FFCP PHASE1:Hg19::chr2:234451186..234451205,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55230 | |EntrezGene=55230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20069 | |HGNC=20069 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=56bp_to_ENST00000485943_5end | |association_with_transcript=56bp_to_ENST00000485943_5end | ||
|cluster_id=chr2:234451186..234451205,- | |||
|coexpression_cluster_id=C655 | |||
|description=CAGE_peak_5_at_USP40_5end | |description=CAGE_peak_5_at_USP40_5end | ||
|id=chr2:234451186..234451205,- | |id=chr2:234451186..234451205,- | ||
|ontology_enrichment_celltype=CL:0000077!2.23e-16!19 | |ontology_enrichment_celltype=CL:0000077!2.23e-16!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;2.14e-49;19!CL:0000213;1.56e-07;58!CL:0000215;1.56e-07;58!CL:0000047;4.55e-07;2!CL:0002593;4.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.71e-49,19;CL:0000213,1.45e-15,58;CL:0000215,1.45e-15,58;CL:0000076,3.03e-14,63;CL:0000222,1.54e-08,121;CL:0002593,3.93e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.01e-18!14;DOID:120!4.50e-10!27;DOID:193!3.31e-09!29 | |ontology_enrichment_disease=DOID:2394!4.01e-18!14;DOID:120!4.50e-10!27;DOID:193!3.31e-09!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.01e-13;14!DOID:120;4.58e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.36e-13,14;DOID:120,4.97e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000992!8.28e-10!13;UBERON:0002118!2.52e-09!5;UBERON:0004532!2.52e-09!5;UBERON:0002119!4.72e-07!4;UBERON:0004531!4.72e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;1.96e-14;13!UBERON:0001282;3.54e-13;1!UBERON:0009842;3.54e-13;1!UBERON:0003704;3.54e-13;1!UBERON:0001171;3.54e-13;1!UBERON:0001172;3.54e-13;1!UBERON:0002119;1.75e-12;4!UBERON:0002118;3.58e-10;5!UBERON:0000991;4.97e-09;21!UBERON:0002456;4.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,2.34e-14,13;UBERON:0001282,3.76e-13,1;UBERON:0009842,3.76e-13,1;UBERON:0003704,3.76e-13,1;UBERON:0001171,3.76e-13,1;UBERON:0001172,3.76e-13,1;UBERON:0002119,2.35e-12,4;UBERON:0002118,3.59e-10,5;UBERON:0000991,5.53e-09,21;UBERON:0009196,5.53e-09,21;UBERON:0009117,5.53e-09,21;UBERON:0005564,5.53e-09,21;UBERON:0004176,1.39e-08,22;UBERON:0002456,3.93e-07,2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,1.58891016975863,0.860509862246441,0,0,0,0,0,0.538842688278752,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772921620136887,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,6.02878754119172,14.816068796205,1.89948683245908,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0.473107245101804,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.803701137152247,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0.421258456238981,0,1.70599442741899,0,0,0.565621727814851,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41826167541004,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.915360273587694,0,0.15543720058278,0.147855149989634,0.796483835818512,1.34940933649081,1.08684069813382,0,0,0.521745061811734,0.601030435988874,0.380805212168795,0,1.45478927362048,1.50374779859484,0.464033759878494,0.796191777397232,0,0,0,0,0,0.428883182749851,5.21988583930423,12.2421199776627,0,0,0,5.5584260488975,26.7526540486023,0.176689145945881,3.47245268887647,2.53413660979609,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@USP40 | |short_description=p5@USP40 | ||
}} | }} |
Latest revision as of 23:16, 15 September 2015
Short description: | p5@USP40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_USP40_5end |
Coexpression cluster: | C655_mesothelioma_Mesothelial_hepatoma_cholangiocellular_Urothelial_glioma_serous |
Association with transcript: | 56bp_to_ENST00000485943_5end |
EntrezGene: | USP40 |
HGNC: | 20069 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.71e-49 | 19 |
lining cell | 1.45e-15 | 58 |
barrier cell | 1.45e-15 | 58 |
squamous epithelial cell | 3.03e-14 | 63 |
mesodermal cell | 1.54e-08 | 121 |
smooth muscle cell of the internal thoracic artery | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
female gonad | 2.34e-14 | 13 |
intralobular bile duct | 3.76e-13 | 1 |
acinus | 3.76e-13 | 1 |
intrahepatic bile duct | 3.76e-13 | 1 |
portal lobule | 3.76e-13 | 1 |
hepatic acinus | 3.76e-13 | 1 |
left ovary | 2.35e-12 | 4 |
right ovary | 3.59e-10 | 5 |
gonad | 5.53e-09 | 21 |
indifferent external genitalia | 5.53e-09 | 21 |
indifferent gonad | 5.53e-09 | 21 |
gonad primordium | 5.53e-09 | 21 |
external genitalia | 1.39e-08 | 22 |
internal thoracic artery | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.36e-13 | 14 |
female reproductive organ cancer | 4.97e-07 | 27 |