FFCP PHASE1:Hg19::chr2:45419799..45419807,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-375bp_to_ENST00000454673,uc002rur.1_5end | |association_with_transcript=-375bp_to_ENST00000454673,uc002rur.1_5end | ||
|cluster_id=chr2:45419799..45419807,- | |||
|coexpression_cluster_id=C913 | |||
|description=CAGE_peak_1_at_ENST00000454673_5end,CAGE_peak_1_at_uc002rur.1_5end | |description=CAGE_peak_1_at_ENST00000454673_5end,CAGE_peak_1_at_uc002rur.1_5end | ||
|id=chr2:45419799..45419807,- | |id=chr2:45419799..45419807,- | ||
|ontology_enrichment_celltype=CL:0000188!1.18e-13!9;CL:0000569!3.08e-08!4;CL:0000011!3.08e-08!4;CL:0000136!5.28e-07!15;CL:0000680!5.56e-07!57;CL:0000056!5.56e-07!57;CL:0000355!5.56e-07!57 | |ontology_enrichment_celltype=CL:0000188!1.18e-13!9;CL:0000569!3.08e-08!4;CL:0000011!3.08e-08!4;CL:0000136!5.28e-07!15;CL:0000680!5.56e-07!57;CL:0000056!5.56e-07!57;CL:0000355!5.56e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000515;2.74e-34;3!CL:0000056;6.64e-26;4!CL:0000680;1.02e-25;7!CL:0000188;5.78e-20;9!CL:0000569;6.20e-12;4!CL:0002321;2.54e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,6.11e-26,4;CL:0000188,6.71e-20,9;CL:0000569,5.40e-12,4;CL:0000011,5.40e-12,4;CL:0000680,8.95e-09,58;CL:0000056,8.95e-09,58;CL:0000355,8.95e-09,58;CL:0002494,9.58e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000515;6.64e-26;4!UBERON:0010115;1.05e-12;1!CL:0000011;6.20e-12;4!CL:0000355;6.48e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!3.98e-08!61;UBERON:0002036!3.98e-08!61;UBERON:0003082!3.98e-08!61;UBERON:0002385!1.05e-07!63;UBERON:0001015!1.05e-07!63;UBERON:0000383!1.05e-07!63;UBERON:0004290!3.36e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.26e-43;16!UBERON:0002036;1.26e-43;16!UBERON:0002385;2.50e-21;31!UBERON:0001015;2.50e-21;31!UBERON:0000383;2.50e-21;31!UBERON:0002363;1.05e-12;1!UBERON:0002135;3.26e-12;1!UBERON:0000948;3.53e-08;22!UBERON:0007100;3.22e-07;25!UBERON:0002360;5.57e-07;2!UBERON:0000094;5.57e-07;2!UBERON:0010743;5.57e-07;2!UBERON:0002133;9.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,1.11e-12,1;UBERON:0007645,1.11e-12,1;UBERON:0007647,1.11e-12,1;UBERON:0010115,1.11e-12,1;UBERON:0002135,3.08e-12,1;UBERON:0001134,1.23e-10,62;UBERON:0002036,1.23e-10,62;UBERON:0003082,1.23e-10,62;UBERON:0002385,2.82e-10,64;UBERON:0001015,2.82e-10,64;UBERON:0000383,2.82e-10,64;UBERON:0002329,3.57e-09,71;UBERON:0003059,3.57e-09,71;UBERON:0007282,3.57e-09,71;UBERON:0004290,3.57e-09,71;UBERON:0009618,3.57e-09,71;UBERON:0003077,4.93e-09,72;UBERON:0007285,4.93e-09,72;UBERON:0007524,6.75e-09,73;UBERON:0007503,2.88e-08,78;UBERON:0000486,1.03e-07,83;UBERON:0000948,1.51e-07,24;UBERON:0005498,1.51e-07,24;UBERON:0004140,1.51e-07,24;UBERON:0009881,1.51e-07,24;UBERON:0004141,1.51e-07,24;UBERON:0003084,1.51e-07,24;UBERON:0007005,1.51e-07,24;UBERON:0004139,1.51e-07,24;UBERON:0004291,1.51e-07,24;UBERON:0002360,5.73e-07,2;UBERON:0000094,5.73e-07,2;UBERON:0010743,5.73e-07,2;UBERON:0002133,9.54e-07,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,1.55605517699883,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0.408308342509787,0.122834317311768,0.309977343527296,0,0,0,0,0,0.375355559615893,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.299918973546171,0,0,0,0,0,0,8.97644101338991,3.28762116080613,5.72995082367666,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0.459257792658427,0.182091168006717,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,5.60690166094307,0.462145851343933,0.307007349452259,1.24052915236078,0.214840489736547,0.145016693914229,1.10794615640931,8.01288320820636,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0,0.66343897524122,0,0.578775534266688,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,6.25547138322031,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,1.39641200636127,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04478362020812,0.233713309847224,0,0.378806010550178,0.251567901752575,0.889811221596536,1.83072054717539,2.87338755150154,0.15543720058278,0.147855149989634,0,0,0,4.97647449409027,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,14.4009995278735,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0.982886743728125,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.307988420568741,6.95888658802919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,1.84870251452567,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0.714193294391221,0,0,0,0,0.202117188958219,0,0.342233301085281,0,0.215166616178029,0.99798106963804,0,0,0,0,0,0,0.406896178315738,0,0.603821380773079,0 