FFCP PHASE1:Hg19::chr8:10389502..10389527,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:10389502..10389527,- | |||
|coexpression_cluster_id=C507 | |||
|description=CAGE_peak_at_chr8:10389502..10389527,- | |description=CAGE_peak_at_chr8:10389502..10389527,- | ||
|id=chr8:10389502..10389527,- | |id=chr8:10389502..10389527,- | ||
|ontology_enrichment_celltype=CL:0000945!2.05e-26!24;CL:0000826!2.05e-26!24;CL:0000080!8.91e-21!6;CL:0000838!1.42e-15!52;CL:0000542!2.89e-15!53;CL:0000051!2.89e-15!53;CL:0000946!2.75e-14!1;CL:0000786!2.75e-14!1;CL:0000980!2.75e-14!1;CL:0000785!8.60e-08!2;CL:0000955!8.60e-08!2;CL:0000818!8.60e-08!2;CL:0000954!8.60e-08!2;CL:0000816!8.60e-08!2;CL:0000988!1.65e-07!182 | |ontology_enrichment_celltype=CL:0000945!2.05e-26!24;CL:0000826!2.05e-26!24;CL:0000080!8.91e-21!6;CL:0000838!1.42e-15!52;CL:0000542!2.89e-15!53;CL:0000051!2.89e-15!53;CL:0000946!2.75e-14!1;CL:0000786!2.75e-14!1;CL:0000980!2.75e-14!1;CL:0000785!8.60e-08!2;CL:0000955!8.60e-08!2;CL:0000818!8.60e-08!2;CL:0000954!8.60e-08!2;CL:0000816!8.60e-08!2;CL:0000988!1.65e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.19e-26;24!CL:0000542;4.68e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.19e-26,24;CL:0000826,1.19e-26,24;CL:0000838,1.32e-16,52;CL:0000542,2.75e-16,53;CL:0000051,2.75e-16,53;CL:0000988,1.83e-09,177;CL:0002087,2.99e-07,115;CL:0002031,6.20e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;4.68e-08;53 | |||
|ontology_enrichment_disease=DOID:630!1.07e-14!1;DOID:0050177!1.07e-14!1;DOID:0050427!1.07e-14!1;DOID:2355!1.84e-14!1;DOID:74!7.03e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:630;3.91e-19;1!DOID:0050177;3.91e-19;1!DOID:0050427;3.91e-19;1!DOID:2355;3.91e-19;1!DOID:74;2.99e-10;2!DOID:0060058;3.25e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.71e-19,1;DOID:0050177,2.71e-19,1;DOID:0050427,2.71e-19,1;DOID:2355,5.62e-19,1;DOID:74,3.58e-10,2;DOID:0060058,3.50e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001736!2.11e-14!1;UBERON:0006298!2.11e-14!1;UBERON:0001282!2.41e-14!1;UBERON:0009842!2.41e-14!1;UBERON:0003704!2.41e-14!1;UBERON:0001171!2.41e-14!1;UBERON:0001172!2.41e-14!1;UBERON:0002331!1.00e-12!10;UBERON:0000358!1.00e-12!10;UBERON:0000307!1.00e-12!10;UBERON:0000091!1.00e-12!10;UBERON:0000087!1.00e-12!10;UBERON:0007806!1.00e-12!10;UBERON:0008780!1.00e-12!10;UBERON:0005728!1.00e-12!10;UBERON:0000178!1.14e-08!15;UBERON:0000179!1.14e-08!15;UBERON:0000463!1.14e-08!15;UBERON:0001829!7.52e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;5.86e-17;10!UBERON:0000178;1.58e-11;15!UBERON:0000179;1.58e-11;15!UBERON:0000463;1.58e-11;15!UBERON:0002390;2.93e-09;32!UBERON:0002106;1.82e-07;3!UBERON:0000478;2.02e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,5.86e-17,10;UBERON:0000358,5.86e-17,10;UBERON:0000307,5.86e-17,10;UBERON:0000091,5.86e-17,10;UBERON:0000087,5.86e-17,10;UBERON:0007010,5.86e-17,10;UBERON:0007806,5.86e-17,10;UBERON:0008780,5.86e-17,10;UBERON:0005728,5.86e-17,10;UBERON:0000178,1.58e-11,15;UBERON:0000179,1.58e-11,15;UBERON:0000463,1.58e-11,15;UBERON:0002106,1.82e-07,3;UBERON:0004854,1.82e-07,3;UBERON:0009034,1.82e-07,3;UBERON:0002095,1.82e-07,3;UBERON:0004782,1.82e-07,3;UBERON:0003281,1.82e-07,3;UBERON:0009664,1.82e-07,3;UBERON:0002296,1.82e-07,3;UBERON:0005602,1.82e-07,3;UBERON:0001179,1.82e-07,3;UBERON:0006293,1.82e-07,3;UBERON:0000478,2.02e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75750833220288,1.39571002064908,1.33808328233255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.00051235496952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33738031625119,4.69542967996711,5.32551942477822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.88662062837944,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01607998478941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,12.9923502702408,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9234109538194 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75750833220288,1.39571002064908,1.33808328233255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.00051235496952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33738031625119,4.69542967996711,5.32551942477822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.88662062837944,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01607998478941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,12.9923502702408,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9234109538194 | ||
|short_description=p@chr8:10389502..10389527,- | |short_description=p@chr8:10389502..10389527,- | ||
}} | }} |
Latest revision as of 13:42, 31 July 2015
Short description: | p@chr8:10389502..10389527, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:10389502..10389527, - |
Coexpression cluster: | C507_splenic_hairy_b_cord_B_xeroderma_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.19e-26 | 24 |
pro-B cell | 1.19e-26 | 24 |
lymphoid lineage restricted progenitor cell | 1.32e-16 | 52 |
lymphocyte | 2.75e-16 | 53 |
common lymphoid progenitor | 2.75e-16 | 53 |
hematopoietic cell | 1.83e-09 | 177 |
nongranular leukocyte | 2.99e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 6.20e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 5.86e-17 | 10 |
blastocyst | 5.86e-17 | 10 |
blastula | 5.86e-17 | 10 |
bilaminar disc | 5.86e-17 | 10 |
inner cell mass | 5.86e-17 | 10 |
cleaving embryo | 5.86e-17 | 10 |
connecting stalk | 5.86e-17 | 10 |
inner cell mass derived epiblast | 5.86e-17 | 10 |
extraembryonic mesoderm | 5.86e-17 | 10 |
blood | 1.58e-11 | 15 |
haemolymphatic fluid | 1.58e-11 | 15 |
organism substance | 1.58e-11 | 15 |
spleen | 1.82e-07 | 3 |
gastrointestinal system mesentery | 1.82e-07 | 3 |
stomach region | 1.82e-07 | 3 |
mesentery | 1.82e-07 | 3 |
gastrointestinal system serosa | 1.82e-07 | 3 |
mesentery of stomach | 1.82e-07 | 3 |
gut mesentery | 1.82e-07 | 3 |
dorsal mesentery | 1.82e-07 | 3 |
dorsal mesogastrium | 1.82e-07 | 3 |
peritoneal cavity | 1.82e-07 | 3 |
spleen primordium | 1.82e-07 | 3 |
extraembryonic structure | 2.02e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.71e-19 | 1 |
monogenic disease | 2.71e-19 | 1 |
xeroderma pigmentosum | 2.71e-19 | 1 |
anemia | 5.62e-19 | 1 |
hematopoietic system disease | 3.58e-10 | 2 |
lymphoma | 3.50e-08 | 10 |