FFCP PHASE1:Hg19::chrX:100667014..100667033,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3188 | |EntrezGene=3188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5042 | |HGNC=5042 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=41bp_to_HQ258235,HQ258406_5end | |association_with_transcript=41bp_to_HQ258235,HQ258406_5end | ||
|cluster_id=chrX:100667014..100667033,+ | |||
|description=CAGE_peak_3_at_HNRNPH2_5end | |description=CAGE_peak_3_at_HNRNPH2_5end | ||
|id=chrX:100667014..100667033,+ | |id=chrX:100667014..100667033,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.65e-21!45;CL:0002057!2.04e-20!42;CL:0002009!2.60e-15!65;CL:0002194!4.25e-15!63;CL:0000576!4.25e-15!63;CL:0000040!4.25e-15!63;CL:0000559!4.25e-15!63;CL:0000839!5.18e-13!70;CL:0000557!2.33e-12!71;CL:0000766!1.86e-11!76;CL:0000763!4.78e-08!112;CL:0000049!4.78e-08!112;CL:0002087!2.69e-07!119;CL:0002031!6.31e-07!124 | |ontology_enrichment_celltype=CL:0000860!1.65e-21!45;CL:0002057!2.04e-20!42;CL:0002009!2.60e-15!65;CL:0002194!4.25e-15!63;CL:0000576!4.25e-15!63;CL:0000040!4.25e-15!63;CL:0000559!4.25e-15!63;CL:0000839!5.18e-13!70;CL:0000557!2.33e-12!71;CL:0000766!1.86e-11!76;CL:0000763!4.78e-08!112;CL:0000049!4.78e-08!112;CL:0002087!2.69e-07!119;CL:0002031!6.31e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.93e-31;33!CL:0002057;2.93e-31;33!CL:0000473;5.69e-23;39!CL:0000234;5.69e-23;39!CL:0000576;3.24e-17;48!CL:0000766;1.69e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.92e-33,42;CL:0002057,3.92e-33,42;CL:0000473,2.49e-30,48;CL:0000234,2.49e-30,48;CL:0002194,3.54e-21,59;CL:0000576,3.54e-21,59;CL:0000040,3.54e-21,59;CL:0000559,3.54e-21,59;CL:0002009,5.13e-20,61;CL:0000839,1.85e-18,66;CL:0000766,3.36e-17,72;CL:0000557,5.63e-17,67;CL:0000763,3.08e-10,108;CL:0000049,3.08e-10,108;CL:0002087,2.38e-08,115;CL:0002031,5.73e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.07e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.84e-10!80;UBERON:0001474!6.25e-09!86;UBERON:0004765!1.09e-08!101;UBERON:0001434!1.09e-08!101;UBERON:0002390!5.04e-08!102;UBERON:0003061!5.04e-08!102;UBERON:0002204!6.92e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.19e-13,76;UBERON:0001474,1.78e-11,82;UBERON:0002405,6.69e-10,93;UBERON:0002390,2.08e-09,98;UBERON:0003061,2.08e-09,98;UBERON:0004765,2.21e-09,90;UBERON:0002204,4.22e-08,167;UBERON:0002193,5.69e-08,108;UBERON:0001434,7.68e-08,100 | |||
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| ||
|short_description=p3@HNRNPH2 | |short_description=p3@HNRNPH2 | ||
}} | }} |
Latest revision as of 18:10, 18 September 2015
Short description: | p3@HNRNPH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HNRNPH2_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_HQ258235, HQ258406_5end |
EntrezGene: | HNRNPH2 |
HGNC: | 5042 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.92e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.92e-33 | 42 |
defensive cell | 2.49e-30 | 48 |
phagocyte | 2.49e-30 | 48 |
monopoietic cell | 3.54e-21 | 59 |
monocyte | 3.54e-21 | 59 |
monoblast | 3.54e-21 | 59 |
promonocyte | 3.54e-21 | 59 |
macrophage dendritic cell progenitor | 5.13e-20 | 61 |
myeloid lineage restricted progenitor cell | 1.85e-18 | 66 |
myeloid leukocyte | 3.36e-17 | 72 |
granulocyte monocyte progenitor cell | 5.63e-17 | 67 |
myeloid cell | 3.08e-10 | 108 |
common myeloid progenitor | 3.08e-10 | 108 |
nongranular leukocyte | 2.38e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 5.73e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.19e-13 | 76 |
bone element | 1.78e-11 | 82 |
immune system | 6.69e-10 | 93 |
hematopoietic system | 2.08e-09 | 98 |
blood island | 2.08e-09 | 98 |
skeletal element | 2.21e-09 | 90 |
musculoskeletal system | 4.22e-08 | 167 |
hemolymphoid system | 5.69e-08 | 108 |
skeletal system | 7.68e-08 | 100 |