FFCP PHASE1:Hg19::chr3:149087215..149087226,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4071 | |EntrezGene=4071 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11853 | |HGNC=11853 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-260bp_to_X75684_5end | |association_with_transcript=-260bp_to_X75684_5end | ||
|cluster_id=chr3:149087215..149087226,- | |||
|description=CAGE_peak_9_at_TM4SF1_5end | |description=CAGE_peak_9_at_TM4SF1_5end | ||
|id=chr3:149087215..149087226,- | |id=chr3:149087215..149087226,- | ||
|ontology_enrichment_celltype=CL:0000066!4.48e-10!254;CL:0005020!3.43e-07!6;CL:0002138!3.43e-07!6;CL:0005022!3.43e-07!6 | |ontology_enrichment_celltype=CL:0000066!4.48e-10!254;CL:0005020!3.43e-07!6;CL:0002138!3.43e-07!6;CL:0005022!3.43e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002138;2.89e-09;6!CL:0002549;1.49e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.99e-09,6;CL:0002138,1.99e-09,6;CL:0005022,1.99e-09,6;CL:0002549,2.12e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.05e-10;29!CL:0005022;2.89e-09;6 | |||
|ontology_enrichment_disease=DOID:305!8.97e-14!106;DOID:0050687!1.88e-11!143;DOID:14566!3.01e-07!239;DOID:162!4.78e-07!235 | |ontology_enrichment_disease=DOID:305!8.97e-14!106;DOID:0050687!1.88e-11!143;DOID:14566!3.01e-07!239;DOID:162!4.78e-07!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.99e-11!9;UBERON:0008947!1.16e-08!38;UBERON:0003258!1.16e-08!38;UBERON:0000477!1.29e-08!286;UBERON:0001557!9.53e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.14e-22;9!UBERON:0001557;2.14e-22;9!UBERON:0002426;8.02e-14;1!UBERON:0003831;8.02e-14;1!UBERON:0003898;8.02e-14;1!UBERON:0004830;8.02e-14;1!UBERON:0003830;8.02e-14;1!UBERON:0005175;8.02e-14;1!UBERON:0001774;8.02e-14;1!UBERON:0001103;8.02e-14;1!UBERON:0005090;1.49e-07;2!UBERON:0001630;1.49e-07;2!UBERON:0005629;1.49e-07;2!UBERON:0005358;1.49e-07;2!UBERON:0001886;1.49e-07;2!UBERON:0004086;1.49e-07;2!UBERON:0005282;1.49e-07;2!UBERON:0005281;1.49e-07;2!UBERON:0000072;2.12e-07;37!UBERON:0001473;3.66e-07;8!UBERON:0004536;3.66e-07;8!UBERON:0006558;3.66e-07;8!UBERON:0000065;4.93e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.18e-22,9;UBERON:0002426,5.15e-14,1;UBERON:0003831,5.15e-14,1;UBERON:0003898,5.15e-14,1;UBERON:0004830,5.15e-14,1;UBERON:0003830,5.15e-14,1;UBERON:0005175,5.15e-14,1;UBERON:0001774,5.15e-14,1;UBERON:0001103,5.15e-14,1;UBERON:0010084,5.15e-14,1;UBERON:0001557,1.24e-10,19;UBERON:0008947,4.23e-08,38;UBERON:0003258,4.23e-08,38;UBERON:0005090,1.20e-07,2;UBERON:0001630,1.20e-07,2;UBERON:0005629,2.12e-07,2;UBERON:0005358,2.12e-07,2;UBERON:0001886,2.12e-07,2;UBERON:0004086,2.12e-07,2;UBERON:0005282,2.12e-07,2;UBERON:0005281,2.12e-07,2;UBERON:0001473,2.77e-07,8;UBERON:0004536,2.77e-07,8;UBERON:0006558,2.77e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0.289693037921647,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.550236083880135,0,0.258416759169329,0.35576626268671,0.66944122552934,0.402829317109147,0,0.24406205754817,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0,1.14734648299525,0,0,0,0,0.311211035399766,0.134710672069688,0.490385709340376,0.454072282934794,1.15235184896,0,0.624320153660641,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375355559615893,0,0,0,0,0,0.538168907066586,0,0,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0.302256294682921,0.169560592310488,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.946454400318751,1.18009283054671,1.20505514941741,1.21323370005633,0.871517776369625,1.18635309555548,0.808987848960987,0.784885860501384,0.38474715694639,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0,0.219500570817251,0,0.301586917234893,0,0,0,0,0,0,0.433099343283221,1.85194205030644,1.52203321787679,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,1.99945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,1.00034104211935,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348631135