FFCP PHASE1:Hg19::chr6:31918397..31918412,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=629 | |EntrezGene=629 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1037 | |HGNC=1037 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-238bp_to_ENST00000482312_5end | |association_with_transcript=-238bp_to_ENST00000482312_5end | ||
|cluster_id=chr6:31918397..31918412,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_15_at_CFB_5end | |description=CAGE_peak_15_at_CFB_5end | ||
|id=chr6:31918397..31918412,+ | |id=chr6:31918397..31918412,+ | ||
|ontology_enrichment_celltype=CL:0000181!4.28e-13!12;CL:0000417!4.28e-13!12;CL:0000668!4.28e-13!12;CL:0000414!4.28e-13!12;CL:0000412!4.28e-13!12;CL:0000182!4.28e-13!12 | |ontology_enrichment_celltype=CL:0000181!4.28e-13!12;CL:0000417!4.28e-13!12;CL:0000668!4.28e-13!12;CL:0000414!4.28e-13!12;CL:0000412!4.28e-13!12;CL:0000182!4.28e-13!12 | ||
|ontology_enrichment_celltype_v019=CL:0000214;3.11e-27;3!CL:0000182;9.09e-16;12!CL:0000153;9.24e-10;9!CL:0000447;9.24e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,3.11e-27,3;CL:0000182,9.09e-16,12;CL:0000153,9.24e-10,9;CL:0000447,9.24e-10,9 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.04e-08;11!UBERON:0009497;5.26e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.98e-12!19;UBERON:0006925!1.98e-12!19;UBERON:0008836!1.98e-12!19;UBERON:0009497!8.58e-11!25;UBERON:0000015!8.58e-11!25;UBERON:0002423!8.58e-11!25;UBERON:0006235!8.58e-11!25;UBERON:0004161!8.58e-11!25;UBERON:0008835!1.98e-10!22;UBERON:0003894!1.98e-10!22;UBERON:0009854!6.99e-10!23;UBERON:0007499!6.44e-09!25;UBERON:0005057!1.71e-08!26;UBERON:0009856!1.71e-08!26;UBERON:0002365!3.45e-08!31;UBERON:0002330!3.45e-08!31;UBERON:0002368!5.57e-07!35 | |ontology_enrichment_uberon=UBERON:0002107!1.98e-12!19;UBERON:0006925!1.98e-12!19;UBERON:0008836!1.98e-12!19;UBERON:0009497!8.58e-11!25;UBERON:0000015!8.58e-11!25;UBERON:0002423!8.58e-11!25;UBERON:0006235!8.58e-11!25;UBERON:0004161!8.58e-11!25;UBERON:0008835!1.98e-10!22;UBERON:0003894!1.98e-10!22;UBERON:0009854!6.99e-10!23;UBERON:0007499!6.44e-09!25;UBERON:0005057!1.71e-08!26;UBERON:0009856!1.71e-08!26;UBERON:0002365!3.45e-08!31;UBERON:0002330!3.45e-08!31;UBERON:0002368!5.57e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;3.11e-27;3!UBERON:0007616;3.11e-27;3!UBERON:0002217;3.11e-27;3!UBERON:0002018;3.11e-27;3!UBERON:0002107;2.58e-26;19!UBERON:0006925;2.58e-26;19!UBERON:0002423;4.60e-20;25!UBERON:0002365;3.45e-16;31!UBERON:0002330;3.45e-16;31!UBERON:0002368;4.99e-14;33!UBERON:0004905;7.30e-11;8!UBERON:0000982;7.30e-11;8!UBERON:0004770;7.30e-11;8!UBERON:0000949;3.09e-10;43!UBERON:0004457;9.24e-10;9!UBERON:0000042;9.24e-10;9!UBERON:0000486;1.52e-07;12!UBERON:0005172;1.91e-07;52!UBERON:0005173;1.91e-07;52!UBERON:0001007;9.95e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,3.11e-27,3;UBERON:0007616,3.11e-27,3;UBERON:0002217,3.11e-27,3;UBERON:0002018,3.11e-27,3;UBERON:0002107,2.32e-26,19;UBERON:0006925,2.32e-26,19;UBERON:0008836,2.32e-26,19;UBERON:0008835,8.36e-23,22;UBERON:0003894,8.36e-23,22;UBERON:0009854,7.98e-22,23;UBERON:0007499,4.25e-20,25;UBERON:0009497,4.25e-20,25;UBERON:0000015,4.25e-20,25;UBERON:0002423,4.25e-20,25;UBERON:0006235,4.25e-20,25;UBERON:0004161,4.25e-20,25;UBERON:0009856,2.47e-19,26;UBERON:0002365,2.99e-16,31;UBERON:0002330,2.99e-16,31;UBERON:0002368,2.05e-14,35;UBERON:0000949,3.05e-11,45;UBERON:0004905,7.30e-11,8;UBERON:0000982,7.30e-11,8;UBERON:0004770,7.30e-11,8;UBERON:0003929,2.19e-09,54;UBERON:0005172,2.19e-09,54;UBERON:0005173,2.