FFCP PHASE1:Hg19::chr7:137749779..137749804,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:137749779..137749804,+ | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_at_chr7:137749779..137749804,+ | |description=CAGE_peak_at_chr7:137749779..137749804,+ | ||
|id=chr7:137749779..137749804,+ | |id=chr7:137749779..137749804,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.52e-26!12;CL:0000417!2.52e-26!12;CL:0000668!2.52e-26!12;CL:0000414!2.52e-26!12;CL:0000412!2.52e-26!12;CL:0000182!2.52e-26!12;CL:0002563!1.52e-13!4;CL:0000223!7.16e-13!59;CL:0002322!1.06e-10!5;CL:0002253!1.87e-07!2 | |ontology_enrichment_celltype=CL:0000181!2.52e-26!12;CL:0000417!2.52e-26!12;CL:0000668!2.52e-26!12;CL:0000414!2.52e-26!12;CL:0000412!2.52e-26!12;CL:0000182!2.52e-26!12;CL:0002563!1.52e-13!4;CL:0000223!7.16e-13!59;CL:0002322!1.06e-10!5;CL:0002253!1.87e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.91e-41;12!CL:0002231;8.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.00e-41,12;CL:0000223,1.34e-16,58;CL:0002231,7.76e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.13e-45;11!UBERON:0009497;3.75e-38;13!UBERON:0001041;1.08e-16;30!UBERON:0003104;4.07e-16;31!CL:0000223;3.49e-12;58 | |||
|ontology_enrichment_disease=DOID:178!2.07e-13!1;DOID:326!2.07e-13!1;DOID:3978!2.07e-13!1;DOID:3394!2.07e-13!1;DOID:5844!2.07e-13!1;DOID:7!5.30e-08!39;DOID:114!2.40e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:7;4.48e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,1.49e-08,39 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;2.18e-37;19!UBERON:0006925;2.18e-37;19!UBERON:0002423;1.89e-28;25!UBERON:0002365;1.29e-21;31!UBERON:0002330;1.29e-21;31!UBERON:0002368;6.65e-21;33!UBERON:0000949;8.38e-14;43!UBERON:0002530;9.53e-12;57!UBERON:0002417;6.06e-10;58!UBERON:0000916;6.06e-10;58!UBERON:0005172;1.34e-08;52!UBERON:0005173;1.34e-08;52 | |||
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|short_description=p@chr7:137749779..137749804,+ | |short_description=p@chr7:137749779..137749804,+ | ||
}} | }} |
Latest revision as of 06:29, 31 July 2015
Short description: | p@chr7:137749779..137749804, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:137749779..137749804, + |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.00e-41 | 12 |
endodermal cell | 1.34e-16 | 58 |
epithelial cell of prostate | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 2.32e-37 | 19 |
digestive gland | 2.32e-37 | 19 |
liver bud | 2.32e-37 | 19 |
hepatic diverticulum | 2.74e-32 | 22 |
liver primordium | 2.74e-32 | 22 |
digestive tract diverticulum | 6.85e-31 | 23 |
epithelial sac | 1.98e-28 | 25 |
epithelium of foregut-midgut junction | 1.98e-28 | 25 |
anatomical boundary | 1.98e-28 | 25 |
hepatobiliary system | 1.98e-28 | 25 |
foregut-midgut junction | 1.98e-28 | 25 |
septum transversum | 1.98e-28 | 25 |
sac | 2.43e-27 | 26 |
gut epithelium | 3.73e-23 | 54 |
exocrine gland | 6.03e-23 | 31 |
exocrine system | 6.03e-23 | 31 |
endocrine gland | 2.49e-20 | 35 |
gland | 3.19e-16 | 59 |
endocrine system | 8.13e-16 | 45 |
endo-epithelium | 3.69e-15 | 82 |
abdomen element | 3.56e-13 | 54 |
abdominal segment element | 3.56e-13 | 54 |
abdominal segment of trunk | 7.50e-12 | 60 |
abdomen | 7.50e-12 | 60 |
subdivision of digestive tract | 2.47e-10 | 118 |
digestive system | 2.42e-08 | 145 |
digestive tract | 2.42e-08 | 145 |
primitive gut | 2.42e-08 | 145 |
unilaminar epithelium | 3.18e-08 | 148 |
foregut | 3.88e-08 | 87 |
trunk mesenchyme | 1.04e-07 | 122 |
endoderm-derived structure | 1.60e-07 | 160 |
endoderm | 1.60e-07 | 160 |
presumptive endoderm | 1.60e-07 | 160 |
trunk region element | 5.51e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 1.49e-08 | 39 |