FFCP PHASE1:Hg19::chr7:98870482..98870519,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84176 | |EntrezGene=84176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=31038 | |HGNC=31038 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-404bp_to_ENST00000330888,NR_002147,uc003upw.2_5end | |association_with_transcript=-404bp_to_ENST00000330888,NR_002147,uc003upw.2_5end | ||
|cluster_id=chr7:98870482..98870519,+ | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_2_at_MYH16_5end | |description=CAGE_peak_2_at_MYH16_5end | ||
|id=chr7:98870482..98870519,+ | |id=chr7:98870482..98870519,+ | ||
|ontology_enrichment_celltype=CL:0000066!8.89e-23!254;CL:0000076!1.02e-13!62;CL:0002076!9.65e-11!43;CL:0000071!1.45e-10!18;CL:0002546!1.45e-10!18;CL:0002621!5.14e-10!3;CL:0002139!2.68e-09!24;CL:0000223!4.71e-09!59;CL:1000497!1.18e-08!18;CL:0002518!1.18e-08!18;CL:1000507!6.19e-08!12;CL:1000494!6.19e-08!12;CL:0002543!2.31e-07!6;CL:0000063!3.50e-07!578;CL:0002327!3.83e-07!4;CL:0002368!6.68e-07!13 | |ontology_enrichment_celltype=CL:0000066!8.89e-23!254;CL:0000076!1.02e-13!62;CL:0002076!9.65e-11!43;CL:0000071!1.45e-10!18;CL:0002546!1.45e-10!18;CL:0002621!5.14e-10!3;CL:0002139!2.68e-09!24;CL:0000223!4.71e-09!59;CL:1000497!1.18e-08!18;CL:0002518!1.18e-08!18;CL:1000507!6.19e-08!12;CL:1000494!6.19e-08!12;CL:0002543!2.31e-07!6;CL:0000063!3.50e-07!578;CL:0002327!3.83e-07!4;CL:0002368!6.68e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002621;5.70e-34;3!CL:0002166;1.65e-15;3!CL:0002327;7.11e-12;4!CL:0002535;6.61e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,3.44e-34,3;CL:0002166,1.53e-15,3;CL:0002327,6.03e-12,4;CL:0000066,1.96e-10,253;CL:0002535,6.42e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.84e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.85e-08;14!DOID:4929;4.82e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.85e-08,14;DOID:4929,4.83e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.45e-10!18;UBERON:0004638!1.45e-10!18;UBERON:0004852!1.45e-10!18;UBERON:0000487!2.66e-10!22;UBERON:0001949!5.14e-10!3;UBERON:0006914!8.05e-09!25;UBERON:0009773!6.19e-08!12;UBERON:0001231!6.19e-08!12;UBERON:0004810!6.19e-08!12;UBERON:0006554!1.34e-07!44;UBERON:0001008!2.29e-07!45;UBERON:0001911!3.83e-07!4;UBERON:0005333!3.83e-07!4;UBERON:0008425!3.83e-07!4;UBERON:0005311!3.83e-07!4 | |ontology_enrichment_uberon=UBERON:0001986!1.45e-10!18;UBERON:0004638!1.45e-10!18;UBERON:0004852!1.45e-10!18;UBERON:0000487!2.66e-10!22;UBERON:0001949!5.14e-10!3;UBERON:0006914!8.05e-09!25;UBERON:0009773!6.19e-08!12;UBERON:0001231!6.19e-08!12;UBERON:0004810!6.19e-08!12;UBERON:0006554!1.34e-07!44;UBERON:0001008!2.29e-07!45;UBERON:0001911!3.83e-07!4;UBERON:0005333!3.83e-07!4;UBERON:0008425!3.83e-07!4;UBERON:0005311!3.83e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;5.70e-34;3!UBERON:0000486;3.23e-15;12!UBERON:0003929;5.95e-15;7!UBERON:0003350;3.70e-13;8!UBERON:0001828;3.70e-13;8!UBERON:0004913;7.88e-13;1!UBERON:0003703;7.88e-13;1!UBERON:0001174;7.88e-13;1!UBERON:0004914;7.88e-13;1!UBERON:0001911;7.11e-12;4!UBERON:0001708;7.11e-12;4!UBERON:0008895;7.11e-12;4!UBERON:0011159;1.11e-09;5!UBERON:0004807;2.33e-08;22!UBERON:0003729;2.64e-08;13!UBERON:0006955;6.61e-07;2!UBERON:0004801;6.61e