FFCP PHASE1:Hg19::chr14:65170966..65170990,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:65170966..65170990,+
|short_description=p6@PLEKHG3
|description=CAGE_peak_6_at_PLEKHG3_5end
|association_with_transcript=-163bp_to_ENST00000247226_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26030 | |EntrezGene=26030 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20364 | |HGNC=20364 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-163bp_to_ENST00000247226_5end | |||
|cluster_id=chr14:65170966..65170990,+ | |||
|coexpression_cluster_id=C3444 | |||
|description=CAGE_peak_6_at_PLEKHG3_5end | |||
|id=chr14:65170966..65170990,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.74e-13!172;CL:0000566!4.74e-13!172;CL:0002032!3.45e-12!165;CL:0000837!3.45e-12!165;CL:0000791!9.66e-12!18;CL:0000789!9.66e-12!18;CL:0002420!9.66e-12!18;CL:0002419!9.66e-12!18;CL:0000790!9.66e-12!18;CL:0000988!2.90e-11!182;CL:0000738!1.34e-10!140;CL:0000625!6.88e-09!11;CL:0000094!3.15e-08!8;CL:0000763!4.46e-08!112;CL:0000049!4.46e-08!112;CL:0002087!9.58e-08!119;CL:0002393!2.64e-07!9;CL:0002397!2.64e-07!9;CL:0000084!3.46e-07!25;CL:0000827!3.46e-07!25;CL:0002031!8.75e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.24e-24;8!CL:0000791;3.11e-21;18!CL:0000789;3.11e-21;18!CL:0002419;3.11e-21;18!CL:0000625;6.58e-18;11!CL:0000081;1.18e-17;11!CL:0000084;9.75e-15;25!CL:0000623;2.78e-14;3!CL:0000775;5.94e-14;3!CL:0000226;5.00e-13;3!CL:0000842;5.00e-13;3!CL:0000767;1.60e-12;3!CL:0002393;7.01e-07;6!CL:0002397;7.01e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,6.32e-25,8;CL:0000791,2.45e-21,18;CL:0000789,2.45e-21,18;CL:0002420,2.45e-21,18;CL:0002419,2.45e-21,18;CL:0000790,2.45e-21,18;CL:0000738,3.31e-20,136;CL:0000625,5.31e-18,11;CL:0000081,7.25e-18,11;CL:0000037,1.19e-17,168;CL:0000988,2.21e-16,177;CL:0000084,8.25e-15,25;CL:0000827,8.25e-15,25;CL:0002032,1.21e-14,161;CL:0000837,1.21e-14,161;CL:0000623,2.98e-14,3;CL:0000825,2.98e-14,3;CL:0000775,6.22e-14,3;CL:0000226,5.34e-13,3;CL:0000842,5.34e-13,3;CL:0000767,6.04e-13,3;CL:0000838,6.14e-11,52;CL:0002087,7.83e-11,115;CL:0000542,1.12e-10,53;CL:0000051,1.12e-10,53;CL:0002031,5.70e-09,120;CL:0000766,6.81e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000790;3.11e-21;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.83e-11!15;UBERON:0000179!1.83e-11!15;UBERON:0000463!1.83e-11!15;UBERON:0002390!1.19e-07!102;UBERON:0003061!1.19e-07!102;UBERON:0002193!5.55e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.55e-32;15!UBERON:0000179;4.55e-32;15!UBERON:0000463;4.55e-32;15!UBERON:0002390;2.71e-13;32!UBERON:0002193;1.49e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.03e-32,15;UBERON:0000179,5.03e-32,15;UBERON:0000463,5.03e-32,15;UBERON:0002390,1.49e-10,98;UBERON:0003061,1.49e-10,98;UBERON:0002193,3.41e-09,108 | |||
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| ||
|short_description=p6@PLEKHG3 | |||
}} | }} |
Latest revision as of 01:58, 25 September 2015
Short description: | p6@PLEKHG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PLEKHG3_5end |
Coexpression cluster: | C3444_Neutrophils_CD8_Natural_Whole_CD4_Eosinophils_Peripheral |
Association with transcript: | -163bp_to_ENST00000247226_5end |
EntrezGene: | PLEKHG3 |
HGNC: | 20364 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 6.32e-25 | 8 |
mature alpha-beta T cell | 2.45e-21 | 18 |
alpha-beta T cell | 2.45e-21 | 18 |
immature T cell | 2.45e-21 | 18 |
mature T cell | 2.45e-21 | 18 |
immature alpha-beta T cell | 2.45e-21 | 18 |
leukocyte | 3.31e-20 | 136 |
CD8-positive, alpha-beta T cell | 5.31e-18 | 11 |
blood cell | 7.25e-18 | 11 |
hematopoietic stem cell | 1.19e-17 | 168 |
hematopoietic cell | 2.21e-16 | 177 |
T cell | 8.25e-15 | 25 |
pro-T cell | 8.25e-15 | 25 |
hematopoietic oligopotent progenitor cell | 1.21e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-14 | 161 |
natural killer cell | 2.98e-14 | 3 |
pro-NK cell | 2.98e-14 | 3 |
neutrophil | 6.22e-14 | 3 |
single nucleate cell | 5.34e-13 | 3 |
mononuclear cell | 5.34e-13 | 3 |
basophil | 6.04e-13 | 3 |
lymphoid lineage restricted progenitor cell | 6.14e-11 | 52 |
nongranular leukocyte | 7.83e-11 | 115 |
lymphocyte | 1.12e-10 | 53 |
common lymphoid progenitor | 1.12e-10 | 53 |
hematopoietic lineage restricted progenitor cell | 5.70e-09 | 120 |
myeloid leukocyte | 6.81e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
blood | 5.03e-32 | 15 |
haemolymphatic fluid | 5.03e-32 | 15 |
organism substance | 5.03e-32 | 15 |
hematopoietic system | 1.49e-10 | 98 |
blood island | 1.49e-10 | 98 |
hemolymphoid system | 3.41e-09 | 108 |