FFCP PHASE1:Hg19::chr2:238671800..238671827,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:238671800..238671827,+ | |||
|coexpression_cluster_id=C829 | |||
|description=CAGE_peak_at_chr2:238671800..238671827,+ | |description=CAGE_peak_at_chr2:238671800..238671827,+ | ||
|id=chr2:238671800..238671827,+ | |id=chr2:238671800..238671827,+ | ||
|ontology_enrichment_celltype=CL:0002087!1.89e-24!119;CL:0002032!3.07e-24!165;CL:0000837!3.07e-24!165;CL:0000738!8.02e-24!140;CL:0000037!2.71e-23!172;CL:0000566!2.71e-23!172;CL:0002057!9.04e-23!42;CL:0002009!1.10e-22!65;CL:0002194!1.15e-22!63;CL:0000576!1.15e-22!63;CL:0000040!1.15e-22!63;CL:0000559!1.15e-22!63;CL:0000860!2.45e-22!45;CL:0000766!1.31e-21!76;CL:0000988!3.17e-21!182;CL:0002031!3.26e-21!124;CL:0000557!5.70e-21!71;CL:0000763!9.38e-21!112;CL:0000049!9.38e-21!112;CL:0000839!1.62e-19!70;CL:0000063!4.44e-14!578;CL:0000134!7.01e-09!358;CL:0000219!1.60e-07!390;CL:0002320!1.91e-07!365 | |ontology_enrichment_celltype=CL:0002087!1.89e-24!119;CL:0002032!3.07e-24!165;CL:0000837!3.07e-24!165;CL:0000738!8.02e-24!140;CL:0000037!2.71e-23!172;CL:0000566!2.71e-23!172;CL:0002057!9.04e-23!42;CL:0002009!1.10e-22!65;CL:0002194!1.15e-22!63;CL:0000576!1.15e-22!63;CL:0000040!1.15e-22!63;CL:0000559!1.15e-22!63;CL:0000860!2.45e-22!45;CL:0000766!1.31e-21!76;CL:0000988!3.17e-21!182;CL:0002031!3.26e-21!124;CL:0000557!5.70e-21!71;CL:0000763!9.38e-21!112;CL:0000049!9.38e-21!112;CL:0000839!1.62e-19!70;CL:0000063!4.44e-14!578;CL:0000134!7.01e-09!358;CL:0000219!1.60e-07!390;CL:0002320!1.91e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.94e-19;33!CL:0002057;1.94e-19;33!CL:0000473;2.09e-17;39!CL:0000234;2.09e-17;39!CL:0000576;3.17e-14;48!CL:0000766;3.86e-11;69!CL:0002087;8.27e-08;104!CL:0000763;2.29e-07;100!CL:0000738;3.39e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,9.38e-26,115;CL:0002032,3.37e-25,161;CL:0000837,3.37e-25,161;CL:0000738,5.26e-25,136;CL:0000473,8.89e-25,48;CL:0000234,8.89e-25,48;CL:0000037,2.26e-24,168;CL:0002194,2.85e-24,59;CL:0000576,2.85e-24,59;CL:0000040,2.85e-24,59;CL:0000559,2.85e-24,59;CL:0002009,2.96e-24,61;CL:0000860,2.39e-23,42;CL:0002057,2.39e-23,42;CL:0000988,7.15e-23,177;CL:0000766,1.28e-22,72;CL:0002031,3.00e-22,120;CL:0000557,5.13e-22,67;CL:0000763,1.42e-21,108;CL:0000049,1.42e-21,108;CL:0000839,1.11e-20,66;CL:0000134,1.29e-09,354;CL:0000219,2.26e-08,386;CL:0002320,4.27e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.56e-17;42!CL:0000049;1.50e-07;108 | |||
|ontology_enrichment_disease=DOID:162!9.04e-17!235;DOID:14566!3.56e-16!239;DOID:0050686!2.39e-08!137;DOID:0050687!3.99e-07!143;DOID:305!5.97e-07!106 | |ontology_enrichment_disease=DOID:162!9.04e-17!235;DOID:14566!3.56e-16!239;DOID:0050686!2.39e-08!137;DOID:0050687!3.99e-07!143;DOID:305!5.97e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.43e-16,235;DOID:14566,4.08e-15,239;DOID:0050686,7.60e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.29e-17!102;UBERON:0003061!1.29e-17!102;UBERON:0002371!4.73e-16!80;UBERON:0001474!3.26e-14!86;UBERON:0002193!1.11e-13!112;UBERON:0004765!5.90e-11!101;UBERON:0001434!5.90e-11!101;UBERON:0002405!1.52e-09!115;UBERON:0002384!3.44e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!1.29e-17!102;UBERON:0003061!1.29e-17!102;UBERON:0002371!4.73e-16!80;UBERON:0001474!3.26e-14!86;UBERON:0002193!1.11e-13!112;UBERON:0004765!5.90e-11!101;UBERON:0001434!5.90e-11!101;UBERON:0002405!1.52e-09!115;UBERON:0002384!3.44e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.00e-18,98;UBERON:0003061,2.00e-18,98;UBERON:0002371,4.64e-17,76;UBERON:0001474,6.16e-15,82;UBERON:0002193,5.16e-14,108;UBERON:0004765,3.44e-12,90;UBERON:0002405,1.23e-11,93;UBERON:0001434,3.97e-10,100;UBERON:0002384,6.36e-08,371 | |||
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| ||
|short_description=p@chr2:238671800..238671827,+ | |short_description=p@chr2:238671800..238671827,+ | ||
}} | }} |
Latest revision as of 08:16, 29 July 2015
Short description: | p@chr2:238671800..238671827, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238671800..238671827, + |
Coexpression cluster: | C829_Neutrophils_CD14_Monocytederived_Prostate_acute_CD4_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 9.38e-26 | 115 |
hematopoietic oligopotent progenitor cell | 3.37e-25 | 161 |
hematopoietic multipotent progenitor cell | 3.37e-25 | 161 |
leukocyte | 5.26e-25 | 136 |
defensive cell | 8.89e-25 | 48 |
phagocyte | 8.89e-25 | 48 |
hematopoietic stem cell | 2.26e-24 | 168 |
monopoietic cell | 2.85e-24 | 59 |
monocyte | 2.85e-24 | 59 |
monoblast | 2.85e-24 | 59 |
promonocyte | 2.85e-24 | 59 |
macrophage dendritic cell progenitor | 2.96e-24 | 61 |
classical monocyte | 2.39e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.39e-23 | 42 |
hematopoietic cell | 7.15e-23 | 177 |
myeloid leukocyte | 1.28e-22 | 72 |
hematopoietic lineage restricted progenitor cell | 3.00e-22 | 120 |
granulocyte monocyte progenitor cell | 5.13e-22 | 67 |
myeloid cell | 1.42e-21 | 108 |
common myeloid progenitor | 1.42e-21 | 108 |
myeloid lineage restricted progenitor cell | 1.11e-20 | 66 |
mesenchymal cell | 1.29e-09 | 354 |
motile cell | 2.26e-08 | 386 |
connective tissue cell | 4.27e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.00e-18 | 98 |
blood island | 2.00e-18 | 98 |
bone marrow | 4.64e-17 | 76 |
bone element | 6.16e-15 | 82 |
hemolymphoid system | 5.16e-14 | 108 |
skeletal element | 3.44e-12 | 90 |
immune system | 1.23e-11 | 93 |
skeletal system | 3.97e-10 | 100 |
connective tissue | 6.36e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.43e-16 | 235 |
disease of cellular proliferation | 4.08e-15 | 239 |
organ system cancer | 7.60e-08 | 137 |