19e-09,54;UBERON:0002530,1.35e-08,59;UBERON:0002417,1.87e-08,60;UBERON:0000916,1.87e-08,60;UBERON:0004457,1.52e-07,12;UBERON:0000042,1.52e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32167390902867,0,0,0,0,0,0,0,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0,0.221729397462564,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,25.3510069643662,17.6908899001973,7.68026878685825,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.299918973546171,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974853958525138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26664581178598,4.28083360847872,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.13480708770837,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,2.78449243988357,1.32506888912221,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0.378806010550178,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0.766574565837572,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.320182037633146,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32167390902867,0,0,0,0,0,0,0,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0,0.221729397462564,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,25.3510069643662,17.6908899001973,7.68026878685825,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.299918973546171,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974853958525138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26664581178598,4.28083360847872,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.13480708770837,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,2.78449243988357,1.32506888912221,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0.378806010550178,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0.766574565837572,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.320182037633146,0,0,0,0,0,0,0,0 | ||
|short_description=p15@CFB | |short_description=p15@CFB | ||
}} | }} |
Latest revision as of 01:09, 18 September 2015
Short description: | p15@CFB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CFB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -238bp_to_ENST00000482312_5end |
EntrezGene: | CFB |
HGNC: | 1037 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 3.11e-27 | 3 |
hepatocyte | 9.09e-16 | 12 |
GAG secreting cell | 9.24e-10 | 9 |
carbohydrate secreting cell | 9.24e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 3.11e-27 | 3 |
layer of synovial tissue | 3.11e-27 | 3 |
synovial joint | 3.11e-27 | 3 |
synovial membrane of synovial joint | 3.11e-27 | 3 |
liver | 2.32e-26 | 19 |
digestive gland | 2.32e-26 | 19 |
liver bud | 2.32e-26 | 19 |
hepatic diverticulum | 8.36e-23 | 22 |
liver primordium | 8.36e-23 | 22 |
digestive tract diverticulum | 7.98e-22 | 23 |
epithelial sac | 4.25e-20 | 25 |
epithelium of foregut-midgut junction | 4.25e-20 | 25 |
anatomical boundary | 4.25e-20 | 25 |
hepatobiliary system | 4.25e-20 | 25 |
foregut-midgut junction | 4.25e-20 | 25 |
septum transversum | 4.25e-20 | 25 |
sac | 2.47e-19 | 26 |
exocrine gland | 2.99e-16 | 31 |
exocrine system | 2.99e-16 | 31 |
endocrine gland | 2.05e-14 | 35 |
endocrine system | 3.05e-11 | 45 |
articulation | 7.30e-11 | 8 |
skeletal joint | 7.30e-11 | 8 |
articular system | 7.30e-11 | 8 |
gut epithelium | 2.19e-09 | 54 |
abdomen element | 2.19e-09 | 54 |
abdominal segment element | 2.19e-09 | 54 |
gland | 1.35e-08 | 59 |
abdominal segment of trunk | 1.87e-08 | 60 |
abdomen | 1.87e-08 | 60 |
cavity lining | 1.52e-07 | 12 |
serous membrane | 1.52e-07 | 12 |