FFCP PHASE1:Hg19::chr2:182761268..182761286,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:182761268..182761286,+ | |||
|description=CAGE_peak_at_chr2:182761268..182761286,+ | |description=CAGE_peak_at_chr2:182761268..182761286,+ | ||
|id=chr2:182761268..182761286,+ | |id=chr2:182761268..182761286,+ | ||
|ontology_enrichment_celltype=CL:0001014!2.52e-07!2;CL:0001016!2.52e-07!2 | |ontology_enrichment_celltype=CL:0001014!2.52e-07!2;CL:0001016!2.52e-07!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,7.29e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.23e-13;1 | |||
|ontology_enrichment_disease=DOID:4929!8.69e-08!2 | |ontology_enrichment_disease=DOID:4929!8.69e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:4929;2.15e-07;2!DOID:3493;2.74e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,2.15e-07,2;DOID:3493,2.74e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000160!1.75e-17!27;UBERON:0005409!1.89e-17!35;UBERON:0001007!1.57e-13!155;UBERON:0001555!1.57e-13!155;UBERON:0007026!1.57e-13!155;UBERON:0004119!1.13e-12!169;UBERON:0000925!1.13e-12!169;UBERON:0006595!1.13e-12!169;UBERON:0004921!6.22e-12!129;UBERON:0004185!6.22e-12!129;UBERON:0004907!7.58e-11!5;UBERON:0000059!1.82e-10!11;UBERON:0000077!1.85e-09!130;UBERON:0001052!6.49e-08!4;UBERON:0002108!1.22e-07!14;UBERON:0002294!1.99e-07!7;UBERON:0001173!1.99e-07!7;UBERON:0004912!1.99e-07!7;UBERON:0009497!8.87e-07!25;UBERON:0000015!8.87e-07!25;UBERON:0002423!8.87e-07!25;UBERON:0006235!8.87e-07!25;UBERON:0004161!8.87e-07!25 | |ontology_enrichment_uberon=UBERON:0000160!1.75e-17!27;UBERON:0005409!1.89e-17!35;UBERON:0001007!1.57e-13!155;UBERON:0001555!1.57e-13!155;UBERON:0007026!1.57e-13!155;UBERON:0004119!1.13e-12!169;UBERON:0000925!1.13e-12!169;UBERON:0006595!1.13e-12!169;UBERON:0004921!6.22e-12!129;UBERON:0004185!6.22e-12!129;UBERON:0004907!7.58e-11!5;UBERON:0000059!1.82e-10!11;UBERON:0000077!1.85e-09!130;UBERON:0001052!6.49e-08!4;UBERON:0002108!1.22e-07!14;UBERON:0002294!1.99e-07!7;UBERON:0001173!1.99e-07!7;UBERON:0004912!1.99e-07!7;UBERON:0009497!8.87e-07!25;UBERON:0000015!8.87e-07!25;UBERON:0002423!8.87e-07!25;UBERON:0006235!8.87e-07!25;UBERON:0004161!8.87e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;7.52e-41;17!UBERON:0005409;4.09e-40;22!UBERON:0004921;1.73e-22;33!UBERON:0002108;9.33e-22;4!UBERON:0000059;1.52e-17;11!UBERON:0001154;4.23e-13;1!UBERON:0001153;4.23e-13;1!UBERON:0009854;4.23e-13;1!UBERON:0001155;1.98e-12;9!UBERON:0004907;1.73e-10;5!UBERON:0001007;5.55e-10;81!UBERON:0001555;9.37e-09;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.93e-41,17;UBERON:0005409,2.59e-35,25;UBERON:0002108,1.04e-21,4;UBERON:0000059,1.43e-17,11;UBERON:0001154,3.76e-13,1;UBERON:0001153,3.76e-13,1;UBERON:0001045,3.76e-13,1;UBERON:0004921,1.52e-12,118;UBERON:0001155,1.91e-12,9;UBERON:0004907,1.61e-10,5;UBERON:0001007,6.39e-10,145;UBERON:0001555,6.39e-10,145;UBERON:0007026,6.39e-10,145;UBERON:0004119,7.69e-09,160;UBERON:0000925,7.69e-09,160;UBERON:0006595,7.69e-09,160;UBERON:0011216,6.48e-07,223 | |||
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| ||
|short_description=p@chr2:182761268..182761286,+ | |short_description=p@chr2:182761268..182761286,+ | ||
}} | }} |
Latest revision as of 04:01, 29 July 2015
Short description: | p@chr2:182761268..182761286, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:182761268..182761286, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 7.29e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.93e-41 | 17 |
gastrointestinal system | 2.59e-35 | 25 |
small intestine | 1.04e-21 | 4 |
large intestine | 1.43e-17 | 11 |
vermiform appendix | 3.76e-13 | 1 |
caecum | 3.76e-13 | 1 |
midgut | 3.76e-13 | 1 |
subdivision of digestive tract | 1.52e-12 | 118 |
colon | 1.91e-12 | 9 |
lower digestive tract | 1.61e-10 | 5 |
digestive system | 6.39e-10 | 145 |
digestive tract | 6.39e-10 | 145 |
primitive gut | 6.39e-10 | 145 |
endoderm-derived structure | 7.69e-09 | 160 |
endoderm | 7.69e-09 | 160 |
presumptive endoderm | 7.69e-09 | 160 |
organ system subdivision | 6.48e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 2.15e-07 | 2 |
signet ring cell adenocarcinoma | 2.74e-07 | 2 |