FFCP PHASE1:Hg19::chr8:128231499..128231515,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-166bp_to_ENST00000500112,uc003ysa.1_5end | |association_with_transcript=-166bp_to_ENST00000500112,uc003ysa.1_5end | ||
|cluster_id=chr8:128231499..128231515,- | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_5_at_ENST00000500112_5end,CAGE_peak_5_at_uc003ysa.1_5end | |description=CAGE_peak_5_at_ENST00000500112_5end,CAGE_peak_5_at_uc003ysa.1_5end | ||
|id=chr8:128231499..128231515,- | |id=chr8:128231499..128231515,- | ||
|ontology_enrichment_celltype=CL:0000066!1.48e-23!254;CL:0000223!9.65e-19!59;CL:0002076!8.16e-17!43;CL:0002368!9.25e-12!13;CL:0002202!2.74e-10!9;CL:0002632!2.74e-10!9;CL:0002150!1.47e-09!3;CL:0000861!1.47e-09!3;CL:0000068!7.74e-09!3;CL:0000069!7.74e-09!3;CL:0000307!7.74e-09!3;CL:0000377!7.74e-09!3;CL:0002328!1.12e-08!3;CL:0000083!9.64e-07!4 | |ontology_enrichment_celltype=CL:0000066!1.48e-23!254;CL:0000223!9.65e-19!59;CL:0002076!8.16e-17!43;CL:0002368!9.25e-12!13;CL:0002202!2.74e-10!9;CL:0002632!2.74e-10!9;CL:0002150!1.47e-09!3;CL:0000861!1.47e-09!3;CL:0000068!7.74e-09!3;CL:0000069!7.74e-09!3;CL:0000307!7.74e-09!3;CL:0000377!7.74e-09!3;CL:0002328!1.12e-08!3;CL:0000083!9.64e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000307;2.03e-08;3!CL:0002336;8.67e-07;1!CL:0002261;8.67e-07;1!CL:1001319;8.67e-07;1!CL:1000600;8.67e-07;1!CL:0002170;8.67e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.79e-17,253;CL:0000068,2.19e-08,3;CL:0000069,2.19e-08,3;CL:0000307,2.19e-08,3;CL:0000377,2.19e-08,3;CL:1001319,8.67e-07,1;CL:1000600,8.67e-07,1;CL:0002336,9.73e-07,1;CL:0002261,9.73e-07,1;CL:0002170,9.73e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.68e-15;29!CL:0000377;2.03e-08;3 | |||
|ontology_enrichment_disease=DOID:305!9.99e-31!106;DOID:0050687!3.23e-21!143;DOID:162!2.08e-12!235;DOID:299!2.96e-12!25;DOID:14566!6.51e-12!239;DOID:1749!7.09e-09!14;DOID:1793!9.64e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:4074;2.42e-12;2!DOID:4905;2.42e-12;2!DOID:3498;2.42e-12;2!DOID:4468;3.42e-12;2!DOID:305;1.96e-10;106!DOID:1749;3.92e-10;14!DOID:0050687;7.78e-07;143!DOID:3111;8.67e-07;1!DOID:3603;8.67e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.45e-34,106;DOID:0050687,3.30e-24,143;DOID:162,2.31e-16,235;DOID:14566,6.70e-16,239;DOID:4074,2.29e-12,2;DOID:4905,2.29e-12,2;DOID:3498,2.29e-12,2;DOID:4468,4.30e-12,2;DOID:1749,3.88e-10,14;DOID:3111,7.73e-07,1;DOID:3603,7.73e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!6.11e-26!9;UBERON:0001041!9.35e-21!98;UBERON:0004921!1.23e-20!129;UBERON:0004185!1.23e-20!129;UBERON:0000077!1.29e-20!130;UBERON:0004119!1.39e-19!169;UBERON:0000925!1.39e-19!169;UBERON:0006595!1.39e-19!169;UBERON:0001557!1.97e-19!19;UBERON:0000065!4.13e-19!53;UBERON:0001007!7.89e-19!155;UBERON:0001555!7.89e-19!155;UBERON:0007026!7.89e-19!155;UBERON:0008947!5.58e-17!38;UBERON:0003258!5.58e-17!38;UBERON:0000072!6.32e-17!46;UBERON:0000344!5.50e-16!12;UBERON:0001004!7.42e-14!72;UBERON:0000063!6.58e-10!97;UBERON:0000485!1.01e-09!9;UBERON:0004815!1.12e-08!3;UBERON:0002031!1.12e-08!3;UBERON:0003104!1.29e-08!238;UBERON:0009142!1.29e-08!238;UBERON:0001048!1.40e-08!168;UBERON:0007196!2.77e-08!14;UBERON:0001558!2.77e-08!14;UBERON:0003350!2.79e-08!5;UBERON:0000466!6.75e-07!126 | |ontology_enrichment_uberon=UBERON:0001737!6.11e-26!9;UBERON:0001041!9.35e-21!98;UBERON:0004921!1.23e-20!129;UBERON:0004185!1.23e-20!129;UBERON:0000077!1.29e-20!130;UBERON:0004119!1.39e-19!169;UBERON:0000925!1.39e-19!169;UBERON:0006595!1.39e-19!169;UBERON:0001557!1.97e-19!19;UBERON:0000065!4.13e-19!53;UBERON:0001007!7.89e-19!155;UBERON:0001555!7.89e-19!155;UBERON:0007026!7.89e-19!155;UBERON:0008947!5.58e-17!38;UBERON:0003258!5.58e-17!38;UBERON:0000072!6.32e-17!46;UBERON:0000344!5.50e-16!12;UBERON:0001004!7.42e-14!72;UBERON:0000063!6.58e-10!97;UBERON:0000485!1.01e-09!9;UBERON:0004815!1.12e-08!3;UBERON:0002031!1.12e-08!3;UBERON:0003104!1.29e-08!238;UBERON:0009142!1.29e-08!238;UBERON:0001048!1.40e-08!168;UBERON:0007196!2.77e-08!14;UBERON:0001558!2.77e-08!14;UBERON:0003350!2.79e-08!5;UBERON:0000466!6.75e-07!126 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.29e-53;9!UBERON:0001557;2.29e-53;9!UBERON:0000072;7.88e-20;37!UBERON:0000065;2.32e-15;44!UBERON:0001004;1.05e-07;65!UBERON:0004913;5.78e-07;1!UBERON:0003703;5.78e-07;1!UBERON:0001174;5.78e-07;1!UBERON:0004914;5.78e-07;1!UBERON:0004645;8.67e-07;1!UBERON:0001256;8.67e-07;1!UBERON:0001259;8.67e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.29e-53,9;UBERON:0001557,4.10e-30,19;UBERON:0008947,3.45e-20,38;UBERON:0003258,3.45e-20,38;UBERON:0000072,1.04e-18,47;UBERON:0000065,6.15e-16,54;UBERON:0001041,4.11e-12,87;UBERON:0001004,6.50e-11,74;UBERON:0004921,1.28e-10,118;UBERON:0001007,4.03e-09,145;UBERON:0001555,4.03e-09,145;UBERON:0007026,4.03e-09,145;UBERON:0004119,6.32e-08,160;UBERON:0000925,6.32e-08,160;UBERON:0006595,6.32e-08,160;UBERON:0004913,5.78e-07,1;UBERON:0003703,5.78e-07,1;UBERON:0001174,5.78e-07,1;UBERON:0004914,5.78e-07,1;UBERON:0004645,8.67e-07,1;UBERON:0001256,8.67e-07,1;UBERON:0001259,8.67e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.0787107813136792,0,0,0,2.75826367343678,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82147644146271,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.4634580173321,40.4603256187444,38.0797427215902,58.786687466366,43.1401299302964,41.759628963553,31.8201887257988,34.3387563969356,32.3187611834968,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,1.11106134190236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.765676274967505,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.75266239629497,0.670302275535787,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94048259177238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,6.3337622438398,0,0,0,0,0,0,9.07670346588001,0.358042349351218,0,0,0,0,0,0,0,0,0,0,2.61724931056649,0,0,0,0,0,0,0,0,0,0,0,3.05027697853172,2.09135616417905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,3.4278889713421,0.282706142867882,0.432777279484182,0,0,0,0,0,0,0,0,0,0,1.56531695145672,10.439556319966,0,0,0,0,0,0.103688191397247,0,0,0,0,1.70765727617876,0,0,0,0,0,0,12.7718357301592,18.9301331253221,11.4140485303961,0.484945082442097,0,0,0,0,0,0,0,0,0,0,0,0,1.29649318189335,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69049698686902,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.733714394086716,7.27811696747131,0,0,0,0,0,0,0,0.163771917510097,2.66140955190681,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,5.88571542958957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.392600934460972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942706188406504,0,0,0,0,0,0,0.0999411559249289,0.892769693028288,12.3513205100492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.435433495793923,0,0.134704106029175,0.0717222053926763,0,1.38385556638657,0,0,0.538951212639521,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.0787107813136792,0,0,0,2.75826367343678,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82147644146271,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.4634580173321,40.4603256187444,38.0797427215902,58.786687466366,43.1401299302964,41.759628963553,31.8201887257988,34.3387563969356,32.3187611834968,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