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.44e-34,3;UBERON:0003350,3.07e-13,8;UBERON:0001828,3.07e-13,8;UBERON:0004913,7.89e-13,1;UBERON:0003703,7.89e-13,1;UBERON:0001174,7.89e-13,1;UBERON:0004914,7.89e-13,1;UBERON:0001911,6.03e-12,4;UBERON:0005333,6.03e-12,4;UBERON:0008425,6.03e-12,4;UBERON:0005311,6.03e-12,4;UBERON:0001708,6.73e-12,4;UBERON:0008895,6.73e-12,4;UBERON:0011159,1.06e-09,5;UBERON:0003729,2.36e-08,13;UBERON:0010188,3.13e-08,6;UBERON:0002539,3.13e-08,6;UBERON:0008816,3.13e-08,6;UBERON:0006955,6.42e-07,2;UBERON:0004801,6.42e-07,2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,1.04497483268405,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0,0.22452937262617,0.112611480483322,1.53316637465883,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67195621010264,1.90922284413584,3.72845974005705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6798212819886,1.13420077793909,1.52249488594842,0.290633938513962,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20303882181971,0.0920809889358963,0.114814448164607,0,0,0.451199612907412,1.07821471946181,0,1.46139224653261,0.949964660035881,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.576570202095319,0.765676274967505,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,7.12142540641574,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0.808815160325942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0.554698692052555,0,0.195984794828755,2.35059857767087,0,0,0,0,0,0,0,0,5.34463506122329,0.794858446811959,0,0,0.480952921509202,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,32.9719072264011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0,0,0,0,0.473328002922261,0.426067023795788,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.8779076847064,2.00603416722921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@MYH16 | |short_description=p2@MYH16 | ||
}} | }} |
Latest revision as of 07:58, 20 September 2015
Short description: | p2@MYH16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYH16_5end |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | -404bp_to_ENST00000330888, NR_002147, uc003upw.2_5end |
EntrezGene: | MYH16 |
HGNC: | 31038 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 3.44e-34 | 3 |
epithelial cell of Malassez | 1.53e-15 | 3 |
mammary gland epithelial cell | 6.03e-12 | 4 |
epithelial cell | 1.96e-10 | 253 |
epithelial cell of cervix | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.44e-34 | 3 |
epithelium of mucosa | 3.07e-13 | 8 |
gingiva | 3.07e-13 | 8 |
hepatopancreatic ampulla | 7.89e-13 | 1 |
extrahepatic bile duct | 7.89e-13 | 1 |
common bile duct | 7.89e-13 | 1 |
duodenal papilla | 7.89e-13 | 1 |
mammary gland | 6.03e-12 | 4 |
mammary bud | 6.03e-12 | 4 |
mammary ridge | 6.03e-12 | 4 |
mammary placode | 6.03e-12 | 4 |
jaw skeleton | 6.73e-12 | 4 |
splanchnocranium | 6.73e-12 | 4 |
primary subdivision of cranial skeletal system | 1.06e-09 | 5 |
mouth mucosa | 2.36e-08 | 13 |
protuberance | 3.13e-08 | 6 |
pharyngeal arch | 3.13e-08 | 6 |
embryonic head | 3.13e-08 | 6 |
uterine epithelium | 6.42e-07 | 2 |
cervix epithelium | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.85e-08 | 14 |
tubular adenocarcinoma | 4.83e-07 | 2 |