FFCP PHASE1:Hg19::chr6:120583431..120583448,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000492060_5end | |association_with_transcript=0bp_to_ENST00000492060_5end | ||
|cluster_id=chr6:120583431..120583448,+ | |||
|coexpression_cluster_id=C1360 | |||
|description=CAGE_peak_2_at_ENST00000492060_5end | |description=CAGE_peak_2_at_ENST00000492060_5end | ||
|id=chr6:120583431..120583448,+ | |id=chr6:120583431..120583448,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.76e-22!42;CL:0000860!2.57e-21!45;CL:0000839!6.68e-18!70;CL:0000557!1.58e-17!71;CL:0002009!8.99e-17!65;CL:0000766!5.25e-16!76;CL:0002194!1.28e-15!63;CL:0000576!1.28e-15!63;CL:0000040!1.28e-15!63;CL:0000559!1.28e-15!63;CL:0000763!7.74e-15!112;CL:0000049!7.74e-15!112;CL:0002031!1.17e-09!124;CL:0000738!1.01e-08!140;CL:0002032!1.27e-08!165;CL:0000837!1.27e-08!165;CL:0000037!4.63e-08!172;CL:0000566!4.63e-08!172 | |ontology_enrichment_celltype=CL:0002057!2.76e-22!42;CL:0000860!2.57e-21!45;CL:0000839!6.68e-18!70;CL:0000557!1.58e-17!71;CL:0002009!8.99e-17!65;CL:0000766!5.25e-16!76;CL:0002194!1.28e-15!63;CL:0000576!1.28e-15!63;CL:0000040!1.28e-15!63;CL:0000559!1.28e-15!63;CL:0000763!7.74e-15!112;CL:0000049!7.74e-15!112;CL:0002031!1.17e-09!124;CL:0000738!1.01e-08!140;CL:0002032!1.27e-08!165;CL:0000837!1.27e-08!165;CL:0000037!4.63e-08!172;CL:0000566!4.63e-08!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.07e-33;33!CL:0002057;2.07e-33;33!CL:0000473;3.50e-27;39!CL:0000234;3.50e-27;39!CL:0000576;2.18e-19;48!CL:0000766;1.07e-13;69!CL:0000763;1.22e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.14e-36,42;CL:0002057,1.14e-36,42;CL:0000473,1.67e-36,48;CL:0000234,1.67e-36,48;CL:0000839,1.86e-30,66;CL:0000557,2.64e-30,67;CL:0002009,5.70e-28,61;CL:0002194,6.17e-26,59;CL:0000576,6.17e-26,59;CL:0000040,6.17e-26,59;CL:0000559,6.17e-26,59;CL:0000766,2.54e-25,72;CL:0000763,1.08e-23,108;CL:0000049,1.08e-23,108;CL:0002031,3.63e-13,120;CL:0000738,8.85e-12,136;CL:0002032,2.05e-11,161;CL:0000837,2.05e-11,161;CL:0000037,1.06e-10,168;CL:0000988,2.81e-09,177;CL:0002087,1.93e-08,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.45e-26;42!CL:0000049;8.52e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.17e-15!80;UBERON:0001474!2.13e-13!86;UBERON:0004765!9.18e-11!101;UBERON:0001434!9.18e-11!101;UBERON:0002390!2.26e-10!102;UBERON:0003061!2.26e-10!102;UBERON:0002193!1.27e-09!112;UBERON:0002204!2.59e-09!167;UBERON:0002405!7.09e-09!115 | |ontology_enrichment_uberon=UBERON:0002371!7.17e-15!80;UBERON:0001474!2.13e-13!86;UBERON:0004765!9.18e-11!101;UBERON:0001434!9.18e-11!101;UBERON:0002390!2.26e-10!102;UBERON:0003061!2.26e-10!102;UBERON:0002193!1.27e-09!112;UBERON:0002204!2.59e-09!167;UBERON:0002405!7.09e-09!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.32e-08;9!UBERON:0001557;2.32e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.15e-26,76;UBERON:0001474,7.76e-23,82;UBERON:0004765,2.83e-21,90;UBERON:0002405,1.94e-20,93;UBERON:0002390,4.45e-18,98;UBERON:0003061,4.45e-18,98;UBERON:0001434,1.98e-17,100;UBERON:0002193,8.37e-17,108;UBERON:0002204,5.46e-12,167;UBERON:0003081,5.93e-11,203;UBERON:0001737,1.96e-08,9 