FFCP PHASE1:Hg19::chr3:14833061..14833093,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:14833061..14833093,+ | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_at_chr3:14833061..14833093,+ | |description=CAGE_peak_at_chr3:14833061..14833093,+ | ||
|id=chr3:14833061..14833093,+ | |id=chr3:14833061..14833093,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.30e-07!4 | |ontology_enrichment_celltype=CL:0002563!1.30e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002327;8.82e-14;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,8.82e-14,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.46e-50;1 | |||
|ontology_enrichment_disease=DOID:1325!2.98e-09!7;DOID:3904!2.98e-09!7;DOID:5409!1.64e-07!4 | |ontology_enrichment_disease=DOID:1325!2.98e-09!7;DOID:3904!2.98e-09!7;DOID:5409!1.64e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;8.82e-14;4!DOID:1612;8.82e-14;4!DOID:1325;2.03e-08;7!DOID:3904;2.03e-08;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.82e-14,4;DOID:1612,8.82e-14,4;DOID:1325,2.03e-08,7;DOID:3904,2.03e-08,7 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.25e-30!57;UBERON:0005068!8.25e-30!57;UBERON:0006241!8.25e-30!57;UBERON:0007135!8.25e-30!57;UBERON:0000200!6.59e-27!6;UBERON:0002616!3.47e-25!59;UBERON:0001950!5.42e-24!20;UBERON:0002619!8.69e-22!22;UBERON:0001872!1.45e-21!5;UBERON:0003076!1.52e-21!15;UBERON:0003057!1.52e-21!15;UBERON:0002020!6.49e-21!34;UBERON:0003528!6.49e-21!34;UBERON:0000988!6.66e-21!3;UBERON:0000955!8.54e-21!69;UBERON:0006238!8.54e-21!69;UBERON:0002771!2.39e-20!3;UBERON:0004733!5.07e-20!12;UBERON:0002028!5.07e-20!12;UBERON:0007277!5.07e-20!12;UBERON:0001017!1.53e-19!82;UBERON:0000956!4.09e-19!25;UBERON:0000203!4.09e-19!25;UBERON:0002680!8.98e-19!9;UBERON:0001895!8.98e-19!9;UBERON:0010092!8.98e-19!9;UBERON:0003075!9.45e-19!86;UBERON:0007284!9.45e-19!86;UBERON:0005743!1.69e-18!86;UBERON:0004732!1.92e-18!13;UBERON:0001869!3.39e-18!32;UBERON:0002346!8.87e-18!90;UBERON:0007023!3.48e-17!115;UBERON:0001893!4.62e-17!34;UBERON:0000073!1.80e-16!94;UBERON:0001016!1.80e-16!94;UBERON:0002148!1.20e-14!2;UBERON:0009662!1.20e-14!2;UBERON:0002791!2.72e-14!33;UBERON:0002780!6.10e-14!41;UBERON:0001890!6.10e-14!41;UBERON:0006240!6.10e-14!41;UBERON:0002298!7.32e-14!8;UBERON:0003080!1.41e-13!42;UBERON:0000033!5.27e-12!123;UBERON:0000153!2.66e-11!129;UBERON:0007811!2.66e-11!129;UBERON:0000025!5.30e-11!194;UBERON:0006331!4.58e-10!3;UBERON:0000064!2.99e-09!219;UBERON:0004121!5.04e-09!169;UBERON:0003056!6.58e-09!61;UBERON:0000924!9.72e-09!173;UBERON:0006601!9.72e-09!173;UBERON:0003112!4.11e-08!1;UBERON:0000032!4.11e-08!1;UBERON:0005253!4.11e-08!1;UBERON:0003128!4.11e-08!1;UBERON:0002241!4.11e-08!1;UBERON:0001703!4.11e-08!1;UBERON:0004761!4.11e-08!1;UBERON:0009617!4.11e-08!1;UBERON:0004111!4.58e-08!241;UBERON:0001871!5.82e-08!7;UBERON:0000483!6.64e-08!309;UBERON:0000119!8.77e-08!312;UBERON:0007190!9.94e-08!1;UBERON:0002581!1.06e-07!1;UBERON:0002022!1.21e-07!1;UBERON:0001242!1.30e-07!4;UBERON:0001262!1.30e-07!4;UBERON:0004786!1.30e-07!4;UBERON:0004808!1.30e-07!4;UBERON:0001277!1.30e-07!4;UBERON:0000477!5.26e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002148;8.10e-26;2!UBERON:0006331;8.10e-26;2!UBERON:0009662;8.10e-26;2!UBERON:0000988;1.03e-17;3!UBERON:0001911;8.82e-14;4!UBERON:0002298;1.50e-09;6!UBERON:0002680;8.61e-07;9!UBERON:0000125;8.61e-07;9!UBERON:0002308;8.61e-07;9!UBERON:0001895;8.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002148,9.18e-26,2;UBERON:0006331,9.18e-26,2;UBERON:0009662,9.18e-26,2;UBERON:0000988,1.12e-17,3;UBERON:0001911,8.82e-14,4;UBERON:0005333,8.82e-14,4;UBERON:0008425,8.82e-14,4;UBERON:0005311,8.82e-14,4;UBERON:0002298,1.57e-09,6;UBERON:0000076,1.49e-07,8;UBERON:0002680,8.85e-07,9;UBERON:0000125,8.85e-07,9;UBERON:0002308,8.85e-07,9;UBERON:0001895,8.85e-07,9;UBERON:0010092,8.85e-07,9 | |||
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|short_description=p@chr3:14833061..14833093,+ | |short_description=p@chr3:14833061..14833093,+ | ||
}} | }} |
Latest revision as of 16:47, 29 July 2015
Short description: | p@chr3:14833061..14833093, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:14833061..14833093, + |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 8.82e-14 | 4 |
Ontology term | p-value | n |
---|---|---|
locus ceruleus | 9.18e-26 | 2 |
brainstem nucleus | 9.18e-26 | 2 |
hindbrain nucleus | 9.18e-26 | 2 |
pons | 1.12e-17 | 3 |
mammary gland | 8.82e-14 | 4 |
mammary bud | 8.82e-14 | 4 |
mammary ridge | 8.82e-14 | 4 |
mammary placode | 8.82e-14 | 4 |
brainstem | 1.57e-09 | 6 |
external ectoderm | 1.49e-07 | 8 |
regional part of metencephalon | 8.85e-07 | 9 |
neural nucleus | 8.85e-07 | 9 |
nucleus of brain | 8.85e-07 | 9 |
metencephalon | 8.85e-07 | 9 |
future metencephalon | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.82e-14 | 4 |
breast cancer | 8.82e-14 | 4 |
bronchus cancer | 2.03e-08 | 7 |
bronchogenic carcinoma | 2.03e-08 | 7 |