FFCP PHASE1:Hg19::chr7:2695761..2695776,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80727 | |EntrezGene=80727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22222 | |HGNC=22222 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WYU9 | |UniProt=Q8WYU9 | ||
|association_with_transcript=-311bp_to_AF318350_5end | |association_with_transcript=-311bp_to_AF318350_5end | ||
|cluster_id=chr7:2695761..2695776,+ | |||
|coexpression_cluster_id=C716 | |||
|description=CAGE_peak_10_at_TTYH3_5end | |description=CAGE_peak_10_at_TTYH3_5end | ||
|id=chr7:2695761..2695776,+ | |id=chr7:2695761..2695776,+ | ||
|ontology_enrichment_celltype=CL:0000144!1.34e-20!625;CL:0002371!2.99e-18!591;CL:0000548!1.24e-15!679;CL:0000004!1.24e-15!679;CL:0000255!1.24e-15!679;CL:0002321!4.55e-15!248;CL:0000012!8.58e-15!682;CL:0000220!1.10e-14!246;CL:0000055!1.88e-12!180;CL:0000222!7.13e-12!119;CL:0000003!4.64e-11!722;CL:0000115!3.19e-09!35;CL:0000213!1.23e-08!57;CL:0000215!1.23e-08!57;CL:0002078!9.67e-08!44;CL:0000221!3.33e-07!71;CL:0002057!7.71e-07!42;CL:0002194!9.79e-07!63;CL:0000576!9.79e-07!63;CL:0000040!9.79e-07!63;CL:0000559!9.79e-07!63;CL:0000133!9.94e-07!59 | |ontology_enrichment_celltype=CL:0000144!1.34e-20!625;CL:0002371!2.99e-18!591;CL:0000548!1.24e-15!679;CL:0000004!1.24e-15!679;CL:0000255!1.24e-15!679;CL:0002321!4.55e-15!248;CL:0000012!8.58e-15!682;CL:0000220!1.10e-14!246;CL:0000055!1.88e-12!180;CL:0000222!7.13e-12!119;CL:0000003!4.64e-11!722;CL:0000115!3.19e-09!35;CL:0000213!1.23e-08!57;CL:0000215!1.23e-08!57;CL:0002078!9.67e-08!44;CL:0000221!3.33e-07!71;CL:0002057!7.71e-07!42;CL:0002194!9.79e-07!63;CL:0000576!9.79e-07!63;CL:0000040!9.79e-07!63;CL:0000559!9.79e-07!63;CL:0000133!9.94e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000473;6.42e-13;39!CL:0000234;6.42e-13;39!CL:0000115;4.38e-11;36!CL:0000860;2.58e-10;33!CL:0002057;2.58e-10;33!CL:0000071;1.12e-08;18!CL:0002139;5.87e-08;24!CL:1000413;3.12e-07;9!CL:1000746;4.02e-07;7!CL:1000612;4.02e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.52e-13,36;CL:0000473,3.80e-12,48;CL:0000234,3.80e-12,48;CL:0002078,4.40e-10,45;CL:0002194,3.25e-09,59;CL:0000576,3.25e-09,59;CL:0000040,3.25e-09,59;CL:0000559,3.25e-09,59;CL:0000071,3.27e-09,18;CL:0002546,3.27e-09,18;CL:0002321,7.51e-09,250;CL:0000213,1.10e-08,58;CL:0000215,1.10e-08,58;CL:0002009,1.11e-08,61;CL:0000860,2.19e-08,42;CL:0002057,2.19e-08,42;CL:0002139,3.23e-08,24;CL:0000222,1.17e-07,121;CL:0000839,1.69e-07,66;CL:1000746,2.46e-07,7;CL:1000612,2.46e-07,7;CL:0000557,2.75e-07,67;CL:1000413,3.24e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.12e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!8.95e-11!216;UBERON:0000468!2.73e-10!659;UBERON:0002049!3.11e-10!79;UBERON:0007798!3.11e-10!79;UBERON:0000467!1.24e-09!625;UBERON:0000480!2.03e-09!626;UBERON:0002204!2.73e-09!167;UBERON:0000922!9.73e-09!612;UBERON:0000923!1.87e-08!604;UBERON:0005291!1.87e-08!604;UBERON:0006598!1.87e-08!604;UBERON:0002532!1.87e-08!604;UBERON:0002050!2.95e-08!605;UBERON:0005423!2.95e-08!605;UBERON:0000055!6.72e-08!69;UBERON:0004535!8.76e-08!110;UBERON:0001981!1.16e-07!60;UBERON:0007500!1.16e-07!60;UBERON:0004537!1.16e-07!60;UBERON:0006965!1.16e-07!60;UBERON:0003914!2.29e-07!118;UBERON:0001009!4.91e-07!113;UBERON:0004872!6.49e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.12e-08;18!UBERON:0001986;1.12e-08;18!UBERON:0004852;1.12e-08;18!UBERON:0003915;3.12e-07;9!UBERON:0004700;3.12e-07;9!UBERON:0001917;3.12e-07;9!UBERON:0000074;4.02e-07;7!UBERON:0001229;4.02e-07;7 | |||