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,2.53299878168311,1.26343974685366,1.30592814099919,0,0,0,0.263766978228454,0,0,9.41255205032485,7.8350288643117,8.76372108464848,2.43966399395253,0,0,0,0,0.273748850145768,0.251085279189606,0.305653622991805,0.164201178899891,0.236132343941038,0.393364276848904,0.383829398097213,8.05043841243595,0.919421224478927,0.30120591877825,0,0.0774672005803016,0.142169232487422,0.587200878669695,1.10799081706375,0,0.217010870715852,0,0,0.257575567634187,6.54292074508041,5.29026321164333,10.6736986922639,13.4808841405297,10.2791972005456,5.26500830521676,16.3984663623626,24.0791064137355,8.0403958162119,24.8216890130365,18.0735711403471,24.3767675869815,13.5534484470675,5.18521685109907,8.09004544002305,16.2224462956578,11.5534449747394,10.2293940127847,19.4612267110163,10.3721101963249,8.52449501065388,7.83564944297177,17.5889419654253,16.1933784738849,16.0799145764316,14.0800387973454,6.73285418585862,22.3997815974346,9.20694089968912,14.5572698222807,4.85887158517466,3.82687739937078,3.98351426465914,6.06574608191074,4.35512989240368,20.5728750972263,0.285012743741249,3.58050018958362,3.47061892152804,0,0.546138611262131,0,0.853460445133014,0.800791974072025,0,0,0,0.569212969109448,0,0.382273228125229,0,0,12.1156678996535,0,1.96505381374582,1.02800749499755,7.02183280640848,0.32592226663359,0.473447805734733,38.9653456815823,4.01077644786625,12.668054021418,4.65221178625604,5.95768500283034,4.73937882984998,5.72261129263464,7.07082989795807,5.25065033793112,6.0858648004361,6.52460877913066,13.6445822325754,12.5442628565972,5.66546713487831,0,0,7.59059076058509,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0.579297615531196,0,0,1.91793842765295,0,1.00267582127178,0,0,1.94653948121054,0.283604451492204,0,0.175669571386252,0.261958150995425,0.364295288292542,0,0,0.696518949197069,0.930705723632056,0,0,1.85728750664782,0.198762407366705,2.58070378531837,0,0.56530794192401,0.419499436209906,0,1.46296476575767,0.775250277507987,0,0,0,0,0.488124115096339,0,0.81014194788176,0.267899184852239,0.22452937262617,0,3.06633274931766,0,0.549605231791222,0,0,0.436094052142534,0,0.12663051166458,4.8991396900891,0,0,0,2.1349799145941,0.74000264525148,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0.70296429550139,0.312160076830321,0,0.448346041655403,0,0,0,0.204154171254893,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0.919463387397059,0.901428353439581,0.453728732640084,0,0,0.423863802319124,0,0,0,0,2.53164498361899,0.0974370051611986,0,0,1.13152239773168,0,0,0.169560592310488,0.193260853163297,0,0.860413786167011,0,0.132529768321485,0,0.10366105501537,3.02785021050754,4.01475094983413,0,0,1.38134921352481,0,0,2.83936320095625,4.21461725195254,3.61516544825223,2.75734931830985,5.88274499049497,4.98268300133303,4.71909578560575,6.67152981426177,3.07797725557112,0,0,0,0,0,0,0,0,0.122988438543114,4.63233087806019,0.109750285408626,1.1240175325762,0.201057944823262,0,0,0,0,2.20267769452646,1.52631302506568,0,15.7415074276048,8.18092854608773,0,0.858486162094873,0.246217006087397,0,0.148631162288728,0,2.85569617938061,2.97727704209012,0,0,0.383382679165211,0,2.64145302039678,17.8302179365064,17.5826343168693,17.8001831131196,0.825472625798197,1.14596527667483,0,15.3965201420435,0.411309970813294,13.2150945451324,3.71574362419752,0,0,0,0.387815147273333,0,33.81211010224,0,0,0,0,0.266422179016099,0.428933980974443,0,0,0.325