,1.11106134190236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.765676274967505,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.75266239629497,0.670302275535787,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94048259177238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,6.3337622438398,0,0,0,0,0,0,9.07670346588001,0.358042349351218,0,0,0,0,0,0,0,0,0,0,2.61724931056649,0,0,0,0,0,0,0,0,0,0,0,3.05027697853172,2.09135616417905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,3.4278889713421,0.282706142867882,0.432777279484182,0,0,0,0,0,0,0,0,0,0,1.56531695145672,10.439556319966,0,0,0,0,0,0.103688191397247,0,0,0,0,1.70765727617876,0,0,0,0,0,0,12.7718357301592,18.9301331253221,11.4140485303961,0.484945082442097,0,0,0,0,0,0,0,0,0,0,0,0,1.29649318189335,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69049698686902,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.733714394086716,7.27811696747131,0,0,0,0,0,0,0,0.163771917510097,2.66140955190681,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,5.88571542958957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.392600934460972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942706188406504,0,0,0,0,0,0,0.0999411559249289,0.892769693028288,12.3513205100492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.435433495793923,0,0.134704106029175,0.0717222053926763,0,1.38385556638657,0,0,0.538951212639521,0,0,0,0,0,0 | ||
|short_description=p5@ENST00000500112,p5@uc003ysa.1 | |short_description=p5@ENST00000500112,p5@uc003ysa.1 | ||
}} | }} |
Latest revision as of 14:51, 31 July 2015
Short description: | p5@ENST00000500112, p5@uc003ysa.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ENST00000500112_5end, CAGE_peak_5_at_uc003ysa.1_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | -166bp_to_ENST00000500112, uc003ysa.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.79e-17 | 253 |
duct epithelial cell | 2.19e-08 | 3 |
branched duct epithelial cell | 2.19e-08 | 3 |
tracheal epithelial cell | 2.19e-08 | 3 |
tracheoblast | 2.19e-08 | 3 |
bladder cell | 8.67e-07 | 1 |
lower urinary tract cell | 8.67e-07 | 1 |
buccal mucosa cell | 9.73e-07 | 1 |
endothelial cell of viscerocranial mucosa | 9.73e-07 | 1 |
keratinized cell of the oral mucosa | 9.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.29e-53 | 9 |
upper respiratory tract | 4.10e-30 | 19 |
respiratory primordium | 3.45e-20 | 38 |
endoderm of foregut | 3.45e-20 | 38 |
segment of respiratory tract | 1.04e-18 | 47 |
respiratory tract | 6.15e-16 | 54 |
foregut | 4.11e-12 | 87 |
respiratory system | 6.50e-11 | 74 |
subdivision of digestive tract | 1.28e-10 | 118 |
digestive system | 4.03e-09 | 145 |
digestive tract | 4.03e-09 | 145 |
primitive gut | 4.03e-09 | 145 |
endoderm-derived structure | 6.32e-08 | 160 |
endoderm | 6.32e-08 | 160 |
presumptive endoderm | 6.32e-08 | 160 |
hepatopancreatic ampulla | 5.78e-07 | 1 |
extrahepatic bile duct | 5.78e-07 | 1 |
common bile duct | 5.78e-07 | 1 |
duodenal papilla | 5.78e-07 | 1 |
urinary bladder urothelium | 8.67e-07 | 1 |
wall of urinary bladder | 8.67e-07 | 1 |
mucosa of urinary bladder | 8.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.45e-34 | 106 |
cell type cancer | 3.30e-24 | 143 |
cancer | 2.31e-16 | 235 |
disease of cellular proliferation | 6.70e-16 | 239 |
pancreas adenocarcinoma | 2.29e-12 | 2 |
pancreatic carcinoma | 2.29e-12 | 2 |
pancreatic ductal adenocarcinoma | 2.29e-12 | 2 |
clear cell adenocarcinoma | 4.30e-12 | 2 |
squamous cell carcinoma | 3.88e-10 | 14 |
cystadenocarcinoma | 7.73e-07 | 1 |
mucinous cystadenocarcinoma | 7.73e-07 | 1 |