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|phase1_expression=0.54503513781167,1.49870366723688,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0.522371256399677,0,2.79120467188971,0.655324116390517,0.791300934685361,1.11389717664042,0,2.6893005858071,4.21886169616784,1.46062018077475,0.487932798790507,1.23121058076788,1.42800483870977,2.19418305034661,0.572471974262113,1.36874425072884,2.00868223351684,0.534893840235659,0.246301768349837,0.708397031823113,0,0.383829398097213,0.154816123316076,0.919421224478927,0.30120591877825,0.369754010166788,0.0774672005803016,0,0,0.553995408531877,0.200544447470142,0.651032612147555,0.895661896959697,0.647787332037959,0.257575567634187,2.03557534291391,1.13362783106643,1.21292030593908,1.16214518452842,2.87817521615278,1.54853185447552,2.8769239232215,1.2808035326455,0.709446689665756,1.72372840368309,1.29096936716765,1.35426486594342,0.941211697713023,3.0019676506363,1.34834090667051,1.83650335422542,0.320929027076094,1.27867425159808,0.989553900560148,1.19678194572979,1.70489900213078,2.90209238628584,0.56738522469114,1.86846674698672,1.7587406567972,0.521482918420201,0.65156653411535,0,0,0.632924774881769,1.05627643155971,0.425208599930087,0,0.336985893439485,0,0.16072558669708,0,0.39783335439818,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0.294605907474837,0,0.541607727530031,0,0.130059347559878,0.328875809207352,0.829050053357545,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,2.01210257911091,0.255725123687061,0,0.50133791063589,0.869079113764942,0,0,0.661743720148475,0.886917589850256,1.05401742831751,0.654895377488563,1.09288586487763,0.370784442784429,0.324547393654683,0.174129737299267,2.26028532882071,0,0.571994910780128,0.371457501329565,0.39752481473341,0,1.38856200643038,1.13061588384802,3.35599548967925,1.6507082516404,2.29894463190492,0.258416759169329,0.71153252537342,0.66944122552934,1.61131726843659,0.760272105718513,3.41686880567437,2.20597848207521,3.24056779152704,0.446498641420399,0,0.450445921933289,1.53316637465883,1.89853131913626,1.83201743930407,0,0,0,0.496971951695318,0.633152558322899,0.132409180813219,1.72101972449288,0.354668382198357,0,2.1349799145941,2.22000793575444,0.622422070799533,0.67355336034844,1.14423332179421,0.908144565869588,0.576175924479999,0.70296429550139,0,1.71141546463335,0.597794722207204,0.469737994575059,0.485618833104395,0.842704840213491,0,0.859840221182376,0.413303124703062,1.18800285728205,1.23633464639278,0,0.718618141816238,0.841680569770331,1.37630371859161,0,0.438977620880838,1.22595118319608,0,0.226864366320042,0.358779271377724,0.640672166455702,0.211931901159562,0.600182192168805,0.721367704669072,0.772921620136887,0.18611685633159,0.168776332241266,1.07180705677318,1.00973509697646,0.644349290496095,0.323292113637624,1.06502877754984,0.302256294682921,0.339121184620975,0.193260853163297,0.818238361772504,0,1.21973706129595,0.530119073285941,0.464775771478074,0.621966330092223,0.252320850875628,0,0,2.57296375277154,0,0.464367928031979,0,0.828147600278907,0.842923450390509,0.482022059766964,0.441175890929576,0,0.71181185733329,0.404493924480493,0,0,1.4763109092493,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0.245976877086227,0.857839051492628,0.878002283269004,2.24803506515239,0.402115889646523,0.555530670951178,0.977424915930974,0,0,1.04337364477569,0.234817388471643,1.01056513432752,0.925971025153221,1.33177906564219,0,0,1.23108503043699,0.468008530278475,2.37809859661965,0,0.839910640994298,0.567100388969546,0,0.290633938513962,0,0.985326475791887,0.352193736052904,0.207328115540772,0,0.50496973370552,6.66727890067775,8.02175693672383,16.4104426094066,3.4214489204541,2.46785982487976,0.600686115687835,5.43070221998099,0.897048674762886,0,0.7333828582095,0.258543431515556,0,0,1.06375246633948,2.08014873822732,0.514414748524284,0,1.3321108950805,0.428933980974443,1.62786481617433,0.823240336780769,0,1.06617584622764,0.791951872933429,0.301439377059586,0,0.399891964728228,4.86495122564762,7.03159928004977,6.32501818449095,0.718874566474748,0,0,0.289562613335158,0.821905290201534,0.537182889719687,0.112085143993527,0,0,0.128343036279748,1.77866236955724,1.30139853857622,1.54657762555539,0.502548796003046,1.91381625495949,0,0,0,0.736148950314839,3.00102312635806,0.813795071099207,1.87173775377726,2.3195768543631,1.41932173530541,0.468565659970853,0.300946099727719,0,1.03473071292505,2.65690239414175,0.368738337083406,1.04260337361699,0.783204629850962,2.74514739048685,0.206768026122887,0,0.320182673410333,0.606255142892519,0,0.907170879989041,0.496215615637554,0.306923946576125,0.841980283299221,0.768834895534206,0,0.160853921143607,1.48418066444991,0.925258162815933,0.710246901252508,0.574890092096664,1.03850885836724,1.62694529843943,0.120859449591622,1.20303882181971,0.184161977871793,0.459257792658427,1.0925470080403,0.524497659837696,0.902399225814824,0.770153371044148,0.784349769176855,1.46139224653261,1.16106791782163,0,1.36074964221213,1.51141141271498,10.7959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| ||
|short_description=p10@TTYH3 | |short_description=p10@TTYH3 | ||
}} | }} |
Latest revision as of 00:32, 18 September 2015
Short description: | p10@TTYH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TTYH3_5end |
Coexpression cluster: | C716_Melanocyte_Monocytederived_melanoma_Macrophage_Renal_CD14_Dendritic |
Association with transcript: | -311bp_to_AF318350_5end |
EntrezGene: | TTYH3 |
HGNC: | 22222 |
UniProt: | Q8WYU9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.52e-13 | 36 |
defensive cell | 3.80e-12 | 48 |
phagocyte | 3.80e-12 | 48 |
meso-epithelial cell | 4.40e-10 | 45 |
monopoietic cell | 3.25e-09 | 59 |
monocyte | 3.25e-09 | 59 |
monoblast | 3.25e-09 | 59 |
promonocyte | 3.25e-09 | 59 |
blood vessel endothelial cell | 3.27e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.27e-09 | 18 |
embryonic cell | 7.51e-09 | 250 |
lining cell | 1.10e-08 | 58 |
barrier cell | 1.10e-08 | 58 |
macrophage dendritic cell progenitor | 1.11e-08 | 61 |
classical monocyte | 2.19e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.19e-08 | 42 |
endothelial cell of vascular tree | 3.23e-08 | 24 |
mesodermal cell | 1.17e-07 | 121 |
myeloid lineage restricted progenitor cell | 1.69e-07 | 66 |
glomerular cell | 2.46e-07 | 7 |
kidney corpuscule cell | 2.46e-07 | 7 |
granulocyte monocyte progenitor cell | 2.75e-07 | 67 |
endothelial cell of artery | 3.24e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 9.26e-14 | 203 |
epithelial tube | 3.21e-09 | 117 |
blood vessel endothelium | 3.27e-09 | 18 |
endothelium | 3.27e-09 | 18 |
cardiovascular system endothelium | 3.27e-09 | 18 |
mesoderm | 5.99e-09 | 315 |
mesoderm-derived structure | 5.99e-09 | 315 |
presumptive mesoderm | 5.99e-09 | 315 |
epithelial tube open at both ends | 6.21e-08 | 59 |
blood vessel | 6.21e-08 | 59 |
blood vasculature | 6.21e-08 | 59 |
vascular cord | 6.21e-08 | 59 |
bone marrow | 1.88e-07 | 76 |
primitive nephron | 2.46e-07 | 7 |
renal glomerulus | 2.46e-07 | 7 |
renal corpuscle | 2.46e-07 | 7 |
glomerular capsule | 2.46e-07 | 7 |
metanephric mesenchyme | 2.46e-07 | 7 |
glomerular tuft | 2.46e-07 | 7 |
S-shaped body | 2.46e-07 | 7 |
renal vesicle | 2.46e-07 | 7 |
comma-shaped body | 2.46e-07 | 7 |
vasculature | 2.48e-07 | 78 |
vascular system | 2.48e-07 | 78 |
vessel | 2.91e-07 | 68 |
splanchnic layer of lateral plate mesoderm | 3.02e-07 | 83 |
endothelial tube | 3.24e-07 | 9 |
arterial system endothelium | 3.24e-07 | 9 |
endothelium of artery | 3.24e-07 | 9 |
musculoskeletal system | 5.30e-07 | 167 |
bone element | 5.37e-07 | 82 |
simple squamous epithelium | 5.91e-07 | 22 |
skeletal element | 6.32e-07 | 90 |