FFCP PHASE1:Hg19::chr3:158450475..158450494,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5918 | |EntrezGene=5918 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9867 | |HGNC=9867 | ||
|TSSclassifier=strong | |||
|UniProt=P49788 | |UniProt=P49788 | ||
|association_with_transcript=0bp_to_ENST00000237696_5end | |association_with_transcript=0bp_to_ENST00000237696_5end | ||
|cluster_id=chr3:158450475..158450494,- | |||
|coexpression_cluster_id=C463 | |||
|description=CAGE_peak_6_at_RARRES1_5end | |description=CAGE_peak_6_at_RARRES1_5end | ||
|id=chr3:158450475..158450494,- | |id=chr3:158450475..158450494,- | ||
|ontology_enrichment_celltype=CL:0000187!1.03e-07!54;CL:0000183!2.48e-07!59;CL:0000680!5.43e-07!57;CL:0000056!5.43e-07!57;CL:0000355!5.43e-07!57;CL:0000222!6.25e-07!119 | |ontology_enrichment_celltype=CL:0000187!1.03e-07!54;CL:0000183!2.48e-07!59;CL:0000680!5.43e-07!57;CL:0000056!5.43e-07!57;CL:0000355!5.43e-07!57;CL:0000222!6.25e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002593;2.54e-13;2!CL:0000077;4.49e-12;19!CL:0000746;1.80e-09;3!CL:0002564;3.53e-09;3!CL:0002622;3.53e-09;3!CL:0000511;4.88e-08;1!CL:0002625;4.88e-08;1!CL:0000216;4.88e-08;1!CL:0002591;1.68e-07;1!CL:0000737;2.63e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,2.39e-13,2;CL:0000077,4.42e-12,19;CL:0000222,3.90e-10,121;CL:0000746,1.66e-09,3;CL:0000513,1.66e-09,3;CL:0002564,4.35e-09,3;CL:0002622,5.13e-09,3;CL:0000511,4.89e-08,1;CL:0002625,4.89e-08,1;CL:0000216,4.89e-08,1;CL:0000187,1.07e-07,55;CL:0000737,2.47e-07,4;CL:0002591,2.63e-07,1;CL:0000680,3.15e-07,58;CL:0000056,3.15e-07,58;CL:0000355,3.15e-07,58;CL:0000393,8.36e-07,61;CL:0000211,8.36e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000513;1.80e-09;3!UBERON:0010227;7.25e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004122!8.11e-12!15;UBERON:0000162!1.81e-10!14;UBERON:0001353!1.81e-10!14;UBERON:0000163!1.81e-10!14;UBERON:0006866!1.81e-10!14;UBERON:0000164!1.81e-10!14;UBERON:0000931!1.81e-10!14;UBERON:0005256!8.95e-10!143;UBERON:0000490!1.05e-08!138;UBERON:0000481!1.32e-08!347;UBERON:0000119!1.72e-08!312;UBERON:0003101!2.64e-08!22;UBERON:0000079!2.64e-08!22;UBERON:0000483!2.87e-08!309;UBERON:0002385!5.43e-08!63;UBERON:0001015!5.43e-08!63;UBERON:0000383!5.43e-08!63;UBERON:0002367!2.51e-07!11;UBERON:0010147!2.51e-07!11;UBERON:0009846!2.51e-07!11;UBERON:0003353!2.51e-07!11;UBERON:0004902!2.51e-07!11;UBERON:0003820!2.51e-07!11;UBERON:0009847!2.51e-07!11;UBERON:0003064!3.12e-07!37;UBERON:0007100!4.88e-07!27;UBERON:0001046!5.70e-07!19;UBERON:0001134!7.17e-07!61;UBERON:0002036!7.17e-07!61;UBERON:0003082!7.17e-07!61;UBERON:0002100!9.54e-07!216 | |ontology_enrichment_uberon=UBERON:0004122!8.11e-12!15;UBERON:0000162!1.81e-10!14;UBERON:0001353!1.81e-10!14;UBERON:0000163!1.81e-10!14;UBERON:0006866!1.81e-10!14;UBERON:0000164!1.81e-10!14;UBERON:0000931!1.81e-10!14;UBERON:0005256!8.95e-10!143;UBERON:0000490!1.05e-08!138;UBERON:0000481!1.32e-08!347;UBERON:0000119!1.72e-08!312;UBERON:0003101!2.64e-08!22;UBERON:0000079!2.64e-08!22;UBERON:0000483!2.87e-08!309;UBERON:0002385!5.43e-08!63;UBERON:0001015!5.43e-08!63;UBERON:0000383!5.43e-08!63;UBERON:0002367!2.51e-07!11;UBERON:0010147!2.51e-07!11;UBERON:0009