FFCP PHASE1:Hg19::chr4:186583393..186583400,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8470 | |EntrezGene=8470 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=24098 | |HGNC=24098 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-40bp_to_AB384525,AM392558,AM392889,AM392985,AM393034,AM393056,AM393172,AM393267,AM393367,AM393650,AM393706,AM393834_5end | |association_with_transcript=-40bp_to_AB384525,AM392558,AM392889,AM392985,AM393034,AM393056,AM393172,AM393267,AM393367,AM393650,AM393706,AM393834_5end | ||
|cluster_id=chr4:186583393..186583400,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_66_at_SORBS2_5end | |description=CAGE_peak_66_at_SORBS2_5end | ||
|id=chr4:186583393..186583400,- | |id=chr4:186583393..186583400,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;5.05e-34;1!UBERON:0004140;9.85e-34;1!UBERON:0005062;1.44e-09;4!UBERON:0007284;1.44e-09;4 | |||
|ontology_enrichment_disease=DOID:114!9.14e-13!2;DOID:178!3.52e-07!1;DOID:326!3.52e-07!1;DOID:3978!3.52e-07!1;DOID:3394!3.52e-07!1;DOID:5844!3.52e-07!1;DOID:1287!8.77e-07!4 | |ontology_enrichment_disease=DOID:114!9.14e-13!2;DOID:178!3.52e-07!1;DOID:326!3.52e-07!1;DOID:3978!3.52e-07!1;DOID:3394!3.52e-07!1;DOID:5844!3.52e-07!1;DOID:1287!8.77e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:114;1.45e-66;2!DOID:178;5.05e-34;1!DOID:326;5.05e-34;1!DOID:3978;5.05e-34;1!DOID:3394;5.05e-34;1!DOID:5844;5.05e-34;1!DOID:1287;5.98e-34;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.45e-66,2;DOID:178,5.05e-34,1;DOID:326,5.05e-34,1;DOID:3978,5.05e-34,1;DOID:3394,5.05e-34,1;DOID:5844,5.05e-34,1;DOID:1287,5.98e-34,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.61e-18!115;UBERON:0003978!5.85e-18!3;UBERON:0009751!5.85e-18!3;UBERON:0000946!5.85e-18!3;UBERON:0002523!5.85e-18!3;UBERON:0005983!5.85e-18!3;UBERON:0002165!5.85e-18!3;UBERON:0002062!5.85e-18!3;UBERON:0007280!5.85e-18!3;UBERON:0003103!5.23e-13!69;UBERON:0002133!1.44e-12!2;UBERON:0007100!1.51e-12!27;UBERON:0003127!7.28e-12!2;UBERON:0001872!2.90e-10!5;UBERON:0004151!9.70e-09!3;UBERON:0001893!2.00e-08!34;UBERON:0003075!8.55e-08!86;UBERON:0007284!8.55e-08!86;UBERON:0003126!1.84e-07!7;UBERON:0001005!1.84e-07!7;UBERON:0002346!2.42e-07!90;UBERON:0002084!3.32e-07!1;UBERON:0002082!3.32e-07!1;UBERON:0004706!3.32e-07!1;UBERON:0002134!3.73e-07!1;UBERON:0005208!3.73e-07!1;UBERON:0005946!3.73e-07!1;UBERON:0005965!3.73e-07!1;UBERON:0002078!3.73e-07!1;UBERON:0002146!4.18e-07!1;UBERON:0005623!4.18e-07!1;UBERON:0002135!4.43e-07!1;UBERON:0001869!5.73e-07!32;UBERON:0002780!7.82e-07!41;UBERON:0001890!7.82e-07!41;UBERON:0006240!7.82e-07!41;UBERON:0000956!8.59e-07!25;UBERON:0000203!8.59e-07!25;UBERON:0002791!9.82e-07!33 | |ontology_enrichment_uberon=UBERON:0007023!3.61e-18!115;UBERON:0003978!5.85e-18!3;UBERON:0009751!5.85e-18!3;UBERON:0000946!5.85e-18!3;UBERON:0002523!5.85e-18!3;UBERON:0005983!5.85e-18!3;UBERON:0002165!5.85e-18!3;UBERON:0002062!5.85e-18!3;UBERON:0007280!5.85e-18!3;UBERON:0003103!5.23e-13!69;UBERON:0002133!1.44e-12!2;UBERON:0007100!1.51e-12!27;UBERON:0003127!7.28e-12!2;UBERON:0001872!2.90e-10!5;UBERON:0004151!9.70e-09!3;UBERON:0001893!2.00e-08!34;UBERON:0003075!8.55e-08!86;UBERON:0007284!8.55e-08!86;UBERON:0003126!1.84e-07!7;UBERON:0001005!1.84e-07!7;UBERON:0002346!2.42e-07!90;UBERON:0002084!3.32e-07!1;UBERON:0002082!3.32e-07!1;UBERON:0004706!3.32e-07!1;UBERON:0002134!3.73e-07!1;UBERON:0005208!3.73e-07!1;UBERON:0005946!3.73e-07!1;UBERON:0005965!3.73e-07!1;UBERON:0002078!3.73e-07!1;UBERON:0002146!4.18e-07!1;UBERON:0005623!4.18e-07!1;UBERON:0002135!4.43e-07!1;UBERON:0001869!5.73e-07!32;UBERON:0002780!7.82e-07!41;UBERON:0001890!7.82e-07!41;UBERON:0006240!7.82e-07!41;UBERON:0000956!8.59e-07!25;UBERON:0000203!8.59e-07!25;UBERON:0002791!9.82e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.50e-47;25!UBERON:0004151;1.53e-44;3!UBERON:0002084;5.05e-34;1!UBERON:0002134;5.05e-34;1!UBERON:0002082;5.05e-34;1!UBERON:0005208;5.05e-34;1!UBERON:0004145;5.05e-34;1!UBERON:0005946;5.05e-34;1!UBERON:0005965;5.05e-34;1!UBERON:0002078;5.05e-34;1!UBERON:0002081;9.07e-18;2!UBERON:0002133;9.07e-18;2!UBERON:0000948;3.42e-14;22!UBERON:0003978;2.59e-12;3!UBERON:0000946;2.59e-12;3!UBERON:0003103;1.04e-09;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.53e-44,3;UBERON:0007100,4.38e-44,27;UBERON:0002084,3.61e-34,1;UBERON:0002082,3.61e-34,1;UBERON:0010226,3.61e-34,1;UBERON:0002134,7.06e-34,1;UBERON:0005208,7.06e-34,1;UBERON:0005946,7.06e-34,1;UBERON:0005965,7.06e-34,1;UBERON:0002078,7.06e-34,1;UBERON:0003103,7.10e-18,68;UBERON:0002081,1.07e-17,2;UBERON:0002133,1.07e-17,2;UBERON:0010227,1.07e-17,2;UBERON:0000948,4.46e-13,24;UBERON:0005498,4.46e-13,24;UBERON:0004140,4.46e-13,24;UBERON:0009881,4.46e-13,24;UBERON:0004141,4.46e-13,24;UBERON:0003084,4.46e-13,24;UBERON:0007005,4.46e-13,24;UBERON:0004139,4.46e-13,24;UBERON:0004291,4.46e-13,24;UBERON:0003978,2.89e-12,3;UBERON:0009751,2.89e-12,3;UBERON:0000946,2.89e-12,3;UBERON:0002523,2.89e-12,3;UBERON:0005983,2.89e-12,3;UBERON:0004145,2.89e-12,3;UBERON:0002165,2.89e-12,3;UBERON:0002062,2.89e-12,3;UBERON:0007280,2.89e-12,3;UBERON:0001009,4.95e-11,112;UBERON:0007023,1.08e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.916641696046735,2.15361907373044,2.1964690054889,6.00916467391199,4.68660060627932,1.74677028465488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,2.64836788146173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.0645889098360061,0,0,0,0.202117188958219,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.916641696046735,2.15361907373044,2.1964690054889,6.00916467391199,4.68660060627932,1.74677028465488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,2.64836788146173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.0645889098360061,0,0,0,0.202117188958219,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p66@SORBS2 | |short_description=p66@SORBS2 | ||
}} | }} |
Latest revision as of 03:44, 17 September 2015
Short description: | p66@SORBS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_66_at_SORBS2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -40bp_to_AB384525, AM392558, AM392889, AM392985, AM393034, AM393056, AM393172, AM393267, AM393367, AM393650, AM393706, AM393834_5end |
EntrezGene: | SORBS2 |
HGNC: | 24098 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 1.53e-44 | 3 |
primary circulatory organ | 4.38e-44 | 27 |
heart left ventricle | 3.61e-34 | 1 |
cardiac ventricle | 3.61e-34 | 1 |
future cardiac ventricle | 3.61e-34 | 1 |
tricuspid valve | 7.06e-34 | 1 |
right atrium valve | 7.06e-34 | 1 |
outflow tract of atrium | 7.06e-34 | 1 |
outflow part of right atrium | 7.06e-34 | 1 |
right cardiac atrium | 7.06e-34 | 1 |
compound organ | 7.10e-18 | 68 |
cardiac atrium | 1.07e-17 | 2 |
atrioventricular valve | 1.07e-17 | 2 |
future cardiac atrium | 1.07e-17 | 2 |
heart | 4.46e-13 | 24 |
primitive heart tube | 4.46e-13 | 24 |
primary heart field | 4.46e-13 | 24 |
anterior lateral plate mesoderm | 4.46e-13 | 24 |
heart tube | 4.46e-13 | 24 |
heart primordium | 4.46e-13 | 24 |
cardiac mesoderm | 4.46e-13 | 24 |
cardiogenic plate | 4.46e-13 | 24 |
heart rudiment | 4.46e-13 | 24 |
valve | 2.89e-12 | 3 |
cardiac mesenchyme | 2.89e-12 | 3 |
cardial valve | 2.89e-12 | 3 |
tunica intima | 2.89e-12 | 3 |
heart layer | 2.89e-12 | 3 |
outflow tract | 2.89e-12 | 3 |
endocardium | 2.89e-12 | 3 |
endocardial cushion | 2.89e-12 | 3 |
presumptive endocardium | 2.89e-12 | 3 |
circulatory system | 4.95e-11 | 112 |
adult organism | 1.08e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.45e-66 | 2 |
vascular disease | 5.05e-34 | 1 |
ischemia | 5.05e-34 | 1 |
extrinsic cardiomyopathy | 5.05e-34 | 1 |
myocardial ischemia | 5.05e-34 | 1 |
myocardial infarction | 5.05e-34 | 1 |
cardiovascular system disease | 5.98e-34 | 4 |