FFCP PHASE1:Hg19::chr3:169487366..169487405,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84517 | |EntrezGene=84517 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q9BYD9 | |UniProt=Q9BYD9 | ||
|association_with_transcript=277bp_to_ENST00000330368,NM_032487,uc003ffs.1_5end | |association_with_transcript=277bp_to_ENST00000330368,NM_032487,uc003ffs.1_5end | ||
|cluster_id=chr3:169487366..169487405,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_ARPM1_5end | |description=CAGE_peak_2_at_ARPM1_5end | ||
|id=chr3:169487366..169487405,- | |id=chr3:169487366..169487405,- | ||
|ontology_enrichment_celltype=CL:0000055!1.36e-11!180;CL:0000183!2.49e-08!59;CL:0000680!3.28e-07!57;CL:0000056!3.28e-07!57;CL:0000355!3.28e-07!57;CL:0000393!4.55e-07!60;CL:0000211!4.55e-07!60 | |ontology_enrichment_celltype=CL:0000055!1.36e-11!180;CL:0000183!2.49e-08!59;CL:0000680!3.28e-07!57;CL:0000056!3.28e-07!57;CL:0000355!3.28e-07!57;CL:0000393!4.55e-07!60;CL:0000211!4.55e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000306;1.36e-11;4!CL:0002222;1.36e-11;4!CL:0002224;1.36e-11;4!CL:0000708;3.83e-09;3!CL:0002559;6.23e-09;5!CL:0002590;1.00e-08;3!CL:0000064;1.36e-08;3!CL:0000067;1.36e-08;3!CL:0005012;1.36e-08;3!CL:0002304;1.36e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.64e-11,4;CL:0002222,1.64e-11,4;CL:0002224,1.64e-11,4;CL:0000708,1.65e-09,3;CL:0002559,4.64e-09,5;CL:0002590,4.91e-09,3;CL:0000064,7.15e-09,3;CL:0000067,7.15e-09,3;CL:0005012,7.15e-09,3;CL:0002304,7.15e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.44e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.66e-11!365;UBERON:0000119!5.90e-10!312;UBERON:0000914!1.47e-09!83;UBERON:0002329!1.47e-09!83;UBERON:0003077!1.47e-09!83;UBERON:0003059!1.47e-09!83;UBERON:0007282!1.47e-09!83;UBERON:0009618!1.47e-09!83;UBERON:0007285!1.47e-09!83;UBERON:0000483!5.48e-09!309;UBERON:0005256!6.17e-09!143;UBERON:0004290!1.04e-08!70;UBERON:0000481!1.50e-08!347;UBERON:0000486!3.25e-08!82;UBERON:0002200!4.06e-08!11;UBERON:0006876!4.06e-08!11;UBERON:0002100!5.17e-08!216;UBERON:0000064!7.37e-08!219;UBERON:0000468!1.42e-07!659;UBERON:0001134!3.46e-07!61;UBERON:0002036!3.46e-07!61;UBERON:0003082!3.46e-07!61;UBERON:0002385!8.22e-07!63;UBERON:0001015!8.22e-07!63;UBERON:0000383!8.22e-07!63 | |ontology_enrichment_uberon=UBERON:0000475!7.66e-11!365;UBERON:0000119!5.90e-10!312;UBERON:0000914!1.47e-09!83;UBERON:0002329!1.47e-09!83;UBERON:0003077!1.47e-09!83;UBERON:0003059!1.47e-09!83;UBERON:0007282!1.47e-09!83;UBERON:0009618!1.47e-09!83;UBERON:0007285!1.47e-09!83;UBERON:0000483!5.48e-09!309;UBERON:0005256!6.17e-09!143;UBERON:0004290!1.04e-08!70;UBERON:0000481!1.50e-08!347;UBERON:0000486!3.25e-08!82;UBERON:0002200!4.06e-08!11;UBERON:0006876!4.06e-08!11;UBERON:0002100!5.17e-08!216;UBERON:0000064!7.37e-08!219;UBERON:0000468!1.42e-07!659;UBERON:0001134!3.46e-07!61;UBERON:0002036!3.46e-07!61;UBERON:0003082!3.46e-07!61;UBERON:0002385!8.22e-07!63;UBERON:0001015!8.22e-07!63;UBERON:0000383!8.22e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0006876;4.37e-18;11!UBERON:0007625;1.37e-14;11!UBERON:0005284;1.81e-13;5!UBERON:0010077;1.36e-11;4!UBERON:0005389;1.36e-11;4!UBERON:0000484;1.36e-11;4!UBERON:0000965;1.36e-11;4!UBERON:0001803;1.36e-11;4!UBERON:0010371;1.59e-11;31!UBERON:0001801;3.89e-11;14!UBERON:0000488;9.11e-11;4!UBERON:0003210;3.83e-09;3!UBERON:0002073;6.23e-09;5!UBERON:0002104;1.03e-08;21!UBERON:0001456;1.03e-08;21!UBERON:0001778;1.36e-08;3!UBERON:0001775;1.36e-08;3!UBERON:0000019;8.11e-