FFCP PHASE1:Hg19::chr3:191047352..191047366,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152137 | |EntrezGene=152137 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18111 | |HGNC=18111 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IVM0 | |UniProt=Q8IVM0 | ||
|association_with_transcript=478bp_to_ENST00000392456,NM_174908,NM_178335,uc003fsv.2,uc003fsw.2_5end | |association_with_transcript=478bp_to_ENST00000392456,NM_174908,NM_178335,uc003fsv.2,uc003fsw.2_5end | ||
|cluster_id=chr3:191047352..191047366,+ | |||
|description=CAGE_peak_5_at_CCDC50_5end | |description=CAGE_peak_5_at_CCDC50_5end | ||
|id=chr3:191047352..191047366,+ | |id=chr3:191047352..191047366,+ | ||
|ontology_enrichment_celltype=CL:0000222!3.50e-16!119;CL:0002139!1.09e-13!24;CL:0000220!1.54e-12!246;CL:0002371!2.16e-12!591;CL:0002321!6.51e-12!248;CL:0000144!2.50e-10!625;CL:0000071!3.29e-10!18;CL:0002546!3.29e-10!18;CL:0000548!4.64e-10!679;CL:0000004!4.64e-10!679;CL:0000255!4.64e-10!679;CL:0000115!2.62e-09!35;CL:0000012!3.50e-09!682;CL:0000055!6.37e-09!180;CL:0000213!1.56e-08!57;CL:0000215!1.56e-08!57;CL:0002078!2.62e-08!44;CL:0000680!6.86e-08!57;CL:0000056!6.86e-08!57;CL:0000355!6.86e-08!57;CL:0000192!7.92e-08!42;CL:0000514!7.92e-08!42;CL:0000359!1.25e-07!32;CL:0000187!1.42e-07!54 | |ontology_enrichment_celltype=CL:0000222!3.50e-16!119;CL:0002139!1.09e-13!24;CL:0000220!1.54e-12!246;CL:0002371!2.16e-12!591;CL:0002321!6.51e-12!248;CL:0000144!2.50e-10!625;CL:0000071!3.29e-10!18;CL:0002546!3.29e-10!18;CL:0000548!4.64e-10!679;CL:0000004!4.64e-10!679;CL:0000255!4.64e-10!679;CL:0000115!2.62e-09!35;CL:0000012!3.50e-09!682;CL:0000055!6.37e-09!180;CL:0000213!1.56e-08!57;CL:0000215!1.56e-08!57;CL:0002078!2.62e-08!44;CL:0000680!6.86e-08!57;CL:0000056!6.86e-08!57;CL:0000355!6.86e-08!57;CL:0000192!7.92e-08!42;CL:0000514!7.92e-08!42;CL:0000359!1.25e-07!32;CL:0000187!1.42e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002139;6.22e-15;24!CL:0000071;4.32e-11;18!CL:0000115;4.28e-10;36!CL:0002078;2.13e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.43e-17,121;CL:0002139,1.67e-14,24;CL:0002321,1.13e-11,250;CL:0000115,5.15e-11,36;CL:0000071,1.08e-10,18;CL:0002546,1.08e-10,18;CL:0000213,6.61e-10,58;CL:0000215,6.61e-10,58;CL:0002078,2.28e-09,45;CL:0000192,4.18e-08,43;CL:0000514,4.18e-08,43;CL:0000359,1.14e-07,32;CL:0000680,1.28e-07,58;CL:0000056,1.28e-07,58;CL:0000355,1.28e-07,58;CL:0000187,2.83e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002546;4.32e-11;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.81e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000055!1.18e-16!69;UBERON:0004872!1.46e-16!84;UBERON:0002049!1.50e-15!79;UBERON:0007798!1.50e-15!79;UBERON:0001981!8.84e-15!60;UBERON:0007500!8.84e-15!60;UBERON:0004537!8.84e-15!60;UBERON:0006965!8.84e-15!60;UBERON:0004535!1.66e-12!110;UBERON:0001009!3.26e-12!113;UBERON:0003914!1.87e-11!118;UBERON:0001986!3.29e-10!18;UBERON:0004638!3.29e-10!18;UBERON:0004852!3.29e-10!18;UBERON:0000490!6.56e-10!138;UBERON:0001637!7.84e-10!42;UBERON:0003509!7.84e-10!42;UBERON:0004572!7.84e-10!42;UBERON:0000914!3.88e-08!83;UBERON:0002329!3.88e-08!83;UBERON:0003077!3.88e-08!83;UBERON:0003059!3.88e-08!83;UBERON:0007282!3.88e-08!83;UBERON:0009618!3.88e-08!83;UBERON:0007285!3.88e-08!83;UBERON:0000926!4.91e-08!448;UBERON:0004120!4.91e-08!448;UBERON:0006603!4.91e-08!448;UBERON:0002385!5.52e-08!63;UBERON:0001015!5.52e-08!63;UBERON:0000383!5.52e-08!63;UBERON:0000487!6.77e-08!22;UBERON:0000486!1.49e-07!82;UBERON:0001134!1.74e-07!61;UBERON:0002036!1.74e-07!61;UBERON:0003082!1.74e-07!61;UBERON:0005256!2.60e-07!143;UBERON:0006914!3.63e-07!25;UBERON:0004290!5.33e-07!70;UBERON:0004573!9.40e-07!33;UBERON:0004571!9.40e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.32e-11;18!UBERON:0001986;4.32e-11;18!UBERON:0004852;4.32e-11;18!UBERON:0000487;1.38e-08;22!UBERON:0000055;1.70e-08;65!UBERON:0007500;2.22e-08;56!UBERON:0001981;2.22e-08;56!UBERON:0004537;2.22e-08;56!UBERON:0001637;1.12e-07;42!UBERON:0003509;1.12e-07;42!UBERON:0004572;1.12e-07;42!UBERON:0006914;1.53e-07;25!UBERON:0002049;1.90e-07;75!UBERON:0007798;1.90e-07;75 | |||
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| ||
|short_description=p5@CCDC50 | |short_description=p5@CCDC50 | ||
}} | }} |
Latest revision as of 10:33, 17 September 2015
Short description: | p5@CCDC50 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CCDC50_5end |
Coexpression cluster: | NA |
Association with transcript: | 478bp_to_ENST00000392456, NM_174908, NM_178335, uc003fsv.2, uc003fsw.2_5end |
EntrezGene: | CCDC50 |
HGNC: | 18111 |
UniProt: | Q8IVM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.43e-17 | 121 |
endothelial cell of vascular tree | 1.67e-14 | 24 |
embryonic cell | 1.13e-11 | 250 |
endothelial cell | 5.15e-11 | 36 |
blood vessel endothelial cell | 1.08e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.08e-10 | 18 |
lining cell | 6.61e-10 | 58 |
barrier cell | 6.61e-10 | 58 |
meso-epithelial cell | 2.28e-09 | 45 |
smooth muscle cell | 4.18e-08 | 43 |
smooth muscle myoblast | 4.18e-08 | 43 |
vascular associated smooth muscle cell | 1.14e-07 | 32 |
muscle precursor cell | 1.28e-07 | 58 |
myoblast | 1.28e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.28e-07 | 58 |
muscle cell | 2.83e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 4.67e-17 | 83 |
vessel | 1.35e-16 | 68 |
vasculature | 2.46e-15 | 78 |
vascular system | 2.46e-15 | 78 |
epithelial tube open at both ends | 3.14e-15 | 59 |
blood vessel | 3.14e-15 | 59 |
blood vasculature | 3.14e-15 | 59 |
vascular cord | 3.14e-15 | 59 |
cardiovascular system | 1.12e-13 | 109 |
circulatory system | 3.43e-13 | 112 |
epithelial tube | 9.80e-12 | 117 |
blood vessel endothelium | 1.08e-10 | 18 |
endothelium | 1.08e-10 | 18 |
cardiovascular system endothelium | 1.08e-10 | 18 |
artery | 4.23e-10 | 42 |
arterial blood vessel | 4.23e-10 | 42 |
arterial system | 4.23e-10 | 42 |
mesoderm | 2.49e-09 | 315 |
mesoderm-derived structure | 2.49e-09 | 315 |
presumptive mesoderm | 2.49e-09 | 315 |
unilaminar epithelium | 3.94e-09 | 148 |
simple squamous epithelium | 2.94e-08 | 22 |
muscle tissue | 1.11e-07 | 64 |
musculature | 1.11e-07 | 64 |
musculature of body | 1.11e-07 | 64 |
squamous epithelium | 2.65e-07 | 25 |
skeletal muscle tissue | 3.68e-07 | 62 |
striated muscle tissue | 3.68e-07 | 62 |
myotome | 3.68e-07 | 62 |
multilaminar epithelium | 6.17e-07 | 83 |
systemic artery | 8.77e-07 | 33 |
systemic arterial system | 8.77e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.81e-07 | 14 |