FFCP PHASE1:Hg19::chr4:186444590..186444603,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:186444590..186444603,- | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_at_chr4:186444590..186444603,- | |description=CAGE_peak_at_chr4:186444590..186444603,- | ||
|id=chr4:186444590..186444603,- | |id=chr4:186444590..186444603,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002548;1.53e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002548,1.72e-10,6 | |||
|ontology_enrichment_development_v019=UBERON:0005062;3.19e-09;4!UBERON:0007284;3.19e-09;4!UBERON:0006965;3.33e-09;2!UBERON:0007297;1.12e-08;2!UBERON:0003104;2.50e-08;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;6.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.25e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.04e-18!115;UBERON:0007100!9.88e-15!27;UBERON:0000948!5.43e-12!24;UBERON:0005498!5.43e-12!24;UBERON:0004140!5.43e-12!24;UBERON:0009881!5.43e-12!24;UBERON:0004141!5.43e-12!24;UBERON:0003084!5.43e-12!24;UBERON:0007005!5.43e-12!24;UBERON:0004139!5.43e-12!24;UBERON:0004291!5.43e-12!24;UBERON:0003103!3.77e-10!69;UBERON:0004111!1.15e-08!241;UBERON:0000481!2.58e-08!347;UBERON:0000477!6.10e-08!286;UBERON:0002385!1.63e-07!63;UBERON:0001015!1.63e-07!63;UBERON:0000383!1.63e-07!63;UBERON:0000483!2.45e-07!309;UBERON:0000119!4.66e-07!312 | |ontology_enrichment_uberon=UBERON:0007023!8.04e-18!115;UBERON:0007100!9.88e-15!27;UBERON:0000948!5.43e-12!24;UBERON:0005498!5.43e-12!24;UBERON:0004140!5.43e-12!24;UBERON:0009881!5.43e-12!24;UBERON:0004141!5.43e-12!24;UBERON:0003084!5.43e-12!24;UBERON:0007005!5.43e-12!24;UBERON:0004139!5.43e-12!24;UBERON:0004291!5.43e-12!24;UBERON:0003103!3.77e-10!69;UBERON:0004111!1.15e-08!241;UBERON:0000481!2.58e-08!347;UBERON:0000477!6.10e-08!286;UBERON:0002385!1.63e-07!63;UBERON:0001015!1.63e-07!63;UBERON:0000383!1.63e-07!63;UBERON:0000483!2.45e-07!309;UBERON:0000119!4.66e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;5.32e-20;25!UBERON:0000948;7.02e-16;22!UBERON:0004151;1.65e-12;3!UBERON:0003978;3.82e-12;3!UBERON:0000946;3.82e-12;3!UBERON:0005090;1.19e-09;2!UBERON:0001630;1.19e-09;2!UBERON:0000341;1.56e-09;2!UBERON:0002133;8.67e-09;2!UBERON:0002081;1.12e-08;2!UBERON:0005406;1.12e-08;2!UBERON:0001134;1.30e-08;16!UBERON:0002036;1.30e-08;16!UBERON:0003103;5.89e-07;61!UBERON:0001723;9.42e-07;3!UBERON:0001033;9.42e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.21e-18,27;UBERON:0003103,3.09e-18,68;UBERON:0000948,2.27e-14,24;UBERON:0005498,2.27e-14,24;UBERON:0004140,2.27e-14,24;UBERON:0009881,2.27e-14,24;UBERON:0004141,2.27e-14,24;UBERON:0003084,2.27e-14,24;UBERON:0007005,2.27e-14,24;UBERON:0004139,2.27e-14,24;UBERON:0004291,2.27e-14,24;UBERON:0004151,1.47e-12,3;UBERON:0003978,3.62e-12,3;UBERON:0009751,3.62e-12,3;UBERON:0000946,3.62e-12,3;UBERON:0002523,3.62e-12,3;UBERON:0005983,3.62e-12,3;UBERON:0002165,3.62e-12,3;UBERON:0002062,3.62e-12,3;UBERON:0007280,3.62e-12,3;UBERON:0007023,1.98e-10,114;UBERON:0005090,1.20e-09,2;UBERON:0001630,1.20e-09,2;UBERON:0000341,1.54e-09,2;UBERON:0005406,7.13e-09,2;UBERON:0002133,8.35e-09,2;UBERON:0002081,9.77e-09,2;UBERON:0010227,9.77e-09,2;UBERON:0001723,9.43e-07,3;UBERON:0001033,9.43e-07,3;UBERON:0010056,9.43e-07,3 | |||
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| ||
|short_description=p@chr4:186444590..186444603,- | |short_description=p@chr4:186444590..186444603,- | ||
}} | }} |
Latest revision as of 04:03, 30 July 2015
Short description: | p@chr4:186444590..186444603, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:186444590..186444603, - |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac fibroblast | 1.72e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.21e-18 | 27 |
compound organ | 3.09e-18 | 68 |
heart | 2.27e-14 | 24 |
primitive heart tube | 2.27e-14 | 24 |
primary heart field | 2.27e-14 | 24 |
anterior lateral plate mesoderm | 2.27e-14 | 24 |
heart tube | 2.27e-14 | 24 |
heart primordium | 2.27e-14 | 24 |
cardiac mesoderm | 2.27e-14 | 24 |
cardiogenic plate | 2.27e-14 | 24 |
heart rudiment | 2.27e-14 | 24 |
cardiac chamber | 1.47e-12 | 3 |
valve | 3.62e-12 | 3 |
cardiac mesenchyme | 3.62e-12 | 3 |
cardial valve | 3.62e-12 | 3 |
tunica intima | 3.62e-12 | 3 |
heart layer | 3.62e-12 | 3 |
endocardium | 3.62e-12 | 3 |
endocardial cushion | 3.62e-12 | 3 |
presumptive endocardium | 3.62e-12 | 3 |
adult organism | 1.98e-10 | 114 |
muscle structure | 1.20e-09 | 2 |
muscle organ | 1.20e-09 | 2 |
throat | 1.54e-09 | 2 |
perirenal fat | 7.13e-09 | 2 |
atrioventricular valve | 8.35e-09 | 2 |
cardiac atrium | 9.77e-09 | 2 |
future cardiac atrium | 9.77e-09 | 2 |
tongue | 9.43e-07 | 3 |
gustatory system | 9.43e-07 | 3 |
future tongue | 9.43e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.25e-09 | 2 |