08;19!UBERON:0000047;8.11e-08;19!UBERON:0004088;8.11e-08;19!UBERON:0010230;8.11e-08;19!UBERON:0001032;2.10e-07;24!UBERON:0004456;2.10e-07;24!UBERON:0000970;2.35e-07;20!UBERON:0002203;3.60e-07;6!UBERON:0001768;3.60e-07;6!UBERON:0002200;3.60e-07;6!UBERON:0002037;6.50e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,1.87e-18,11;UBERON:0007625,7.40e-15,11;UBERON:0005284,1.79e-13,5;UBERON:0005085,7.16e-12,31;UBERON:0010077,1.64e-11,4;UBERON:0005389,1.64e-11,4;UBERON:0000484,1.64e-11,4;UBERON:0002546,1.64e-11,4;UBERON:0000965,1.64e-11,4;UBERON:0001803,1.64e-11,4;UBERON:0003073,1.64e-11,4;UBERON:0005426,1.64e-11,4;UBERON:0001801,2.42e-11,14;UBERON:0000488,3.20e-11,4;UBERON:0001456,3.25e-10,22;UBERON:0003210,1.65e-09,3;UBERON:0000019,2.03e-09,20;UBERON:0000047,2.03e-09,20;UBERON:0010312,2.03e-09,20;UBERON:0004088,2.03e-09,20;UBERON:0010230,2.03e-09,20;UBERON:0003072,2.03e-09,20;UBERON:0004128,2.03e-09,20;UBERON:0003071,2.03e-09,20;UBERON:0002073,4.64e-09,5;UBERON:0005086,4.64e-09,5;UBERON:0000970,6.95e-09,21;UBERON:0002104,6.95e-09,21;UBERON:0001778,7.15e-09,3;UBERON:0001775,7.15e-09,3;UBERON:0004121,9.97e-08,171;UBERON:0000924,9.97e-08,171;UBERON:0006601,9.97e-08,171;UBERON:0000020,1.50e-07,24;UBERON:0001032,1.50e-07,24;UBERON:0004456,1.50e-07,24;UBERON:0002203,1.83e-07,6;UBERON:0001768,1.83e-07,6;UBERON:0002200,1.83e-07,6;UBERON:0002037,4.10e-07,6;UBERON:0006215,4.10e-07,6 | |||
|phase1_expression=0.54503513781167,1.07050261945492,0.563817616383885,5.00366491765652,0.446961094427288,1.74467704820074,0,1.89515962028049,0.261185628199839,0.245733936501509,0.697801167972428,0.873765488520689,0.527533956456907,1.11389717664042,1.32558950291166,0.672325146451775,0,2.19093027116212,0,1.60057375499824,0.816002764977012,0.940364164434263,0.572471974262113,0.273748850145768,0,0,0,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,1.00267582127178,0.579386075843295,0,0,2.55244006342983,1.33037638477538,1.84453049955565,4.91171533116422,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0,0.626984899610432,0,0.71153252537342,0,0.402829317109147,0.760272105718513,0,0,0.81014194788176,0.357198913136319,0.22452937262617,0,1.53316637465883,0,0.549605231791222,0,0,0.436094052142534,0.993943903390637,0.12663051166458,0.397227542439656,1.14734648299525,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0.404132016209064,0.490385709340376,1.05950199351452,2.30470369792,0,0.936480230490962,0.570471821544449,0.149448680551801,0.23486899728753,0.323745888736263,0.421352420106746,0.408308342509787,0,0.309977343527296,0,0.494533858557114,0,0,0.336672227908132,0.125118519871964,0.554128230968366,0,0,0.300476117813194,0.226864366320042,0.179389635688862,0.427114777637135,0.211931901159562,0.300091096084402,0.618315175430633,0,0.18611685633159,0.843881661206331,0.389748020644795,0.252433774244115,0.736399189138395,0.484938170456436,0,0.503760491138201,0.169560592310488,0.57978255948989,0.272746120590835,0,0.487894824518382,1.06023814657188,0.813357600086629,0.621966330092223,0.504641701751257,0,0,2.57296375277154,1.38134921352481,1.39310378409594,2.88751792667834,0,0.168584690078102,0,0.220587945464788,0,0.474541238222193,0,0,0.38474715694639,0.738155454624648,0,0.8231480226628,0,0,0,1.18157981336281,0.441463099414651,0,1.54411029268673,0.439001141634502,0,0,0.277765335475589,0,0,2.88662684050547,2.55046890945169,1.17408694235822,0.433099343283221,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0.16798212819886,0.567100388969546,0,