FFCP PHASE1:Hg19::chr5:176558815..176558850,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:176558815..176558850,+ | |||
|coexpression_cluster_id=C157 | |||
|description=CAGE_peak_at_chr5:176558815..176558850,+ | |description=CAGE_peak_at_chr5:176558815..176558850,+ | ||
|id=chr5:176558815..176558850,+ | |id=chr5:176558815..176558850,+ | ||
|ontology_enrichment_celltype=CL:0002322!5.64e-12!5;CL:0000188!7.44e-11!9;CL:0000594!3.64e-07!3 | |ontology_enrichment_celltype=CL:0002322!5.64e-12!5;CL:0000188!7.44e-11!9;CL:0000594!3.64e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.39e-45;5!CL:0000039;1.08e-21;7!CL:0000586;1.08e-21;7!CL:0002321;4.14e-15;15!CL:0000540;3.68e-14;6!CL:0000404;3.68e-14;6!CL:0000817;7.40e-11;1!CL:0000148;9.84e-09;10!CL:0002556;8.22e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.50e-45,5;CL:0000039,1.13e-21,7;CL:0000586,1.13e-21,7;CL:0000540,3.44e-14,6;CL:0000031,3.44e-14,6;CL:0000404,3.44e-14,6;CL:0000047,8.80e-11,8;CL:0000148,9.71e-09,10;CL:0000541,9.71e-09,10;CL:0002556,8.47e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.88e-23;10!UBERON:0005564;4.88e-23;10!CL:0000031;3.68e-14;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3111;3.96e-10;1!DOID:3603;3.96e-10;1!DOID:3095;5.09e-07;22!DOID:2994;5.09e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,3.61e-10,1;DOID:3603,3.61e-10,1;DOID:3095,5.18e-07,22;DOID:2994,5.18e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.65e-10!8;UBERON:0003135!4.08e-07!11;UBERON:0005743!5.08e-07!86;UBERON:0001017!7.84e-07!82 | |ontology_enrichment_uberon=UBERON:0000473!3.65e-10!8;UBERON:0003135!4.08e-07!11;UBERON:0005743!5.08e-07!86;UBERON:0001017!7.84e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.11e-19;8!UBERON:0003135;6.79e-14;11!UBERON:0000922;3.84e-11;49!UBERON:0000991;6.44e-11;21!UBERON:0003101;5.09e-07;22!UBERON:0000079;5.09e-07;22!UBERON:0002323;7.16e-07;45!UBERON:0001758;8.22e-07;6!UBERON:0003672;8.22e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.36e-19,8;UBERON:0003135,7.02e-14,11;UBERON:0000991,6.44e-11,21;UBERON:0009196,6.44e-11,21;UBERON:0009117,6.44e-11,21;UBERON:0005564,6.44e-11,21;UBERON:0004176,2.05e-10,22;UBERON:0003101,5.18e-07,22;UBERON:0000079,5.18e-07,22;UBERON:0001758,8.47e-07,6;UBERON:0003672,8.47e-07,6;UBERON:0002323,8.76e-07,46 | |||
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| ||
|short_description=p@chr5:176558815..176558850,+ | |short_description=p@chr5:176558815..176558850,+ | ||
}} | }} |
Latest revision as of 13:34, 30 July 2015
Short description: | p@chr5:176558815..176558850, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:176558815..176558850, + |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.50e-45 | 5 |
germ line cell | 1.13e-21 | 7 |
germ cell | 1.13e-21 | 7 |
neuron | 3.44e-14 | 6 |
neuroblast | 3.44e-14 | 6 |
electrically signaling cell | 3.44e-14 | 6 |
neuronal stem cell | 8.80e-11 | 8 |
melanocyte | 9.71e-09 | 10 |
melanoblast | 9.71e-09 | 10 |
fibroblast of periodontium | 8.47e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 5.36e-19 | 8 |
male reproductive organ | 7.02e-14 | 11 |
gonad | 6.44e-11 | 21 |
indifferent external genitalia | 6.44e-11 | 21 |
indifferent gonad | 6.44e-11 | 21 |
gonad primordium | 6.44e-11 | 21 |
external genitalia | 2.05e-10 | 22 |
male organism | 5.18e-07 | 22 |
male reproductive system | 5.18e-07 | 22 |
periodontium | 8.47e-07 | 6 |
dentition | 8.47e-07 | 6 |
body cavity | 8.76e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 3.61e-10 | 1 |
mucinous cystadenocarcinoma | 3.61e-10 | 1 |
germ cell and embryonal cancer | 5.18e-07 | 22 |
germ cell cancer | 5.18e-07 | 22 |