FFCP PHASE1:Hg19::chr9:6645628..6645659,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2731 | |EntrezGene=2731 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4313 | |HGNC=4313 | ||
|TSSclassifier=strong | |||
|UniProt=P23378 | |UniProt=P23378 | ||
|association_with_transcript=0bp_to_ENST00000321612_5end | |association_with_transcript=0bp_to_ENST00000321612_5end | ||
|cluster_id=chr9:6645628..6645659,- | |||
|description=CAGE_peak_3_at_GLDC_5end | |description=CAGE_peak_3_at_GLDC_5end | ||
|id=chr9:6645628..6645659,- | |id=chr9:6645628..6645659,- | ||
|ontology_enrichment_celltype=CL:1000507!7.71e-10!12;CL:1000494!7.71e-10!12;CL:0002319!3.55e-08!25;CL:0002322!6.81e-08!5;CL:0000181!4.22e-07!12;CL:0000417!4.22e-07!12;CL:0000668!4.22e-07!12;CL:0000414!4.22e-07!12;CL:0000412!4.22e-07!12;CL:0000182!4.22e-07!12;CL:1000497!5.74e-07!18;CL:0002518!5.74e-07!18 | |ontology_enrichment_celltype=CL:1000507!7.71e-10!12;CL:1000494!7.71e-10!12;CL:0002319!3.55e-08!25;CL:0002322!6.81e-08!5;CL:0000181!4.22e-07!12;CL:0000417!4.22e-07!12;CL:0000668!4.22e-07!12;CL:0000414!4.22e-07!12;CL:0000412!4.22e-07!12;CL:0000182!4.22e-07!12;CL:1000497!5.74e-07!18;CL:0002518!5.74e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.46e-19;5!CL:1000507;2.94e-17;10!CL:1000494;2.94e-17;10!CL:0000182;1.55e-15;12!CL:0002321;1.51e-11;15!CL:1000449;3.49e-11;15!CL:1000497;9.39e-10;17!CL:0002518;9.39e-10;17!CL:0002253;1.21e-08;2!CL:0002681;1.52e-07;12!CL:0002584;1.52e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.40e-19,5;CL:1000507,1.93e-17,10;CL:1000494,1.93e-17,10;CL:0000182,1.30e-15,12;CL:1000449,2.66e-11,15;CL:1000497,7.42e-10,17;CL:0002518,7.42e-10,17;CL:0002253,7.40e-09,2;CL:0000047,4.07e-08,8;CL:0002681,1.42e-07,12;CL:0002584,1.42e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.04e-12;11!UBERON:0003104;7.33e-11;31!UBERON:0009497;1.21e-10;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.44e-32!94;UBERON:0001016!1.44e-32!94;UBERON:0005743!1.14e-29!86;UBERON:0001017!1.28e-27!82;UBERON:0001049!4.19e-20!57;UBERON:0005068!4.19e-20!57;UBERON:0006241!4.19e-20!57;UBERON:0007135!4.19e-20!57;UBERON:0003075!1.22e-19!86;UBERON:0007284!1.22e-19!86;UBERON:0000955!1.39e-19!69;UBERON:0006238!1.39e-19!69;UBERON:0002346!4.22e-18!90;UBERON:0003056!1.39e-17!61;UBERON:0004121!1.30e-16!169;UBERON:0002780!1.66e-16!41;UBERON:0001890!1.66e-16!41;UBERON:0006240!1.66e-16!41;UBERON:0002616!1.99e-16!59;UBERON:0003080!6.62e-16!42;UBERON:0000924!9.17e-16!173;UBERON:0006601!9.17e-16!173;UBERON:0005172!1.01e-14!55;UBERON:0005173!1.01e-14!55;UBERON:0002020!3.41e-14!34;UBERON:0003528!3.41e-14!34;UBERON:0001893!5.05e-14!34;UBERON:0000489!1.15e-13!32;UBERON:0000033!2.05e-13!123;UBERON:0002791!2.56e-13!33;UBERON:0000025!4.14e-13!194;UBERON:0001869!5.67e-13!32;UBERON:0002113!1.38e-12!27;UBERON:0003918!1.38e-12!27;UBERON:0005095!1.38e-12!27;UBERON:0007687!1.38e-12!27;UBERON:0002417!2.73e-12!61;UBERON:0000916!2.73e-12!61;UBERON:0000153!4.26e-12!129;UBERON:0007811!4.26e-12!129;UBERON:0000956!5.92e-12!25;UBERON:0000203!5.92e-12!25;UBERON:0000483!6.22e-11!309;UBERON:0000119!1.35e-10!312;UBERON:0009773!7.71e-10!12;UBERON:0001231!7.71e-10!12;UBERON:0004810!7.71e-10!12;UBERON:0004111!1.07e-09!241;UBERON:0002619!2.81e-09!22;UBERON:0001950!2.90e-09!20;UBERON:0006554!6.55e-09!44;UBERON:0005177!1.08e-08!107;UBERON:0007023!1.22e-08!115;UBERON:0001008!1.44e-08!45;UBERON:0000475!1.76e-08!365;UBERON:0000477!2.03e-07!286;UBERON:0006555!2.98e-07!17;UBERON:0005103!2.98e-07!17;UBERON:0000083!2.98e-07!17;UBERON:0009201!2.98e-07!17;UBERON:0004819!2.98e-07!17;UBERON:0006553!2.98e-07!17;UBERON:0003074!2.98e-07!17;UBERON:0003060!2.98e-07!17;UBERON:0000481!3.83e-07!347;UBERON:0000922!5.39e-07!612;UBERON:0004876!7.34e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.94e-17;10!UBERON:0009773;2.94e-17;10!UBERON:0001231;2.94e-17;10!UBERON:0004810;2.94e-17;10!UBERON:0002107;2.50e-15;19!UBERON:0006925;2.50e-15;19!UBERON:0005172;1.20e-12;52!UBERON:0005173;1.20e-12;52!UBERON:0002423;3.12e-11;25!UBERON:0006555;3.49e-11;15!UBERON:0004819;3.49e-11;15!UBERON:0001285;3.49e-11;15!UBERON:0007684;3.49e-11;15!UBERON:0002113;7.62e-11;24!UBERON:0011143;7.62e-11;24!UBERON:0000489;9.17e-11;29!UBERON:0002368;1.04e-10;33!UBERON:0000949;1.78e-09;43!UBERON:0002417;4.90e-09;58!UBERON:0000916;4.90e-09;58!UBERON:0002365;1.68e-08;31!UBERON:0002330;1.68e-08;31!UBERON:0006554;2.33e-08;30!UBERON:0001008;2.33e-08;30!UBERON:0001905;2.79e-08;2!UBERON:0002757;2.79e-08;2!UBERON:0010134;2.79e-08;2!UBERON:0005408;2.79e-08;2!UBERON:0001899;2.79e-08;2!UBERON:0001225;1.52e-07;12!UBERON:0008987;1.52e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.33e-18,54;UBERON:0005173,1.33e-18,54;UBERON:0004810,1.93e-17,10;UBERON:0002417,2.67e-16,60;UBERON:0000916,2.67e-16,60;UBERON:0002107,2.18e-15,19;UBERON:0006925,2.18e-15,19;UBERON:0008836,2.18e-15,19;UBERON:0008835,4.75e-13,22;UBERON:0003894,4.75e-13,22;UBERON:0009854,2.09e-12,23;UBERON:0004211,2.66e-11,15;UBERON:0009773,2.66e-11,15;UBERON:0001231,2.66e-11,15;UBERON:0001285,2.66e-11,15;UBERON:0007684,2.66e-11,15;UBERON:0004208,2.66e-11,15;UBERON:0007499,2.82e-11,25;UBERON:0009497,2.82e-11,25;UBERON:0000015,2.82e-11,25;UBERON:0002423,2.82e-11,25;UBERON:0006235,2.82e-11,25;UBERON:0004161,2.82e-11,25;UBERON:0002368,4.06e-11,35;UBERON:0009856,8.93e-11,26;UBERON:0006555,1.56e-10,16;UBERON:0004819,1.56e-10,16;UBERON:0005177,3.51e-10,101;UBERON:0000489,5.15e-10,31;UBERON:0002113,5.64e-10,26;UBERON:0003918,5.64e-10,26;UBERON:0011143,5.64e-10,26;UBERON:0005095,5.64e-10,26;UBERON:0007687,5.64e-10,26;UBERON:0000949,9.22e-10,45;UBERON:0002365,9.20e-09,31;UBERON:0002330,9.20e-09,31;UBERON:0003929,6.73e-08,54;UBERON:0001905,7.84e-08,2;UBERON:0002757,7.84e-08,2;UBERON:0010134,7.84e-08,2;UBERON:0005408,7.84e-08,2;UBERON:0001899,7.84e-08,2;UBERON:0009569,1.03e-07,112;UBERON:0001225,1.42e-07,12;UBERON:0008987,1.42e-07,12;UBERON:0002530,7.61e-07,59 | |||
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|short_description=p3@GLDC | |short_description=p3@GLDC | ||
}} | }} |
Latest revision as of 15:00, 17 September 2015
Short description: | p3@GLDC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GLDC_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000321612_5end |
EntrezGene: | GLDC |
HGNC: | 4313 |
UniProt: | P23378 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.40e-19 | 5 |
kidney tubule cell | 1.93e-17 | 10 |
nephron tubule epithelial cell | 1.93e-17 | 10 |
hepatocyte | 1.30e-15 | 12 |
epithelial cell of nephron | 2.66e-11 | 15 |
kidney cell | 7.42e-10 | 17 |
kidney epithelial cell | 7.42e-10 | 17 |
epithelial cell of large intestine | 7.40e-09 | 2 |
neuronal stem cell | 4.07e-08 | 8 |
kidney cortical cell | 1.42e-07 | 12 |
renal cortical epithelial cell | 1.42e-07 | 12 |