FFCP PHASE1:Hg19::chr5:191719..191728,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389257 | |EntrezGene=389257 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37268 | |HGNC=37268 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=67bp_to_BC156515,BC172511_5end | |association_with_transcript=67bp_to_BC156515,BC172511_5end | ||
|cluster_id=chr5:191719..191728,+ | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_12_at_LRRC14B_5end | |description=CAGE_peak_12_at_LRRC14B_5end | ||
|id=chr5:191719..191728,+ | |id=chr5:191719..191728,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.46e-50;1!UBERON:0010227;2.42e-50;1!UBERON:0004872;1.89e-08;7 | |||
|ontology_enrichment_disease=DOID:114!8.80e-18!2;DOID:178!1.91e-09!1;DOID:326!1.91e-09!1;DOID:3978!1.91e-09!1;DOID:3394!1.91e-09!1;DOID:5844!1.91e-09!1;DOID:1287!2.36e-09!4 | |||
|ontology_enrichment_disease_v019=DOID:114;8.10e-26;2!DOID:1287;1.21e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.14e-26,2;DOID:1287,1.13e-13,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002079;2.42e-50;1!UBERON:0002081;5.56e-26;2!UBERON:0007100;1.05e-18;25!UBERON:0004151;8.00e-18;3!UBERON:0000948;4.14e-10;22!UBERON:0003103;2.39e-07;61 | |||
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|short_description=p12@LRRC14B | |short_description=p12@LRRC14B | ||
}} | }} |
Latest revision as of 12:34, 17 September 2015
Short description: | p12@LRRC14B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_LRRC14B_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 67bp_to_BC156515, BC172511_5end |
EntrezGene: | LRRC14B |
HGNC: | 37268 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 2.42e-50 | 1 |
cardiac atrium | 5.56e-26 | 2 |
future cardiac atrium | 5.56e-26 | 2 |
cardiac chamber | 8.00e-18 | 3 |
primary circulatory organ | 2.09e-17 | 27 |
heart | 2.35e-09 | 24 |
primitive heart tube | 2.35e-09 | 24 |
primary heart field | 2.35e-09 | 24 |
anterior lateral plate mesoderm | 2.35e-09 | 24 |
heart tube | 2.35e-09 | 24 |
heart primordium | 2.35e-09 | 24 |
cardiac mesoderm | 2.35e-09 | 24 |
cardiogenic plate | 2.35e-09 | 24 |
heart rudiment | 2.35e-09 | 24 |
compound organ | 1.88e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.14e-26 | 2 |
cardiovascular system disease | 1.13e-13 | 4 |