379878,0.241718899183244,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0.764628819135115,0,0.223874754722178,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0.650060246036521,0,0,0.308097234229289,0,0,0.214840489736547,0.435050081742686,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0.869932992075073,0,0.286249773483982,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,1.26377536871694,0,0.731140468893853,0,0,0,0,0,0,1.31535265576129,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0.358042349351218,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.341380344856499,0.254253650292766,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0.19566461893209,0.485560759068186,0,0,0,0,0,0,0,0.661983911750998,0,0,0,0.416024019039416,0.173559738335131,0.0979923974143777,0.0870592065804026,0,0.51595809741485,1.45134496933628,0.950161122120412,0.903270027585302,0,0,0.225980740780532,0.137041924646751,0,0,0,0,0,0.19980960958213,0.288180834308212,0,0,1.7286575758578,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0.669514372325618,0,0.360299883542404,0,0.0787831823072236,0.0824158583811665,0.337017719270924,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0.316801009558219,1.6135860539956,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.427149650270779,0.314408610199332,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0.573409195690071,0.110929051536852,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0.947015026375446,0.50313580350515,0.889811221596536,0,0.302461847526478,0.15543720058278,0.591420599958536,0.796483835818512,0.449803112163605,0,0,0,0.521745061811734,0.450772826991655,0.761610424337591,0.813741466409323,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0,0,0,0.192619830407303,0.857766365499703,0,0,0,0,0.179088841081487,0.617602894321944,0.438568099157414,0.530067437837643,0.38582807654183,0.337884881306145,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,0.231051332300676,0,0.690359926060101,0,0,0,0,0,0.982631505060581,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0.709163045303809,0.444925607568277,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0.691259661814092,0,0.118332000730565,0.426067023795788,0,0.68732060563215,0.62041277132864,0,0,0,0.121917924982269,0,0.102662806856247,0,0.485710993059139,0,0.198950775161368,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0,0,0.342233301085281,0,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| ||
|short_description=p9@TM4SF1 | |short_description=p9@TM4SF1 | ||
}} | }} |
Latest revision as of 21:19, 15 September 2015
Short description: | p9@TM4SF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TM4SF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -260bp_to_X75684_5end |
EntrezGene: | TM4SF1 |
HGNC: | 11853 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.99e-09 | 6 |
endothelial cell of lymphatic vessel | 1.99e-09 | 6 |
vascular lymphangioblast | 1.99e-09 | 6 |
fibroblast of choroid plexus | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.18e-22 | 9 |
chest muscle | 5.15e-14 | 1 |
respiratory system muscle | 5.15e-14 | 1 |
skeletal muscle of trunk | 5.15e-14 | 1 |
respiratory system skeletal muscle | 5.15e-14 | 1 |
thoracic segment muscle | 5.15e-14 | 1 |
chest organ | 5.15e-14 | 1 |
muscle of trunk | 5.15e-14 | 1 |
diaphragm | 5.15e-14 | 1 |
future diaphragm | 5.15e-14 | 1 |
upper respiratory tract | 1.24e-10 | 19 |
respiratory primordium | 4.23e-08 | 38 |
endoderm of foregut | 4.23e-08 | 38 |
muscle structure | 1.20e-07 | 2 |
muscle organ | 1.20e-07 | 2 |
vascular plexus | 2.12e-07 | 2 |
ventricle of nervous system | 2.12e-07 | 2 |
choroid plexus | 2.12e-07 | 2 |
brain ventricle | 2.12e-07 | 2 |
ventricular system of brain | 2.12e-07 | 2 |
ventricular system of central nervous system | 2.12e-07 | 2 |
lymphatic vessel | 2.77e-07 | 8 |
lymph vasculature | 2.77e-07 | 8 |
lymphatic part of lymphoid system | 2.77e-07 | 8 |