FFCP PHASE1:Hg19::chr3:100568922..100568933,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:100568922..100568933,- | |||
|coexpression_cluster_id=C404 | |||
|description=CAGE_peak_at_chr3:100568922..100568933,- | |description=CAGE_peak_at_chr3:100568922..100568933,- | ||
|id=chr3:100568922..100568933,- | |id=chr3:100568922..100568933,- | ||
|ontology_enrichment_celltype=CL:0000057!3.48e-07!75 | |ontology_enrichment_celltype=CL:0000057!3.48e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000197;9.80e-18;6!CL:0000098;9.80e-18;6!CL:0002167;9.80e-18;6!CL:0000153;3.48e-12;9!CL:0000447;3.48e-12;9!CL:0000214;7.79e-10;3!CL:0000135;1.86e-09;3!CL:0000388;1.86e-09;3!CL:0000511;2.99e-08;1!CL:0002625;2.99e-08;1!CL:0000216;2.99e-08;1!CL:0000499;5.58e-08;28!CL:0000151;2.39e-07;36!CL:0000327;2.40e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,6.96e-18,6;CL:0000098,6.96e-18,6;CL:0002167,6.96e-18,6;CL:0000153,2.98e-12,9;CL:0000447,2.98e-12,9;CL:0000214,5.74e-10,3;CL:0000135,2.85e-09,3;CL:0000388,2.85e-09,3;CL:0000151,2.93e-08,36;CL:0000511,3.10e-08,1;CL:0002625,3.10e-08,1;CL:0000216,3.10e-08,1;CL:0000499,5.93e-08,28;CL:0000327,2.19e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.06e-08;1!UBERON:0004874;1.04e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4235;4.06e-08;1!DOID:2513;1.04e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4235,3.80e-08,1;DOID:2513,7.45e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;7.79e-10;3!UBERON:0007616;7.79e-10;3!UBERON:0002217;7.79e-10;3!UBERON:0002018;7.79e-10;3!UBERON:0007846;1.86e-09;3!UBERON:0000043;1.86e-09;3!UBERON:0007845;1.86e-09;3!UBERON:0001136;2.99e-08;1!UBERON:0001343;2.99e-08;1!UBERON:0004910;2.99e-08;1!UBERON:0004813;2.99e-08;1!UBERON:0000989;1.04e-07;1!UBERON:0008811;1.04e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,5.74e-10,3;UBERON:0007616,5.74e-10,3;UBERON:0002217,5.74e-10,3;UBERON:0002018,5.74e-10,3;UBERON:0007846,2.85e-09,3;UBERON:0000043,2.85e-09,3;UBERON:0007845,2.85e-09,3;UBERON:0001136,3.10e-08,1;UBERON:0001343,3.10e-08,1;UBERON:0004910,3.10e-08,1;UBERON:0005154,3.10e-08,1;UBERON:0005295,3.10e-08,1;UBERON:0004813,3.10e-08,1;UBERON:0005297,3.10e-08,1;UBERON:0005294,3.10e-08,1;UBERON:0010141,3.10e-08,1;UBERON:0005891,3.10e-08,1;UBERON:0000989,9.10e-08,1;UBERON:0008811,9.10e-08,1;UBERON:0006258,9.10e-08,1;UBERON:0005876,9.10e-08,1;UBERON:0004874,9.10e-08,1 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,3.61439152384566,0,2.31754430337318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,1.85372853138506,0.860509862246441,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.896692083310806,0.23486899728753,0,0.140450806702248,0.204154171254893,0,0.309977343527296,0,0.494533858557114,0,0,0,0.125118519871964,0.277064115484183,0,0,0.600952235626387,0,0.538168907066586,0.213557388818567,0.423863802319124,0.300091096084402,0,0,0,0.675105328965065,0,0,0,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0.239624855491583,0,0,0.434343920002738,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87173775377726,2.49800584316026,2.99634588564476,1.17141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.256278298511402,0,0.482561763430822,0,0.308419387605311,0.355123450626254,0.246381468041427,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,3.21367859688319,0.096670718292122,0,0,0,0.214840489736547,0.145016693914229,0,0.178064071293475,0,0,0,0,0,0.62962469366128,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,1.46228093778771,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,1.68886108238131,8.23237232399755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0.921482106297696,0,0.140669416410513,0.111308705022906,0,0,0.996239941255349,0,0,0.102268682502155,0,1.55519793830904,0,0,0,0.394573622547734,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0.171986032471617,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0,0.101998217636322,0,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,1.08599920350743,0,0.653174720218818,0,0,0.340776043570843,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,1.66441758450784,0.757612021100357,0.251567901752575,0,1.37304041038154,0.907385542579434,0,0.73927574994817,0.955780602982214,0.899606224327209,0,2.07353103920428,0.53168342911599,0,0,0,0.813741466409323,0,0.429642228169954,0.464033759878494,0.796191777397232,0,0.343395705182793,0,0,0,0,0,0.906823702049089,0.231522474323834,0.244736704506468,1.4327107286519,0,0,1.41351316756705,0,0.506827321959218,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,1.52552838186867,0,0,0.0752103283492573,0.20170506870352,0,0,0.982631505060581,0,0,0,0,0.0634158101939068,0.546974809018219,0,1.48863353516788,0,0.255524855279191,0,0.336283722218824,0,0,0.354809480650555,0,0.514464028312255,0,0,0,0.333694205676207,0.078493092850514,0.471346769748006,0,0,0,0,0.714765441766563,0,0,0,0,0.414432328326074,1.53646629384555,0,0,0.354996002191696,0.255640214277473,0,0,0,0,0,0,0,0,0,2.3196288626764,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.874238242015829,0,1.22574160876953,0,0,0.297046400327086,0,2.37897960562944,0,0,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0,0.436350690340377,0,1.11598505450025,0.924351257262837,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.714193294391221,0,0,1.00918676322552,0,1.0105859447911,0,0,0.0673520530145875,0.143444410785353,0.332660356546013,0,0.106727345877715,0,0,2.34640942403454,0.122241444182866,0,0,0.402547587182052,0 | |phase1_expression=0.54503513781167,0.214100523890983,0,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,3.61439152384566,0,2.31754430337318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,1.85372853138506,0.860509862246441,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.896692083310806,0.23486899728753,0,0.140450806702248,0.204154171254893,0,0.309977343527296,0,0.494533858557114,0,0,0,0.125118519871964,0.277064115484183,0,0,0.600952235626387,0,0.538168907066586,0.213557388818567,0.423863802319124,0.300091096084402,0,0,0,0.675105328965065,0,0,0,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0.239624855491583,0,0,0.434343920002738,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87173775377726,2.49800584316026,2.99634588564476,1.17141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.256278298511402,0,0.482561763430822,0,0.308419387605311,0.355123450626254,0.246381468041427,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,3.21367859688319,0.096670718292122,0,0,0,0.214840489736547,0.145016693914229,0,0.178064071293475,0,0,0,0,0,0.62962469366128,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,1.46228093778771,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,1.68886108238131,8.23237232399755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0.921482106297696,0,0.140669416410513,0.111308705022906,0,0,0.996239941255349,0,0,0.102268682502155,0,1.55519793830904,0,0,0,0.394573622547734,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0.171986032471617,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0,0.101998217636322,0,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,1.08599920350743,0,0.653174720218818,0,0,0.340776043570843,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,1.66441758450784,0.757612021100357,0.251567901752575,0,1.37304041038154,0.907385542579434,0,0.73927574994817,0.955780602982214,0.899606224327209,0,2.07353103920428,0.53168342911599,0,0,0,0.813741466409323,0,0.429642228169954,0.464033759878494,0.796191777397232,0,0.343395705182793,0,0,0,0,0,0.906823702049089,0.231522474323834,0.244736704506468,1.4327107286519,0,0,1.41351316756705,0,0.506827321959218,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,1.52552838186867,0,0,0.0752103283492573,0.20170506870352,0,0,0.982631505060581,0,0,0,0,0.0634158101939068,0.546974809018219,0,1.48863353516788,0,0.255524855279191,0,0.336283722218824,0,0,0.354809480650555,0,0.514464028312255,0,0,0,0.333694205676207,0.078493092850514,0.471346769748006,0,0,0,0,0.714765441766563,0,0,0,0,0.414432328326074,1.53646629384555,0,0,0.354996002191696,0.255640214277473,0,0,0,0,0,0,0,0,0,2.3196288626764,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.874238242015829,0,1.22574160876953,0,0,0.297046400327086,0,2.37897960562944,0,0,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0,0.436350690340377,0,1.11598505450025,0.924351257262837,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.714193294391221,0,0,1.00918676322552,0,1.0105859447911,0,0,0.0673520530145875,0.143444410785353,0.332660356546013,0,0.106727345877715,0,0,2.34640942403454,0.122241444182866,0,0,0.402547587182052,0 | ||
|short_description=p@chr3:100568922..100568933,- | |short_description=p@chr3:100568922..100568933,- | ||
}} | }} |
Latest revision as of 13:40, 29 July 2015
Short description: | p@chr3:100568922..100568933, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:100568922..100568933, - |
Coexpression cluster: | C404_Fibroblast_mesenchymal_Synoviocyte_Smooth_basal_mesodermal_Chondrocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 6.96e-18 | 6 |
sensory epithelial cell | 6.96e-18 | 6 |
olfactory epithelial cell | 6.96e-18 | 6 |
GAG secreting cell | 2.98e-12 | 9 |
carbohydrate secreting cell | 2.98e-12 | 9 |
synovial cell | 5.74e-10 | 3 |
fibrocyte | 2.85e-09 | 3 |
tendon cell | 2.85e-09 | 3 |
secretory cell | 2.93e-08 | 36 |
androgen binding protein secreting cell | 3.10e-08 | 1 |
seminiferous tubule epithelial cell | 3.10e-08 | 1 |
Sertoli cell | 3.10e-08 | 1 |
stromal cell | 5.93e-08 | 28 |
extracellular matrix secreting cell | 2.19e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 5.74e-10 | 3 |
layer of synovial tissue | 5.74e-10 | 3 |
synovial joint | 5.74e-10 | 3 |
synovial membrane of synovial joint | 5.74e-10 | 3 |
dense regular connective tissue | 2.85e-09 | 3 |
tendon | 2.85e-09 | 3 |
regular connective tissue | 2.85e-09 | 3 |
mesothelium | 3.10e-08 | 1 |
seminiferous tubule of testis | 3.10e-08 | 1 |
epithelium of male gonad | 3.10e-08 | 1 |
epithelial cord | 3.10e-08 | 1 |
sex cord | 3.10e-08 | 1 |
seminiferous tubule epithelium | 3.10e-08 | 1 |
testis sex cord | 3.10e-08 | 1 |
genital ridge | 3.10e-08 | 1 |
primitive sex cord of indifferent gonad | 3.10e-08 | 1 |
coelomic epithelium | 3.10e-08 | 1 |
penis | 9.10e-08 | 1 |
intromittent organ | 9.10e-08 | 1 |
lateral plate mesenchyme | 9.10e-08 | 1 |
undifferentiated genital tubercle | 9.10e-08 | 1 |
somatopleure | 9.10e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 3.80e-08 | 1 |
basal cell carcinoma | 7.45e-08 | 1 |