FFCP PHASE1:Hg19::chr2:47055020..47055039,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100134259 | |EntrezGene=100134259 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENST00000490950,NR_024452,uc002rvi.3_5end | |association_with_transcript=17bp_to_ENST00000490950,NR_024452,uc002rvi.3_5end | ||
|cluster_id=chr2:47055020..47055039,+ | |||
|coexpression_cluster_id=C4233 | |||
|description=CAGE_peak_3_at_LOC100134259_5end | |description=CAGE_peak_3_at_LOC100134259_5end | ||
|id=chr2:47055020..47055039,+ | |id=chr2:47055020..47055039,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.10e-28!180;CL:0002620!2.14e-25!23;CL:0000057!5.08e-25!75;CL:0000048!1.27e-18!430;CL:0000723!4.69e-18!436;CL:0000034!2.53e-17!444;CL:0002334!6.19e-13!12;CL:0002570!1.28e-12!8;CL:0000134!1.97e-10!358;CL:0002320!2.02e-10!365;CL:0000188!4.18e-10!9;CL:0000680!8.46e-10!57;CL:0000056!8.46e-10!57;CL:0000355!8.46e-10!57;CL:0002371!2.15e-09!591;CL:0000219!4.57e-09!390;CL:0002540!1.86e-08!6;CL:0000515!2.47e-08!4;CL:0000144!3.92e-08!625;CL:0000187!1.93e-07!54;CL:0002582!1.94e-07!3;CL:0002092!5.84e-07!10 | |ontology_enrichment_celltype=CL:0000055!2.10e-28!180;CL:0002620!2.14e-25!23;CL:0000057!5.08e-25!75;CL:0000048!1.27e-18!430;CL:0000723!4.69e-18!436;CL:0000034!2.53e-17!444;CL:0002334!6.19e-13!12;CL:0002570!1.28e-12!8;CL:0000134!1.97e-10!358;CL:0002320!2.02e-10!365;CL:0000188!4.18e-10!9;CL:0000680!8.46e-10!57;CL:0000056!8.46e-10!57;CL:0000355!8.46e-10!57;CL:0002371!2.15e-09!591;CL:0000219!4.57e-09!390;CL:0002540!1.86e-08!6;CL:0000515!2.47e-08!4;CL:0000144!3.92e-08!625;CL:0000187!1.93e-07!54;CL:0002582!1.94e-07!3;CL:0002092!5.84e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.38e-23;23!CL:0002570;2.95e-13;8!CL:0002583;2.61e-10;2!CL:0002334;3.63e-09;12!CL:0000723;1.13e-07;61!CL:0000057;4.07e-07;73!CL:0002582;4.39e-07;3!CL:0002092;5.80e-07;10!CL:0002540;6.65e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.23e-23,23;CL:0000057,8.13e-14,76;CL:0002570,2.22e-13,8;CL:0002583,2.62e-10,2;CL:0000048,2.83e-10,427;CL:0000723,5.27e-10,433;CL:0000034,1.18e-09,441;CL:0002334,3.52e-09,12;CL:0000134,1.68e-07,354;CL:0002320,3.32e-07,361;CL:0002582,4.46e-07,3;CL:0002092,5.81e-07,10;CL:0002540,6.46e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!9.27e-11!5;DOID:450!9.27e-11!5;DOID:66!9.27e-11!5;DOID:423!9.27e-11!5;DOID:0080000!9.27e-11!5;DOID:11722!9.27e-11!5 | |||
|ontology_enrichment_disease_v019=DOID:17;3.71e-08;5!DOID:450;3.71e-08;5!DOID:66;3.71e-08;5!DOID:423;3.71e-08;5!DOID:0080000;3.71e-08;5!DOID:11722;3.71e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.45e-08,5;DOID:450,3.45e-08,5;DOID:66,3.45e-08,5;DOID:423,3.45e-08,5;DOID:0080000,3.45e-08,5;DOID:11722,3.45e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.04e-20!45;UBERON:0002416!1.04e-20!45;UBERON:0002097!1.88e-17!40;UBERON:0000914!5.09e-14!83;UBERON:0002329!5.09e-14!83;UBERON:0003077!5.09e-14!83;UBERON:0003059!5.09e-14!83;UBERON:0007282!5.09e-14!83;UBERON:0009618!5.09e-14!83;UBERON:0007285!5.09e-14!83;UBERON:0004290!4.13e-13!70;UBERON:0002384!4.07e-12!375;UBERON:0000486!3.98e-11!82;UBERON:0003102!1.97e-09!95;UBERON:0001134!8.23e-09!61;UBERON:0002036!8.23e-09!61;UBERON:0003082!8.23e-09!61;UBERON:0001013!8.59e-09!14;UBERON:0002385!2.29e-08!63;UBERON:0001015!2.29e-08!63;UBERON:0000383!2.29e-08!63;UBERON:0002067!2.91e-07!9;UBERON:0004016!2.91e-07!9;UBERON:0010083!2.91e-07!9 | |ontology_enrichment_uberon=UBERON:0002199!1.04e-20!45;UBERON:0002416!1.04e-20!45;UBERON:0002097!1.88e-17!40;UBERON:0000914!5.09e-14!83;UBERON:0002329!5.09e-14!83;UBERON:0003077!5.09e-14!83;UBERON:0003059!5.09e-14!83;UBERON:0007282!5.09e-14!83;UBERON:0009618!5.09e-14!83;UBERON:0007285!5.09e-14!83;UBERON:0004290!4.13e-13!70;UBERON:0002384!4.07e-12!375;UBERON:0000486!3.98e-11!82;UBERON:0003102!1.97e-09!95;UBERON:0001134!8.23e-09!61;UBERON:0002036!8.23e-09!61;UBERON:0003082!8.23e-09!61;UBERON:0001013!8.59e-09!14;UBERON:0002385!2.29e-08!63;UBERON:0001015!2.29e-08!63;UBERON:0000383!2.29e-08!63;UBERON:0002067!2.91e-07!9;UBERON:0004016!2.91e-07!9;UBERON:0010083!2.91e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002199;4.91e-12;46!UBERON:0002416;4.91e-12;46!UBERON:0002097;6.75e-12;41!UBERON:0001013;1.43e-10;14!UBERON:0003102;1.79e-09;50!UBERON:0002072;7.60e-09;5!UBERON:0002371;8.56e-09;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,8.26e-20,46;UBERON:0002416,8.26e-20,46;UBERON:0002097,2.70e-14,41;UBERON:0001013,1.18e-10,14;UBERON:0002384,6.58e-09,371;UBERON:0002072,7.51e-09,5;UBERON:0003102,2.68e-07,99 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,4.42203911398782,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0.352303495931295,1.45685649931318,0.421352420106746,0,0,0,0,0.247266929278557,0,0,0,0,0,0.877955241761676,0.919463387397059,0.150238058906597,0,0.717558542755448,0.85422955527427,6.99375273826554,1.50045548042201,1.75189299705346,1.03056216018252,1.8611685633159,3.88185564154912,2.14361411354637,3.02920529092937,1.84099797284599,0,1.77504796258307,0.906768884048762,2.03472710772585,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22651376278,0,0,0.257207374262142,0,0.266422179016099,0,0,0,1.62868092146868,0,0,0,0,0,0,0,0,0,0,4.27910715122155,0.289562613335158,0.410952645100767,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0.300946099727719,0,0,0.664225598535437,1.29058417979192,0.347534457872331,0,0,0,0,0,0,0,0,0,1.68808170616869,0.280660094433074,0.256278298511402,0,0.804269605718038,0,6.9394362211195,8.87808626565635,7.2271897292152,0.519254429183621,5.34567740915813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462145851343933,0.460511024178389,1.7918754422989,0.107420244868274,1.59518363305651,0.596586391912706,0,0,0,0,0,1.39453664789186,0.62962469366128,2.7881490806424,0,0.532306030317022,3.47973196830029,0,0,0,0,0,0,0,4.77304871888905,0,0,0,0,0.202182481573316,1.58510321173008,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,5.55684950723184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19271615249795,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.41795652413558,1.8697064787778,2.77402930751307,3.97746311077687,1.50940741051545,2.66943366478961,0,1.36107831386915,1.70980920641059,0.295710299979268,0,0,0.310525913752519,2.90294345488599,10.3678268677618,0,0.300515217994437,0,0,2.36403256963327,0,3.24823631914946,0.796191777397232,0,0.686791410365586,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.288292572803,0,0,0,1.81534561833168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0586880643807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0.214100523890983,0,0,0,0,0,4.42203911398782,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0.352303495931295,1.45685649931318,0.421352