FFCP PHASE1:Hg19::chr4:74486068..74486079,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=166824 | |EntrezGene=166824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20796 | |HGNC=20796 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=49bp_to_ENST00000395777_5end | |association_with_transcript=49bp_to_ENST00000395777_5end | ||
|cluster_id=chr4:74486068..74486079,- | |||
|coexpression_cluster_id=C1523 | |||
|description=CAGE_peak_7_at_RASSF6_5end | |description=CAGE_peak_7_at_RASSF6_5end | ||
|id=chr4:74486068..74486079,- | |id=chr4:74486068..74486079,- | ||
|ontology_enrichment_celltype=CL:0000945!2.95e-11!24;CL:0000826!2.95e-11!24;CL:0000785!3.14e-07!2;CL:0000955!3.14e-07!2;CL:0000818!3.14e-07!2;CL:0000954!3.14e-07!2;CL:0000816!3.14e-07!2;CL:0000542!6.15e-07!53;CL:0000051!6.15e-07!53;CL:0002535!8.48e-07!2 | |ontology_enrichment_celltype=CL:0000945!2.95e-11!24;CL:0000826!2.95e-11!24;CL:0000785!3.14e-07!2;CL:0000955!3.14e-07!2;CL:0000818!3.14e-07!2;CL:0000954!3.14e-07!2;CL:0000816!3.14e-07!2;CL:0000542!6.15e-07!53;CL:0000051!6.15e-07!53;CL:0002535!8.48e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000785;5.53e-17;1!CL:0000819;5.53e-17;1!CL:0000945;3.87e-16;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,6.47e-17,1;CL:0000945,3.87e-16,24;CL:0000826,3.87e-16,24;CL:0000785,4.02e-09,2;CL:0000955,4.02e-09,2;CL:0000818,4.02e-09,2;CL:0000954,4.02e-09,2;CL:0000816,4.02e-09,2;CL:0000838,1.91e-07,52;CL:0000542,2.64e-07,53;CL:0000051,2.64e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000954;3.71e-09;2 | |||
|ontology_enrichment_disease=DOID:0060058!3.23e-08!10;DOID:1749!9.84e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.56e-25;10!DOID:0060073;5.53e-17;1!DOID:8675;5.53e-17;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.24e-25,10;DOID:0060073,6.47e-17,1;DOID:8675,6.47e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0000974!2.15e-10!10;UBERON:0004119!1.65e-09!169;UBERON:0000925!1.65e-09!169;UBERON:0006595!1.65e-09!169;UBERON:0001007!1.18e-07!155;UBERON:0001555!1.18e-07!155;UBERON:0007026!1.18e-07!155;UBERON:0004177!2.46e-07!7;UBERON:0002394!2.90e-07!4;UBERON:0003928!2.90e-07!4;UBERON:0003127!5.59e-07!2;UBERON:0003343!7.30e-07!4;UBERON:0004785!7.30e-07!4;UBERON:0001004!8.05e-07!72;UBERON:0006955!8.48e-07!2;UBERON:0004801!8.48e-07!2 | |ontology_enrichment_uberon=UBERON:0000974!2.15e-10!10;UBERON:0004119!1.65e-09!169;UBERON:0000925!1.65e-09!169;UBERON:0006595!1.65e-09!169;UBERON:0001007!1.18e-07!155;UBERON:0001555!1.18e-07!155;UBERON:0007026!1.18e-07!155;UBERON:0004177!2.46e-07!7;UBERON:0002394!2.90e-07!4;UBERON:0003928!2.90e-07!4;UBERON:0003127!5.59e-07!2;UBERON:0003343!7.30e-07!4;UBERON:0004785!7.30e-07!4;UBERON:0001004!8.05e-07!72;UBERON:0006955!8.48e-07!2;UBERON:0004801!8.48e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.17e-31;2!UBERON:0005058;1.17e-31;2!UBERON:0009113;1.17e-31;2!UBERON:0004177;2.68e-13;5!UBERON:0005057;2.68e-13;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.26e-16,4;UBERON:0005058,2.26e-16,4;UBERON:0009113,2.26e-16,4;UBERON:0003295,2.26e-16,4;UBERON:0005562,2.26e-16,4;UBERON:0003351,3.06e-11,6;UBERON:0004177,9.11e-10,7;UBERON:0005057,9.11e-10,7;UBERON:0000974,4.26e-07,10;UBERON:0003408,4.26e-07,10;UBERON:0001042,4.26e-07,10;UBERON:0009145,4.26e-07,10 | |||
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| ||
|short_description=p7@RASSF6 | |short_description=p7@RASSF6 | ||
}} | }} |
Latest revision as of 13:39, 18 September 2015
Short description: | p7@RASSF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RASSF6_5end |
Coexpression cluster: | C1523_diffuse_small_lymphoma_thymus_Burkitt_lymphangiectasia_b |
Association with transcript: | 49bp_to_ENST00000395777_5end |
EntrezGene: | RASSF6 |
HGNC: | 20796 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 6.47e-17 | 1 |
lymphocyte of B lineage | 3.87e-16 | 24 |
pro-B cell | 3.87e-16 | 24 |
mature B cell | 4.02e-09 | 2 |
pre-B-II cell | 4.02e-09 | 2 |
transitional stage B cell | 4.02e-09 | 2 |
small pre-B-II cell | 4.02e-09 | 2 |
immature B cell | 4.02e-09 | 2 |
lymphoid lineage restricted progenitor cell | 1.91e-07 | 52 |
lymphocyte | 2.64e-07 | 53 |
common lymphoid progenitor | 2.64e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.26e-16 | 4 |
hemolymphoid system gland | 2.26e-16 | 4 |
thymic region | 2.26e-16 | 4 |
pharyngeal gland | 2.26e-16 | 4 |
thymus primordium | 2.26e-16 | 4 |
pharyngeal epithelium | 3.06e-11 | 6 |
hemopoietic organ | 9.11e-10 | 7 |
immune organ | 9.11e-10 | 7 |
neck | 4.26e-07 | 10 |
gland of gut | 4.26e-07 | 10 |
chordate pharynx | 4.26e-07 | 10 |
pharyngeal region of foregut | 4.26e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.24e-25 | 10 |
lymphatic system cancer | 6.47e-17 | 1 |
lymphosarcoma | 6.47e-17 | 1 |