201550417460179,0.720599767084807,0,0.472699093843342,0.329663433524666,0.404421263125109,0.78741985211799,0,0,0.136203406111576,0.160753148465019,0.825236619583403,0.83088067605837,0,0,0,0,0.945668487590378,0.577000469484979,0,0,0,1.42939065274673,0,0,0,0,0,0,0,1.19271615249795,1.69968137280189,13.9224621994178,10.6005511129777,0,0.26446520348538,0,0,1.06787412567695,2.82967749179399,2.07119527673598,1.48849806543585,0,0,0,7.61624924717264,2.7575888342497,2.75711019087115,3.93447156851765,0,0,0.244052529803926,0,0.573409195690071,0.110929051536852,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0,0.701139929541673,0,0,0.251567901752575,0,0,0,0,0.147855149989634,1.43367090447332,3.59842489730884,5.89999236129786,0,2.39257543102195,2.08698024724694,12.7718967647636,0,2.84809513243263,5.27361111687422,1.18151612746737,21.3455529544107,6.36953421917786,0.400027764663154,0,0,0,0,0.643324774124777,0,0,0,0,0,0.617602894321944,0,0,0,3.88567613502067,9.99341922492992,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69732529954025,0,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0.319267718114302,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,1.12815492523886,0,3.12605604493237,0,0,0,0.0675375846183947,0,0.206686796501184,0,0.546974809018219,0,0,0.703484977438482,0,0.535701835878287,0,0,0.455324382702595,0,0,9.77481653793285,0.0679697329768317,0.0657727735628491,0,0,1.96232732126285,0.314231179832004,0,0,1.29556554731173,0,0.929195074296532,0,0,0.521574816907738,0.801711364730253,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0.735444965261716,0,0.196308467114945,1.48523200163543,0.8453114551668,0,0.469919589899268,0.580120991762195,0,0,0,0,1.46067277649303,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0.26721740526556,0,0,0.833565680400634,0,0,0,0.426467963801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| ||
|short_description=p3@RARRES2 | |short_description=p3@RARRES2 | ||
}} | }} |
Latest revision as of 02:52, 17 September 2015
Short description: | p3@RARRES2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RARRES2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 39bp_to_ENST00000466675_5end |
EntrezGene: | RARRES2 |
HGNC: | 9868 |
UniProt: | Q99969 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.97e-13 | 15 |
Ontology term | p-value | n |
---|---|---|
female gonad | 1.57e-14 | 13 |
right ovary | 2.57e-13 | 5 |
body cavity | 7.08e-12 | 46 |
body cavity or lining | 6.92e-11 | 49 |
gonad | 2.30e-10 | 21 |
indifferent external genitalia | 2.30e-10 | 21 |
indifferent gonad | 2.30e-10 | 21 |
gonad primordium | 2.30e-10 | 21 |
liver | 3.82e-10 | 19 |
digestive gland | 3.82e-10 | 19 |
liver bud | 3.82e-10 | 19 |
digestive tract diverticulum | 7.44e-10 | 23 |
external genitalia | 8.52e-10 | 22 |
body cavity precursor | 1.73e-09 | 54 |
epithelium of foregut-midgut junction | 6.33e-09 | 25 |
anatomical boundary | 6.33e-09 | 25 |
hepatobiliary system | 6.33e-09 | 25 |
foregut-midgut junction | 6.33e-09 | 25 |
septum transversum | 6.33e-09 | 25 |
hepatic diverticulum | 1.68e-08 | 22 |
liver primordium | 1.68e-08 | 22 |
sac | 1.83e-08 | 26 |
anatomical cavity | 6.22e-08 | 61 |
epithelial sac | 2.94e-07 | 25 |
reproductive structure | 6.65e-07 | 59 |
reproductive system | 6.65e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.37e-20 | 14 |
female reproductive organ cancer | 1.97e-09 | 27 |
reproductive organ cancer | 1.30e-08 | 29 |