420106746,0,0,0,0,0.247266929278557,0,0,0,0,0,0.877955241761676,0.919463387397059,0.150238058906597,0,0.717558542755448,0.85422955527427,6.99375273826554,1.50045548042201,1.75189299705346,1.03056216018252,1.8611685633159,3.88185564154912,2.14361411354637,3.02920529092937,1.84099797284599,0,1.77504796258307,0.906768884048762,2.03472710772585,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22651376278,0,0,0.257207374262142,0,0.266422179016099,0,0,0,1.62868092146868,0,0,0,0,0,0,0,0,0,0,4.27910715122155,0.289562613335158,0.410952645100767,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0.300946099727719,0,0,0.664225598535437,1.29058417979192,0.347534457872331,0,0,0,0,0,0,0,0,0,1.68808170616869,0.280660094433074,0.256278298511402,0,0.804269605718038,0,6.9394362211195,8.87808626565635,7.2271897292152,0.519254429183621,5.34567740915813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462145851343933,0.460511024178389,1.7918754422989,0.107420244868274,1.59518363305651,0.596586391912706,0,0,0,0,0,1.39453664789186,0.62962469366128,2.7881490806424,0,0.532306030317022,3.47973196830029,0,0,0,0,0,0,0,4.77304871888905,0,0,0,0,0.202182481573316,1.58510321173008,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,5.55684950723184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19271615249795,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.41795652413558,1.8697064787778,2.77402930751307,3.97746311077687,1.50940741051545,2.66943366478961,0,1.36107831386915,1.70980920641059,0.295710299979268,0,0,0.310525913752519,2.90294345488599,10.3678268677618,0,0.300515217994437,0,0,2.36403256963327,0,3.24823631914946,0.796191777397232,0,0.686791410365586,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.288292572803,0,0,0,1.81534561833168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0586880643807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@LOC100134259 | |short_description=p3@LOC100134259 | ||
}} | }} |
Latest revision as of 11:17, 17 September 2015
Short description: | p3@LOC100134259 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC100134259_5end |
Coexpression cluster: | C4233_Preadipocyte_mesenchymal_Fibroblast_Smooth_bone_Hair_Mesenchymal |
Association with transcript: | 17bp_to_ENST00000490950, NR_024452, uc002rvi.3_5end |
EntrezGene: | LOC100134259 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.23e-23 | 23 |
fibroblast | 8.13e-14 | 76 |
mesenchymal stem cell of adipose | 2.22e-13 | 8 |
subcutaneous preadipocyte | 2.62e-10 | 2 |
multi fate stem cell | 2.83e-10 | 427 |
somatic stem cell | 5.27e-10 | 433 |
stem cell | 1.18e-09 | 441 |
preadipocyte | 3.52e-09 | 12 |
mesenchymal cell | 1.68e-07 | 354 |
connective tissue cell | 3.32e-07 | 361 |
visceral preadipocyte | 4.46e-07 | 3 |
bone marrow cell | 5.81e-07 | 10 |
mesenchymal stem cell of the bone marrow | 6.46e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
integument | 8.26e-20 | 46 |
integumental system | 8.26e-20 | 46 |
skin of body | 2.70e-14 | 41 |
adipose tissue | 1.18e-10 | 14 |
connective tissue | 6.58e-09 | 371 |
hypodermis | 7.51e-09 | 5 |
surface structure | 2.68e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.45e-08 | 5 |
myotonic disease | 3.45e-08 | 5 |
muscle tissue disease | 3.45e-08 | 5 |
myopathy | 3.45e-08 | 5 |
muscular disease | 3.45e-08 | 5 |
myotonic dystrophy | 3.45e-08 | 5 |