FFCP PHASE1:Hg19::chr7:20257327..20257374,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=346389 | |EntrezGene=346389 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30215 | |HGNC=30215 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZN28 | |UniProt=Q6ZN28 | ||
|association_with_transcript=-300bp_to_ENST00000332878_5end | |association_with_transcript=-300bp_to_ENST00000332878_5end | ||
|cluster_id=chr7:20257327..20257374,- | |||
|coexpression_cluster_id=C224 | |||
|description=CAGE_peak_6_at_MACC1_5end | |description=CAGE_peak_6_at_MACC1_5end | ||
|id=chr7:20257327..20257374,- | |id=chr7:20257327..20257374,- | ||
|ontology_enrichment_celltype=CL:0002076!2.00e-17!43;CL:0000066!4.27e-12!254;CL:0000223!4.94e-11!59;CL:0002251!1.44e-09!21;CL:0002166!1.04e-07!3;CL:0002621!1.35e-07!3;CL:0002159!2.52e-07!13;CL:0002231!3.96e-07!3;CL:0000239!7.02e-07!3;CL:1000615!7.02e-07!3;CL:0002306!7.02e-07!3 | |ontology_enrichment_celltype=CL:0002076!2.00e-17!43;CL:0000066!4.27e-12!254;CL:0000223!4.94e-11!59;CL:0002251!1.44e-09!21;CL:0002166!1.04e-07!3;CL:0002621!1.35e-07!3;CL:0002159!2.52e-07!13;CL:0002231!3.96e-07!3;CL:0000239!7.02e-07!3;CL:1000615!7.02e-07!3;CL:0002306!7.02e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002621;3.56e-23;3!CL:0002166;1.53e-11;3!CL:1001319;3.30e-09;1!CL:1000600;3.30e-09;1!CL:0002537;2.35e-07;5!CL:0002076;3.17e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,4.01e-23,3;CL:0002166,1.74e-11,3;CL:0000066,1.15e-09,253;CL:1001319,2.82e-09,1;CL:1000600,2.82e-09,1;CL:0002076,4.35e-08,42;CL:0002537,2.24e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.54e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!1.97e-11!44;UBERON:0001008!4.57e-11!45;UBERON:0000161!6.17e-11!35;UBERON:0004119!4.69e-10!169;UBERON:0000925!4.69e-10!169;UBERON:0006595!4.69e-10!169;UBERON:0005911!6.01e-10!82;UBERON:0000344!1.19e-09!12;UBERON:0001007!8.16e-09!155;UBERON:0001555!8.16e-09!155;UBERON:0007026!8.16e-09!155;UBERON:0003064!1.11e-08!37;UBERON:0001004!1.38e-08!72;UBERON:0002294!9.47e-08!7;UBERON:0001173!9.47e-08!7;UBERON:0004912!9.47e-08!7;UBERON:0001949!1.35e-07!3;UBERON:0000464!1.40e-07!104;UBERON:0000489!1.68e-07!32;UBERON:0000058!2.45e-07!26;UBERON:0000466!5.08e-07!126;UBERON:0006853!7.02e-07!3;UBERON:0007685!7.02e-07!3;UBERON:0004134!7.02e-07!3;UBERON:0004921!7.25e-07!129;UBERON:0004185!7.25e-07!129 | |ontology_enrichment_uberon=UBERON:0006554!1.97e-11!44;UBERON:0001008!4.57e-11!45;UBERON:0000161!6.17e-11!35;UBERON:0004119!4.69e-10!169;UBERON:0000925!4.69e-10!169;UBERON:0006595!4.69e-10!169;UBERON:0005911!6.01e-10!82;UBERON:0000344!1.19e-09!12;UBERON:0001007!8.16e-09!155;UBERON:0001555!8.16e-09!155;UBERON:0007026!8.16e-09!155;UBERON:0003064!1.11e-08!37;UBERON:0001004!1.38e-08!72;UBERON:0002294!9.47e-08!7;UBERON:0001173!9.47e-08!7;UBERON:0004912!9.47e-08!7;UBERON:0001949!1.35e-07!3;UBERON:0000464!1.40e-07!104;UBERON:0000489!1.68e-07!32;UBERON:0000058!2.45e-07!26;UBERON:0000466!5.08e-07!126;UBERON:0006853!7.02e-07!3;UBERON:0007685!7.02e-07!3;UBERON:0004134!7.02e-07!3;UBERON:0004921!7.25e-07!129;UBERON:0004185!7.25e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;3.56e-23;3!UBERON:0000486;1.08e-15;12!UBERON:0003350;1.90e-15;8!UBERON:0002294;1.55e-10;7!UBERON:0001173;1.55e-10;7!UBERON:0003929;2.88e-10;7!UBERON:0004645;3.30e-09;1!UBERON:0004913;3.30e-09;1!UBERON:0003703;3.30e-09;1!UBERON:0001256;3.30e-09;1!UBERON:0001259;3.30e-09;1!UBERON:0001174;3.30e-09;1!UBERON:0004914;3.30e-09;1!UBERON:0001828;4.77e-09;8!UBERON:0007029;6.98e-09;1!UBERON:0001708;7.14e-09;4!UBERON:0008895;7.14e-09;4!UBERON:0002394;1.23e-08;4!UBERON:0003928;1.23e-08;4!UBERON:0004807;2.01e-08;22!UBERON:0005911;1.07e-07;36!UBERON:0011159;2.92e-07;5!UBERON:0000365;4.49e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.01e-23,3;UBERON:0003350,1.87e-15,8;UBERON:0005911,2.18e-09,82;UBERON:0004645,2.82e-09,1;UBERON:0001256,2.82e-09,1;UBERON:0001259,2.82e-09,1;UBERON:0004913,3.05e-09,1;UBERON:0003703,3.05e-09,1;UBERON:0001174,3.05e-09,1;UBERON:0004914,3.05e-09,1;UBERON:0001828,4.98e-09,8;UBERON:0007029,5.31e-09,1;UBERON:0001708,7.88e-09,4;UBERON:0008895,7.88e-09,4;UBERON:0002294,2.63e-08,9;UBERON:0001173,2.63e-08,9;UBERON:0004912,2.63e-08,9;UBERON:0011159,3.16e-07,5;UBERON:0000365,4.70e-07,5 | |||
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| ||
|short_description=p6@MACC1 | |short_description=p6@MACC1 | ||
}} | }} |
Latest revision as of 15:52, 17 September 2015
Short description: | p6@MACC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MACC1_5end |
Coexpression cluster: | C224_clear_serous_pleomorphic_choriocarcinoma_mesothelioma_amniotic_renal |
Association with transcript: | -300bp_to_ENST00000332878_5end |
EntrezGene: | MACC1 |
HGNC: | 30215 |
UniProt: | Q6ZN28 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 4.01e-23 | 3 |
epithelial cell of Malassez | 1.74e-11 | 3 |
epithelial cell | 1.15e-09 | 253 |
bladder cell | 2.82e-09 | 1 |
lower urinary tract cell | 2.82e-09 | 1 |
endo-epithelial cell | 4.35e-08 | 42 |
amnion mesenchymal stem cell | 2.24e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 4.01e-23 | 3 |
epithelium of mucosa | 1.87e-15 | 8 |
endo-epithelium | 2.18e-09 | 82 |
urinary bladder urothelium | 2.82e-09 | 1 |
wall of urinary bladder | 2.82e-09 | 1 |
mucosa of urinary bladder | 2.82e-09 | 1 |
hepatopancreatic ampulla | 3.05e-09 | 1 |
extrahepatic bile duct | 3.05e-09 | 1 |
common bile duct | 3.05e-09 | 1 |
duodenal papilla | 3.05e-09 | 1 |
gingiva | 4.98e-09 | 8 |
surface | 5.31e-09 | 1 |
jaw skeleton | 7.88e-09 | 4 |
splanchnocranium | 7.88e-09 | 4 |
biliary system | 2.63e-08 | 9 |
biliary tree | 2.63e-08 | 9 |
biliary bud | 2.63e-08 | 9 |
primary subdivision of cranial skeletal system | 3.16e-07 | 5 |
urothelium | 4.70e-07 | 5 |