846!2.51e-07!11;UBERON:0003353!2.51e-07!11;UBERON:0004902!2.51e-07!11;UBERON:0003820!2.51e-07!11;UBERON:0009847!2.51e-07!11;UBERON:0003064!3.12e-07!37;UBERON:0007100!4.88e-07!27;UBERON:0001046!5.70e-07!19;UBERON:0001134!7.17e-07!61;UBERON:0002036!7.17e-07!61;UBERON:0003082!7.17e-07!61;UBERON:0002100!9.54e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;2.54e-13;2!UBERON:0002242;3.53e-09;3!UBERON:0002367;3.66e-09;11!UBERON:0010147;3.66e-09;11!UBERON:0003937;2.08e-08;12!UBERON:0005399;2.08e-08;12!UBERON:0001136;4.88e-08;1!UBERON:0001343;4.88e-08;1!UBERON:0004910;4.88e-08;1!UBERON:0004813;4.88e-08;1!UBERON:0002079;7.25e-08;1!UBERON:0000077;1.04e-07;27!UBERON:0000996;1.68e-07;1!UBERON:0003101;6.17e-07;22!UBERON:0000079;6.17e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004122,1.34e-14,15;UBERON:0002456,2.39e-13,2;UBERON:0005256,2.95e-11,122;UBERON:0000162,6.04e-11,14;UBERON:0001353,6.04e-11,14;UBERON:0000163,6.04e-11,14;UBERON:0006866,6.04e-11,14;UBERON:0000164,6.04e-11,14;UBERON:0000931,6.04e-11,14;UBERON:0003064,2.99e-10,28;UBERON:0003104,4.06e-10,160;UBERON:0009142,4.06e-10,160;UBERON:0002367,3.67e-09,11;UBERON:0010147,3.67e-09,11;UBERON:0009846,3.67e-09,11;UBERON:0003353,3.67e-09,11;UBERON:0004902,3.67e-09,11;UBERON:0003820,3.67e-09,11;UBERON:0009847,3.67e-09,11;UBERON:0002242,4.35e-09,3;UBERON:0003068,4.35e-09,3;UBERON:0002328,4.35e-09,3;UBERON:0004880,4.35e-09,3;UBERON:0003937,2.08e-08,12;UBERON:0005399,2.08e-08,12;UBERON:0001136,4.89e-08,1;UBERON:0001343,4.89e-08,1;UBERON:0004910,4.89e-08,1;UBERON:0005154,4.89e-08,1;UBERON:0005295,4.89e-08,1;UBERON:0004813,4.89e-08,1;UBERON:0005297,4.89e-08,1;UBERON:0005294,4.89e-08,1;UBERON:0010141,4.89e-08,1;UBERON:0005891,4.89e-08,1;UBERON:0001046,5.23e-08,19;UBERON:0002079,7.76e-08,1;UBERON:0000996,8.84e-08,1;UBERON:0000490,1.80e-07,148;UBERON:0000077,3.71e-07,29;UBERON:0003101,6.18e-07,22;UBERON:0000079,6.18e-07,22 | |||
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|short_description=p6@RARRES1 | |short_description=p6@RARRES1 | ||
}} | }} |
Latest revision as of 09:05, 16 September 2015
Short description: | p6@RARRES1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RARRES1_5end |
Coexpression cluster: | C463_Mesothelial_mesothelioma_Sertoli_mesenchymal_vagina_Cardiac_Fibroblast |
Association with transcript: | 0bp_to_ENST00000237696_5end |
EntrezGene: | RARRES1 |
HGNC: | 9867 |
UniProt: | P49788 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 2.39e-13 | 2 |
mesothelial cell | 4.42e-12 | 19 |
mesodermal cell | 3.90e-10 | 121 |
cardiac muscle cell | 1.66e-09 | 3 |
cardiac muscle myoblast | 1.66e-09 | 3 |
nucleus pulposus cell of intervertebral disc | 4.35e-09 | 3 |
prostate stromal cell | 5.13e-09 | 3 |
androgen binding protein secreting cell | 4.89e-08 | 1 |
seminiferous tubule epithelial cell | 4.89e-08 | 1 |
Sertoli cell | 4.89e-08 | 1 |
muscle cell | 1.07e-07 | 55 |
striated muscle cell | 2.47e-07 | 4 |
smooth muscle cell of the pulmonary artery | 2.63e-07 | 1 |
muscle precursor cell | 3.15e-07 | 58 |
myoblast | 3.15e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.15e-07 | 58 |
electrically responsive cell | 8.36e-07 | 61 |
electrically active cell | 8.36e-07 | 61 |