FFCP PHASE1:Hg19::chr14:22265481..22265487,+: Difference between revisions
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|id=chr14:22265481..22265487,+
|short_description=p5@TRAV8-1
|description=CAGE_peak_5_at_TRAV8-1_5end
|association_with_transcript=22bp_to_ENST00000390430,uc010air....") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12146 | |HGNC=12146 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=22bp_to_ENST00000390430,uc010air.1_5end | |||
|cluster_id=chr14:22265481..22265487,+ | |||
|coexpression_cluster_id=C1137 | |||
|description=CAGE_peak_5_at_TRAV8-1_5end | |||
|id=chr14:22265481..22265487,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.96e-38!18;CL:0000789!4.96e-38!18;CL:0002420!4.96e-38!18;CL:0002419!4.96e-38!18;CL:0000790!4.96e-38!18;CL:0000084!1.08e-26!25;CL:0000827!1.08e-26!25;CL:0000625!4.64e-22!11;CL:0000624!1.33e-20!6;CL:0000898!1.49e-15!3;CL:0000838!1.24e-13!52;CL:0000542!2.52e-13!53;CL:0000051!2.52e-13!53;CL:0000815!5.26e-11!2;CL:0000792!5.26e-11!2;CL:0002677!5.26e-11!2;CL:0000842!1.80e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.79e-16!15;UBERON:0000179!6.79e-16!15;UBERON:0000463!6.79e-16!15;UBERON:0002370!2.09e-12!4;UBERON:0005058!2.09e-12!4;UBERON:0009113!2.09e-12!4;UBERON:0003295!2.09e-12!4;UBERON:0005562!2.09e-12!4;UBERON:0003351!2.04e-08!6;UBERON:0000974!2.11e-08!10;UBERON:0001042!2.52e-08!10;UBERON:0009145!2.52e-08!10;UBERON:0006562!1.42e-07!11;UBERON:0004177!2.85e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.00e-40;2!UBERON:0005058;3.00e-40;2!UBERON:0009113;3.00e-40;2!UBERON:0004177;8.81e-17;5!UBERON:0005057;8.81e-17;5!UBERON:0002390;1.15e-12;32!UBERON:0000178;1.35e-12;15!UBERON:0000179;1.35e-12;15!UBERON:0000463;1.35e-12;15!UBERON:0002193;1.87e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.55e-21,4;UBERON:0005058,8.55e-21,4;UBERON:0009113,8.55e-21,4;UBERON:0003295,8.55e-21,4;UBERON:0005562,8.55e-21,4;UBERON:0003351,3.25e-14,6;UBERON:0000178,1.30e-12,15;UBERON:0000179,1.30e-12,15;UBERON:0000463,1.30e-12,15;UBERON:0004177,2.51e-12,7;UBERON:0005057,2.51e-12,7;UBERON:0000974,6.54e-09,10;UBERON:0003408,6.54e-09,10;UBERON:0001042,6.54e-09,10;UBERON:0009145,6.54e-09,10;UBERON:0006562,3.50e-08,11;UBERON:0009722,3.50e-08,11;UBERON:0007690,3.50e-08,11 | |||
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|short_description=p5@TRAV8-1 | |||
}} | }} |
Latest revision as of 03:35, 19 September 2015
Short description: | p5@TRAV8-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRAV8-1_5end |
Coexpression cluster: | C1137_CD4_CD8_thymus_Natural_blood_Whole_Peripheral |
Association with transcript: | 22bp_to_ENST00000390430, uc010air.1_5end |
EntrezGene: | NA |
HGNC: | 12146 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 8.55e-21 | 4 |
hemolymphoid system gland | 8.55e-21 | 4 |
thymic region | 8.55e-21 | 4 |
pharyngeal gland | 8.55e-21 | 4 |
thymus primordium | 8.55e-21 | 4 |
pharyngeal epithelium | 3.25e-14 | 6 |
blood | 1.30e-12 | 15 |
haemolymphatic fluid | 1.30e-12 | 15 |
organism substance | 1.30e-12 | 15 |
hemopoietic organ | 2.51e-12 | 7 |
immune organ | 2.51e-12 | 7 |
neck | 6.54e-09 | 10 |
gland of gut | 6.54e-09 | 10 |
chordate pharynx | 6.54e-09 | 10 |
pharyngeal region of foregut | 6.54e-09 | 10 |
pharynx | 3.50e-08 | 11 |
entire pharyngeal arch endoderm | 3.50e-08 | 11 |
early pharyngeal endoderm | 3.50e-08 | 11 |