FFCP PHASE1:Hg19::chr3:196370159..196370173,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:196370159..196370173,- | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr3:196370159..196370173,- | |description=CAGE_peak_at_chr3:196370159..196370173,- | ||
|id=chr3:196370159..196370173,- | |id=chr3:196370159..196370173,- | ||
|ontology_enrichment_celltype=CL:0000738!7.12e-41!140;CL:0000037!1.16e-39!172;CL:0000566!1.16e-39!172;CL:0000988!8.33e-37!182;CL:0002032!1.96e-34!165;CL:0000837!1.96e-34!165;CL:0002031!1.76e-32!124;CL:0002057!8.71e-32!42;CL:0002087!1.48e-30!119;CL:0000766!5.56e-30!76;CL:0002393!2.83e-29!9;CL:0002397!2.83e-29!9;CL:0000860!2.93e-29!45;CL:0000557!1.26e-27!71;CL:0000763!1.79e-27!112;CL:0000049!1.79e-27!112;CL:0000839!7.53e-26!70;CL:0002009!6.02e-22!65;CL:0002194!1.04e-20!63;CL:0000576!1.04e-20!63;CL:0000040!1.04e-20!63;CL:0000559!1.04e-20!63;CL:0000134!3.00e-14!358;CL:0002320!9.87e-14!365;CL:0000219!6.51e-12!390;CL:0000767!3.32e-11!3;CL:0000048!1.75e-10!430;CL:0000875!2.04e-10!3;CL:0002396!2.04e-10!3;CL:0000842!2.17e-10!3;CL:0000723!3.66e-10!436;CL:0002274!4.59e-10!5;CL:0000457!4.59e-10!5;CL:0002191!4.59e-10!5;CL:0000097!4.59e-10!5;CL:0000831!4.59e-10!5;CL:0002028!4.59e-10!5;CL:0000034!9.50e-10!444;CL:0000224!6.96e-08!4;CL:0000838!3.85e-07!52;CL:0000542!5.90e-07!53;CL:0000051!5.90e-07!53 | |ontology_enrichment_celltype=CL:0000738!7.12e-41!140;CL:0000037!1.16e-39!172;CL:0000566!1.16e-39!172;CL:0000988!8.33e-37!182;CL:0002032!1.96e-34!165;CL:0000837!1.96e-34!165;CL:0002031!1.76e-32!124;CL:0002057!8.71e-32!42;CL:0002087!1.48e-30!119;CL:0000766!5.56e-30!76;CL:0002393!2.83e-29!9;CL:0002397!2.83e-29!9;CL:0000860!2.93e-29!45;CL:0000557!1.26e-27!71;CL:0000763!1.79e-27!112;CL:0000049!1.79e-27!112;CL:0000839!7.53e-26!70;CL:0002009!6.02e-22!65;CL:0002194!1.04e-20!63;CL:0000576!1.04e-20!63;CL:0000040!1.04e-20!63;CL:0000559!1.04e-20!63;CL:0000134!3.00e-14!358;CL:0002320!9.87e-14!365;CL:0000219!6.51e-12!390;CL:0000767!3.32e-11!3;CL:0000048!1.75e-10!430;CL:0000875!2.04e-10!3;CL:0002396!2.04e-10!3;CL:0000842!2.17e-10!3;CL:0000723!3.66e-10!436;CL:0002274!4.59e-10!5;CL:0000457!4.59e-10!5;CL:0002191!4.59e-10!5;CL:0000097!4.59e-10!5;CL:0000831!4.59e-10!5;CL:0002028!4.59e-10!5;CL:0000034!9.50e-10!444;CL:0000224!6.96e-08!4;CL:0000838!3.85e-07!52;CL:0000542!5.90e-07!53;CL:0000051!5.90e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0002393;4.68e-64;6!CL:0002397;4.68e-64;6!CL:0000767;2.62e-46;3!CL:0000094;7.44e-18;8!CL:0000081;3.63e-13;11!CL:0000766;3.63e-10;69!CL:0000576;7.27e-10;48!CL:0000047;6.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,1.65e-46,3;CL:0002393,9.02e-43,9;CL:0002397,9.02e-43,9;CL:0000766,2.54e-24,72;CL:0000094,6.26e-18,8;CL:0000860,1.96e-17,42;CL:0002057,1.96e-17,42;CL:0000763,5.61e-16,108;CL:0000049,5.61e-16,108;CL:0000473,3.32e-15,48;CL:0000234,3.32e-15,48;CL:0000738,5.21e-15,136;CL:0000839,5.75e-14,66;CL:0000557,9.43e-14,67;CL:0000081,3.21e-13,11;CL:0002032,1.60e-12,161;CL:0000837,1.60e-12,161;CL:0002194,4.44e-12,59;CL:0000576,4.44e-12,59;CL:0000040,4.44e-12,59;CL:0000559,4.44e-12,59;CL:0000037,5.87e-12,168;CL:0002009,1.13e-11,61;CL:0000988,2.70e-11,177;CL:0002031,2.01e-09,120;CL:0002087,8.46e-08,115 | |||