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|phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,1.55605517699883,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0.408308342509787,0.122834317311768,0.309977343527296,0,0,0,0,0,0.375355559615893,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.299918973546171,0,0,0,0,0,0,8.97644101338991,3.28762116080613,5.72995082367666,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0.459257792658427,0.182091168006717,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,5.60690166094307,0.462145851343933,0.307007349452259,1.24052915236078,0.214840489736547,0.145016693914229,1.10794615640931,8.01288320820636,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0,0.66343897524122,0,0.578775534266688,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,6.25547138322031,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,1.39641200636127,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04478362020812,0.233713309847224,0,0.378806010550178,0.251567901752575,0.889811221596536,1.83072054717539,2.87338755150154,0.15543720058278,0.147855149989634,0,0,0,4.97647449409027,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,14.4009995278735,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0.982886743728125,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.307988420568741,6.95888658802919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,1.84870251452567,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0.714193294391221,0,0,0,0,0.202117188958219,0,0.342233301085281,0,0.215166616178029,0.99798106963804,0,0,0,0,0,0,0.406896178315738,0,0.603821380773079,0 | ||
|short_description=p1@ENST00000454673,p1@uc002rur.1 | |short_description=p1@ENST00000454673,p1@uc002rur.1 | ||
}} | }} |
Latest revision as of 10:26, 29 July 2015
Short description: | p1@ENST00000454673, p1@uc002rur.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000454673_5end, CAGE_peak_1_at_uc002rur.1_5end |
Coexpression cluster: | C913_mesenchymal_Skeletal_Myoblast_extraskeletal_skeletal_rhabdomyosarcoma_small |
Association with transcript: | -375bp_to_ENST00000454673, uc002rur.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 6.11e-26 | 4 |
cell of skeletal muscle | 6.71e-20 | 9 |
cardiac mesenchymal cell | 5.40e-12 | 4 |
migratory trunk neural crest cell | 5.40e-12 | 4 |
muscle precursor cell | 8.95e-09 | 58 |
myoblast | 8.95e-09 | 58 |
multi-potent skeletal muscle stem cell | 8.95e-09 | 58 |
cardiocyte | 9.58e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
dura mater | 1.11e-12 | 1 |
future meninx | 1.11e-12 | 1 |
ectomeninx | 1.11e-12 | 1 |
future dura mater | 1.11e-12 | 1 |
mitral valve | 3.08e-12 | 1 |
skeletal muscle tissue | 1.23e-10 | 62 |
striated muscle tissue | 1.23e-10 | 62 |
myotome | 1.23e-10 | 62 |
muscle tissue | 2.82e-10 | 64 |
musculature | 2.82e-10 | 64 |
musculature of body | 2.82e-10 | 64 |
somite | 3.57e-09 | 71 |
presomitic mesoderm | 3.57e-09 | 71 |
presumptive segmental plate | 3.57e-09 | 71 |
dermomyotome | 3.57e-09 | 71 |
trunk paraxial mesoderm | 3.57e-09 | 71 |
paraxial mesoderm | 4.93e-09 | 72 |
presumptive paraxial mesoderm | 4.93e-09 | 72 |
dense mesenchyme tissue | 6.75e-09 | 73 |
epithelial vesicle | 2.88e-08 | 78 |
multilaminar epithelium | 1.03e-07 | 83 |
heart | 1.51e-07 | 24 |
primitive heart tube | 1.51e-07 | 24 |
primary heart field | 1.51e-07 | 24 |
anterior lateral plate mesoderm | 1.51e-07 | 24 |
heart tube | 1.51e-07 | 24 |
heart primordium | 1.51e-07 | 24 |
cardiac mesoderm | 1.51e-07 | 24 |
cardiogenic plate | 1.51e-07 | 24 |
heart rudiment | 1.51e-07 | 24 |
meninx | 5.73e-07 | 2 |
membrane organ | 5.73e-07 | 2 |
meningeal cluster | 5.73e-07 | 2 |
atrioventricular valve | 9.54e-07 | 2 |