736184293735,0.355391948742546,1.58390374586686,0,0.871533458600294,0.499864955910285,10.9461402577071,8.03611346291402,65.3585212397398,0,0,34.2328572097724,0.723906533337896,0,0.179060963239896,0.112085143993527,0.197030760201927,0.215627574859517,0.641715181398742,0,0,0,0.167516265334349,1.27587750330633,0.749007023947182,0,0.414415513436035,0,0,0,1.03985430765404,1.78428988797162,0.788512075169673,3.86566669475954,0.300946099727719,0,0,0,0.553107505625109,0,0,0,0,0,0.426910231213777,0.303127571446259,0,1.20956117331872,0,2.14846762603287,0.561320188866147,0,0,0.64341568457443,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0.460404944679482,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,1.56869953835371,0,0.105551628892876,0,0.340187410553031,0.215915916102139,1.54227252690289,0,0,0,0,0.223874754722178,2.63111851975121,5.49014447152291,0.256450125116389,0.328014645699706,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0,0,0,0.214840489736547,0.725083469571143,0.255679882248303,0,0,0,3.95599408733211,0.6069466851333,0,0,1.3940745403212,0.308033580176089,1.59691809095107,0.869932992075073,0.18532421910392,0,0.372158369359667,0,0.38126038784765,0,0,0.318203247925937,1.56989728039846,0.719489830333259,0.274537029736055,0.471249609382746,0,0,0.421258456238981,0.48763373908959,0.487426979262569,0,0,0.141405431953713,0,0.551365343546124,0,0,1.73632660280006,42.6331588830311,0.405820753925408,0.6196469961995,0,3.29846110069318,1.96498082026242,0,0.354761064070598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| ||
|short_description=p2@ENST00000492060 | |short_description=p2@ENST00000492060 | ||
}} | }} |
Latest revision as of 18:51, 30 July 2015
Short description: | p2@ENST00000492060 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000492060_5end |
Coexpression cluster: | C1360_skeletal_Monocytederived_Smooth_optic_Myoblast_acute_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000492060_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.14e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-36 | 42 |
defensive cell | 1.67e-36 | 48 |
phagocyte | 1.67e-36 | 48 |
myeloid lineage restricted progenitor cell | 1.86e-30 | 66 |
granulocyte monocyte progenitor cell | 2.64e-30 | 67 |
macrophage dendritic cell progenitor | 5.70e-28 | 61 |
monopoietic cell | 6.17e-26 | 59 |
monocyte | 6.17e-26 | 59 |
monoblast | 6.17e-26 | 59 |
promonocyte | 6.17e-26 | 59 |
myeloid leukocyte | 2.54e-25 | 72 |
myeloid cell | 1.08e-23 | 108 |
common myeloid progenitor | 1.08e-23 | 108 |
hematopoietic lineage restricted progenitor cell | 3.63e-13 | 120 |
leukocyte | 8.85e-12 | 136 |
hematopoietic oligopotent progenitor cell | 2.05e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.05e-11 | 161 |
hematopoietic stem cell | 1.06e-10 | 168 |
hematopoietic cell | 2.81e-09 | 177 |
nongranular leukocyte | 1.93e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.15e-26 | 76 |
bone element | 7.76e-23 | 82 |
skeletal element | 2.83e-21 | 90 |
immune system | 1.94e-20 | 93 |
hematopoietic system | 4.45e-18 | 98 |
blood island | 4.45e-18 | 98 |
skeletal system | 1.98e-17 | 100 |
hemolymphoid system | 8.37e-17 | 108 |
musculoskeletal system | 5.46e-12 | 167 |
lateral plate mesoderm | 5.93e-11 | 203 |
larynx | 1.96e-08 | 9 |