FFCP PHASE1:Hg19::chr3:69811899..69811913,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4286 | |EntrezGene=4286 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7105 | |HGNC=7105 | ||
|TSSclassifier=strong | |||
|UniProt=C9J845 | |UniProt=C9J845 | ||
|association_with_transcript=24bp_to_ENST00000433517_5end | |association_with_transcript=24bp_to_ENST00000433517_5end | ||
|cluster_id=chr3:69811899..69811913,+ | |||
|description=CAGE_peak_11_at_MITF_5end | |description=CAGE_peak_11_at_MITF_5end | ||
|id=chr3:69811899..69811913,+ | |id=chr3:69811899..69811913,+ | ||
|ontology_enrichment_celltype=CL:1000497!1.47e-08!18;CL:0002518!1.47e-08!18;CL:1000449!1.01e-07!16;CL:0002681!1.57e-07!13;CL:0002584!1.57e-07!13;CL:0002622!6.10e-07!3 | |ontology_enrichment_celltype=CL:1000497!1.47e-08!18;CL:0002518!1.47e-08!18;CL:1000449!1.01e-07!16;CL:0002681!1.57e-07!13;CL:0002584!1.57e-07!13;CL:0002622!6.10e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:1000497;4.11e-23;17!CL:0002518;4.11e-23;17!CL:1000449;2.34e-18;15!CL:0002681;4.92e-15;12!CL:0002584;4.92e-15;12!CL:1000507;1.33e-10;10!CL:1000494;1.33e-10;10!CL:0002188;9.69e-10;5!CL:1000746;3.35e-07;7!CL:1000612;3.35e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,3.08e-23,17;CL:0002518,3.08e-23,17;CL:1000449,1.82e-18,15;CL:0002681,4.58e-15,12;CL:0002584,4.58e-15,12;CL:1000507,1.28e-10,10;CL:1000494,1.28e-10,10;CL:0002188,7.44e-10,5;CL:1000746,2.77e-07,7;CL:1000612,2.77e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060084!1.81e-07!3;DOID:127!1.81e-07!3 | |ontology_enrichment_disease=DOID:0060084!1.81e-07!3;DOID:127!1.81e-07!3 | ||
|ontology_enrichment_disease_v019=DOID:0060084;2.72e-16;3!DOID:127;2.72e-16;3!DOID:0060072;1.86e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.73e-16,3;DOID:127,2.73e-16,3;DOID:0060072,1.86e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0003064!2.16e-12!37;UBERON:0006554!2.36e-12!44;UBERON:0001008!5.83e-12!45;UBERON:0002367!7.45e-11!11;UBERON:0010147!7.45e-11!11;UBERON:0009846!7.45e-11!11;UBERON:0003353!7.45e-11!11;UBERON:0004902!7.45e-11!11;UBERON:0003820!7.45e-11!11;UBERON:0009847!7.45e-11!11;UBERON:0003937!8.17e-10!12;UBERON:0005399!8.17e-10!12;UBERON:0000162!3.49e-08!14;UBERON:0001353!3.49e-08!14;UBERON:0000163!3.49e-08!14;UBERON:0006866!3.49e-08!14;UBERON:0000164!3.49e-08!14;UBERON:0000931!3.49e-08!14;UBERON:0004211!1.01e-07!16;UBERON:0001285!1.01e-07!16;UBERON:0007684!1.01e-07!16;UBERON:0003220!1.01e-07!16;UBERON:0004208!1.01e-07!16;UBERON:0001851!1.33e-07!16;UBERON:0004122!1.56e-07!15;UBERON:0001225!1.57e-07!13;UBERON:0008987!1.57e-07!13;UBERON:0006555!3.60e-07!17;UBERON:0005103!3.60e-07!17;UBERON:0000083!3.60e-07!17;UBERON:0009201!3.60e-07!17;UBERON:0004819!3.60e-07!17;UBERON:0006553!3.60e-07!17;UBERON:0003074!3.60e-07!17;UBERON:0003060!3.60e-07!17;UBERON:0005153!4.44e-07!37;UBERON:0001046!5.55e-07!19 | |ontology_enrichment_uberon=UBERON:0003064!2.16e-12!37;UBERON:0006554!2.36e-12!44;UBERON:0001008!5.83e-12!45;UBERON:0002367!7.45e-11!11;UBERON:0010147!7.45e-11!11;UBERON:0009846!7.45e-11!11;UBERON:0003353!7.45e-11!11;UBERON:0004902!7.45e-11!11;UBERON:0003820!7.45e-11!11;UBERON:0009847!7.45e-11!11;UBERON:0003937!8.17e-10!12;UBERON:0005399!8.17e-10!12;UBERON:0000162!3.49e-08!14;UBERON:0001353!3.49e-08!14;UBERON:0000163!3.49e-08!14;UBERON:0006866!3.49e-08!14;UBERON:0000164!3.49e-08!14;UBERON:0000931!3.49e-08!14;UBERON:0004211!1.01e-07!16;UBERON:0001285!1.01e-07!16;UBERON:0007684!1.01e-07!16;UBERON:0003220!1.01e-07!16;UBERON:0004208!1.01e-07!16;UBERON:0001851!1.33e-07!16;UBERON:0004122!1.56e-07!15;UBERON:0001225!1.57e-07!13;UBERON:0008987!1.57e-07!13;UBERON:0006555!3.60e-07!17;UBERON:0005103!3.60e-07!17;UBERON:0000083!3.60e-07!17;UBERON:0009201!3.60e-07!17;UBERON:0004819!3.60e-07!17;UBERON:0006553!3.60e-07!17;UBERON:0003