|ontology_enrichment_development_v019=CL:0002057;9.11e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.42e-29!102;UBERON:0003061!8.42e-29!102;UBERON:0002193!4.48e-27!112;UBERON:0002371!1.15e-25!80;UBERON:0001474!2.36e-23!86;UBERON:0002405!4.42e-21!115;UBERON:0004765!8.79e-19!101;UBERON:0001434!8.79e-19!101;UBERON:0002384!5.00e-13!375;UBERON:0003081!8.27e-10!216;UBERON:0002204!1.49e-08!167 | |ontology_enrichment_uberon=UBERON:0002390!8.42e-29!102;UBERON:0003061!8.42e-29!102;UBERON:0002193!4.48e-27!112;UBERON:0002371!1.15e-25!80;UBERON:0001474!2.36e-23!86;UBERON:0002405!4.42e-21!115;UBERON:0004765!8.79e-19!101;UBERON:0001434!8.79e-19!101;UBERON:0002384!5.00e-13!375;UBERON:0003081!8.27e-10!216;UBERON:0002204!1.49e-08!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.52e-12,76;UBERON:0001474,3.76e-11,82;UBERON:0004765,4.11e-10,90;UBERON:0002405,9.09e-10,93;UBERON:0002390,3.07e-09,98;UBERON:0003061,3.07e-09,98;UBERON:0001434,4.82e-09,100;UBERON:0002193,2.51e-08,108 | |||
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|short_description=p@chr3:196370159..196370173,- | |short_description=p@chr3:196370159..196370173,- | ||
}} | }} |
Latest revision as of 19:52, 29 July 2015
Short description: | p@chr3:196370159..196370173, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:196370159..196370173, - |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 1.65e-46 | 3 |
intermediate monocyte | 9.02e-43 | 9 |
CD14-positive, CD16-positive monocyte | 9.02e-43 | 9 |
myeloid leukocyte | 2.54e-24 | 72 |
granulocyte | 6.26e-18 | 8 |
classical monocyte | 1.96e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.96e-17 | 42 |
myeloid cell | 5.61e-16 | 108 |
common myeloid progenitor | 5.61e-16 | 108 |
defensive cell | 3.32e-15 | 48 |
phagocyte | 3.32e-15 | 48 |
leukocyte | 5.21e-15 | 136 |
myeloid lineage restricted progenitor cell | 5.75e-14 | 66 |
granulocyte monocyte progenitor cell | 9.43e-14 | 67 |
blood cell | 3.21e-13 | 11 |
hematopoietic oligopotent progenitor cell | 1.60e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-12 | 161 |
monopoietic cell | 4.44e-12 | 59 |
monocyte | 4.44e-12 | 59 |
monoblast | 4.44e-12 | 59 |
promonocyte | 4.44e-12 | 59 |
hematopoietic stem cell | 5.87e-12 | 168 |
macrophage dendritic cell progenitor | 1.13e-11 | 61 |
hematopoietic cell | 2.70e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 2.01e-09 | 120 |
nongranular leukocyte | 8.46e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.52e-12 | 76 |
bone element | 3.76e-11 | 82 |
skeletal element | 4.11e-10 | 90 |
immune system | 9.09e-10 | 93 |
hematopoietic system | 3.07e-09 | 98 |
blood island | 3.07e-09 | 98 |
skeletal system | 4.82e-09 | 100 |
hemolymphoid system | 2.51e-08 | 108 |