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0.288239906833923,0,0.190493682876507,0.763976851116555,0,0,0,0,0.571652865261156,2.80327710863402,6.97536110133248,1.9067954313447,0.258543431515556,0,0,0.531876233169741,1.04007436911366,0.514414748524284,0,0.266422179016099,0.428933980974443,0.542621605391443,1.64648067356154,0.65147236858747,0.710783897485092,0,0.602878754119172,0,0.599837947092342,0,0.502257091432126,0,1.91699884393266,0,0,0.434343920002738,0.410952645100767,0.537182889719687,0,0,0,0,1.27047312111232,0,0,0.167516265334349,0,0,0,0,1.47229790062968,0,0.542530047399471,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,1.80567659836631,0,2.0694614258501,0,1.10621501125022,0.434418072340414,1.56640925970192,4.80400793335198,0,0,0,0,1.66435439510497,0.30239029332968,0.496215615637554,0.460385919864187,0.280660094433074,0.768834895534206,1.02341449813341,0.482561763430822,0,0.308419387605311,0.532685175939381,0.328508624055237,0.519254429183621,0.697262270759755,0,1.20303882181971,0,0.229628896329213,0.364182336013434,0.917870904715969,0.451199612907412,0.616122696835318,0,0,0.316654886678627,1.13733384070897,0.510281115829547,0.215915916102139,0,0.812839312631559,0.501689773854853,1.52925763827023,0,0.447749509444357,0,0,0,0,0.650756789328606,0.206082023295445,0,0,0,0,0,0.193341436584244,0.308097234229289,0.921022048356777,0.551346289938122,0.966782203814463,0.435050081742686,0.767039646744908,0.534192213880424,0.165284915360978,0.192190067365106,0,0,0,0.94443704049192,0,0.308033580176089,1.06461206063404,0,0.37064843820784,1.00187420719394,6.32669227911434,1.89827654831236,1.33441135746677,1.535386747868,0,0.318203247925937,0,0.719489830333259,0.54907405947211,0.942499218765491,0.202182481573316,0,0.842516912477962,0,1.46228093778771,0,0.409499734223957,0.282810863907425,2.26016233240486,0,1.32687795048244,1.31535265576129,1.15755106853338,0.655894752046633,0.405820753925408,0,0.845086807596724,0.286822704408103,0.589494246078727,0,0,0.211107635297664,0.329294892959902,0.75894634753143,0.349934720244983,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0.86101074534246,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0,0.324621940274555,0.561594356226918,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0.333698283423817,0,0.278406173895242,0,0,0.66614393599564,0,0,0,0.485442086998054,0,0.284136146806413,0.71623345421307,0.593929361665277,1.22864280839693,0,0.281338832821026,0.222617410045812,0,0,0,0,0.251932747854276,0.20453736500431,0,0.933118762985422,0.359473404589307,0.179021174675609,0,0.197286811273867,0,0,0,0.092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| 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| ||
|short_description=p2@ARPM1 | |short_description=p2@ARPM1 | ||
}} | }} |
Latest revision as of 14:53, 16 September 2015
Short description: | p2@ARPM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARPM1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 277bp_to_ENST00000330368, NM_032487, uc003ffs.1_5end |
EntrezGene: | ARPM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.64e-11 | 4 |
vertebrate lens cell | 1.64e-11 | 4 |
lens epithelial cell | 1.64e-11 | 4 |
leptomeningeal cell | 1.65e-09 | 3 |
hair follicle cell | 4.64e-09 | 5 |
smooth muscle cell of the brain vasculature | 4.91e-09 | 3 |
ciliated cell | 7.15e-09 | 3 |
ciliated epithelial cell | 7.15e-09 | 3 |
multi-ciliated epithelial cell | 7.15e-09 | 3 |
non-pigmented ciliary epithelial cell | 7.15e-09 | 3 |