FFCP PHASE1:Hg19::chrX:38132865..38132879,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6103 | |EntrezGene=6103 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10295 | |HGNC=10295 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=315bp_to_ENST00000476559_5end | |association_with_transcript=315bp_to_ENST00000476559_5end | ||
|cluster_id=chrX:38132865..38132879,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_7_at_RPGR_5end | |description=CAGE_peak_7_at_RPGR_5end | ||
|id=chrX:38132865..38132879,- | |id=chrX:38132865..38132879,- | ||
|ontology_enrichment_celltype=CL:0002057!1.67e-48!42;CL:0000860!5.63e-45!45;CL:0002087!7.86e-33!119;CL:0002194!2.63e-30!63;CL:0000576!2.63e-30!63;CL:0000040!2.63e-30!63;CL:0000559!2.63e-30!63;CL:0002009!2.97e-29!65;CL:0002031!5.91e-29!124;CL:0000738!4.69e-27!140;CL:0000839!7.01e-27!70;CL:0000557!1.91e-26!71;CL:0000766!1.93e-24!76;CL:0002032!4.42e-22!165;CL:0000837!4.42e-22!165;CL:0000037!6.05e-21!172;CL:0000566!6.05e-21!172;CL:0000988!1.79e-19!182;CL:0000763!3.01e-15!112;CL:0000049!3.01e-15!112;CL:0000134!1.56e-08!358;CL:0002320!3.00e-08!365;CL:0000945!8.92e-08!24;CL:0000826!8.92e-08!24;CL:0000219!3.02e-07!390;CL:0000542!7.77e-07!53;CL:0000051!7.77e-07!53;CL:0000048!9.80e-07!430 | |ontology_enrichment_celltype=CL:0002057!1.67e-48!42;CL:0000860!5.63e-45!45;CL:0002087!7.86e-33!119;CL:0002194!2.63e-30!63;CL:0000576!2.63e-30!63;CL:0000040!2.63e-30!63;CL:0000559!2.63e-30!63;CL:0002009!2.97e-29!65;CL:0002031!5.91e-29!124;CL:0000738!4.69e-27!140;CL:0000839!7.01e-27!70;CL:0000557!1.91e-26!71;CL:0000766!1.93e-24!76;CL:0002032!4.42e-22!165;CL:0000837!4.42e-22!165;CL:0000037!6.05e-21!172;CL:0000566!6.05e-21!172;CL:0000988!1.79e-19!182;CL:0000763!3.01e-15!112;CL:0000049!3.01e-15!112;CL:0000134!1.56e-08!358;CL:0002320!3.00e-08!365;CL:0000945!8.92e-08!24;CL:0000826!8.92e-08!24;CL:0000219!3.02e-07!390;CL:0000542!7.77e-07!53;CL:0000051!7.77e-07!53;CL:0000048!9.80e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.22e-37;33!CL:0002057;7.22e-37;33!CL:0000473;2.92e-27;39!CL:0000234;2.92e-27;39!CL:0000576;4.00e-15;48!CL:0002087;3.82e-14;104!CL:0000766;2.83e-12;69!CL:0000945;5.24e-08;24!CL:0000738;6.75e-08;136!CL:0000763;5.20e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.62e-32,42;CL:0002057,1.62e-32,42;CL:0000473,2.73e-28,48;CL:0000234,2.73e-28,48;CL:0002087,6.07e-24,115;CL:0002031,7.08e-23,120;CL:0002194,2.30e-22,59;CL:0000576,2.30e-22,59;CL:0000040,2.30e-22,59;CL:0000559,2.30e-22,59;CL:0002009,1.34e-21,61;CL:0000738,5.53e-20,136;CL:0000839,6.95e-20,66;CL:0000557,1.43e-19,67;CL:0000766,3.90e-18,72;CL:0002032,1.33e-16,161;CL:0000837,1.33e-16,161;CL:0000037,7.84e-16,168;CL:0000988,6.23e-15,177;CL:0000763,1.14e-11,108;CL:0000049,1.14e-11,108;CL:0000945,5.24e-08,24;CL:0000826,5.24e-08,24 | |||
|ontology_enrichment_development_v019=CL:0002057;5.33e-21;42 | |||
|ontology_enrichment_disease=DOID:0060060!6.99e-07!1;DOID:0060061!6.99e-07!1;DOID:8691!6.99e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;9.17e-13;1!DOID:0060061;9.17e-13;1!DOID:8691;9.17e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,9.73e-13,1;DOID:0060061,9.73e-13,1;DOID:8691,9.73e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!5.15e-23!80;UBERON:0001474!4.03e-21!86;UBERON:0002390!3.71e-19!102;UBERON:0003061!3.71e-19!102;UBERON:0004765!2.29e-17!101;UBERON:0001434!2.29e-17!101;UBERON:0002193!4.72e-17!112;UBERON:0002405!1.72e-16!115;UBERON:0002204!7.64e-09!167;UBERON:0002384!7.33e-08!375;UBERON:0003081!1.40e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.04e-17,76;UBERON:0002405,1.88e-16,93;UBERON:0001474,8.83e-16,82;UBERON:0002390,1.53e-15,98;UBERON:0003061,1.53e-15,98;UBERON:0004765,2.88e-14,90;UBERON:0002193,5.72e-14,108;UBERON:0001434,1.04e-12,100;UBERON:0002204,4.86e-07,167 | |||
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|short_description=p7@RPGR | |short_description=p7@RPGR | ||
}} | }} |
Latest revision as of 23:54, 24 September 2015
Short description: | p7@RPGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RPGR_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 315bp_to_ENST00000476559_5end |
EntrezGene: | RPGR |
HGNC: | 10295 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.62e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.62e-32 | 42 |
defensive cell | 2.73e-28 | 48 |
phagocyte | 2.73e-28 | 48 |
nongranular leukocyte | 6.07e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 7.08e-23 | 120 |
monopoietic cell | 2.30e-22 | 59 |
monocyte | 2.30e-22 | 59 |
monoblast | 2.30e-22 | 59 |
promonocyte | 2.30e-22 | 59 |
macrophage dendritic cell progenitor | 1.34e-21 | 61 |
leukocyte | 5.53e-20 | 136 |
myeloid lineage restricted progenitor cell | 6.95e-20 | 66 |
granulocyte monocyte progenitor cell | 1.43e-19 | 67 |
myeloid leukocyte | 3.90e-18 | 72 |
hematopoietic oligopotent progenitor cell | 1.33e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.33e-16 | 161 |
hematopoietic stem cell | 7.84e-16 | 168 |
hematopoietic cell | 6.23e-15 | 177 |
myeloid cell | 1.14e-11 | 108 |
common myeloid progenitor | 1.14e-11 | 108 |
lymphocyte of B lineage | 5.24e-08 | 24 |
pro-B cell | 5.24e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.04e-17 | 76 |
immune system | 1.88e-16 | 93 |
bone element | 8.83e-16 | 82 |
hematopoietic system | 1.53e-15 | 98 |
blood island | 1.53e-15 | 98 |
skeletal element | 2.88e-14 | 90 |
hemolymphoid system | 5.72e-14 | 108 |
skeletal system | 1.04e-12 | 100 |
musculoskeletal system | 4.86e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 9.73e-13 | 1 |
cutaneous T cell lymphoma | 9.73e-13 | 1 |
mycosis fungoides | 9.73e-13 | 1 |