074!3.60e-07!17;UBERON:0003060!3.60e-07!17;UBERON:0005153!4.44e-07!37;UBERON:0001046!5.55e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.34e-18;15!UBERON:0004819;2.34e-18;15!UBERON:0001285;2.34e-18;15!UBERON:0007684;2.34e-18;15!UBERON:0002113;2.75e-16;24!UBERON:0011143;2.75e-16;24!UBERON:0001225;4.92e-15;12!UBERON:0008987;4.92e-15;12!UBERON:0000489;2.02e-13;29!UBERON:0006554;5.81e-13;30!UBERON:0001008;5.81e-13;30!UBERON:0001851;4.44e-12;15!UBERON:0000353;4.44e-12;15!UBERON:0004211;1.33e-10;10!UBERON:0009773;1.33e-10;10!UBERON:0001231;1.33e-10;10!UBERON:0004810;1.33e-10;10!UBERON:0000074;3.35e-07;7!UBERON:0001229;3.35e-07;7!UBERON:0002417;8.49e-07;58!UBERON:0000916;8.49e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.82e-18,15;UBERON:0009773,1.82e-18,15;UBERON:0001231,1.82e-18,15;UBERON:0001285,1.82e-18,15;UBERON:0007684,1.82e-18,15;UBERON:0004208,1.82e-18,15;UBERON:0006555,2.59e-17,16;UBERON:0004819,2.59e-17,16;UBERON:0002113,4.33e-15,26;UBERON:0003918,4.33e-15,26;UBERON:0011143,4.33e-15,26;UBERON:0005095,4.33e-15,26;UBERON:0007687,4.33e-15,26;UBERON:0001225,4.58e-15,12;UBERON:0008987,4.58e-15,12;UBERON:0000489,1.34e-12,31;UBERON:0001851,4.20e-12,15;UBERON:0000353,4.20e-12,15;UBERON:0004810,1.28e-10,10;UBERON:0005172,1.97e-09,54;UBERON:0005173,1.97e-09,54;UBERON:0002417,2.01e-08,60;UBERON:0000916,2.01e-08,60;UBERON:0006554,3.54e-08,47;UBERON:0001008,5.35e-08,48;UBERON:0010532,2.77e-07,7;UBERON:0000074,2.77e-07,7;UBERON:0001229,2.77e-07,7;UBERON:0001230,2.77e-07,7;UBERON:0003220,2.77e-07,7;UBERON:0005749,2.77e-07,7;UBERON:0004199,2.77e-07,7;UBERON:0004209,2.77e-07,7;UBERON:0004198,2.77e-07,7 | |||
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| ||
|short_description=p11@MITF | |short_description=p11@MITF | ||
}} | }} |
Latest revision as of 12:09, 19 September 2015
Short description: | p11@MITF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_MITF_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000433517_5end |
EntrezGene: | MITF |
HGNC: | 7105 |
UniProt: | C9J845 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 3.08e-23 | 17 |
kidney epithelial cell | 3.08e-23 | 17 |
epithelial cell of nephron | 1.82e-18 | 15 |
kidney cortical cell | 4.58e-15 | 12 |
renal cortical epithelial cell | 4.58e-15 | 12 |
kidney tubule cell | 1.28e-10 | 10 |
nephron tubule epithelial cell | 1.28e-10 | 10 |
glomerular endothelial cell | 7.44e-10 | 5 |
glomerular cell | 2.77e-07 | 7 |
kidney corpuscule cell | 2.77e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.82e-18 | 15 |
renal tubule | 1.82e-18 | 15 |
nephron tubule | 1.82e-18 | 15 |
nephron | 1.82e-18 | 15 |
uriniferous tubule | 1.82e-18 | 15 |
nephrogenic mesenchyme | 1.82e-18 | 15 |
excretory tube | 2.59e-17 | 16 |
kidney epithelium | 2.59e-17 | 16 |
kidney | 4.33e-15 | 26 |
kidney mesenchyme | 4.33e-15 | 26 |
upper urinary tract | 4.33e-15 | 26 |
kidney rudiment | 4.33e-15 | 26 |
kidney field | 4.33e-15 | 26 |
cortex of kidney | 4.58e-15 | 12 |
renal parenchyma | 4.58e-15 | 12 |
cavitated compound organ | 1.34e-12 | 31 |
cortex | 4.20e-12 | 15 |
parenchyma | 4.20e-12 | 15 |
nephron tubule epithelium | 1.28e-10 | 10 |
abdomen element | 1.97e-09 | 54 |
abdominal segment element | 1.97e-09 | 54 |
abdominal segment of trunk | 2.01e-08 | 60 |
abdomen | 2.01e-08 | 60 |
urinary system structure | 3.54e-08 | 47 |
renal system | 5.35e-08 | 48 |
primitive nephron | 2.77e-07 | 7 |
renal glomerulus | 2.77e-07 | 7 |
renal corpuscle | 2.77e-07 | 7 |
glomerular capsule | 2.77e-07 | 7 |
metanephric mesenchyme | 2.77e-07 | 7 |
glomerular tuft | 2.77e-07 | 7 |
S-shaped body | 2.77e-07 | 7 |
renal vesicle | 2.77e-07 | 7 |
comma-shaped body | 2.77e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.73e-16 | 3 |
leiomyoma | 2.73e-16 | 3 |
benign neoplasm | 1.86e-12 | 4 |