FFCP PHASE1:Hg19::chr9:33817830..33817839,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54926 | |EntrezGene=54926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19907 | |HGNC=19907 | ||
|TSSclassifier=strong | |||
|UniProt=Q712K3 | |UniProt=Q712K3 | ||
|association_with_transcript=74bp_to_CR457233_5end | |association_with_transcript=74bp_to_CR457233_5end | ||
|cluster_id=chr9:33817830..33817839,+ | |||
|description=CAGE_peak_8_at_UBE2R2_5end | |description=CAGE_peak_8_at_UBE2R2_5end | ||
|id=chr9:33817830..33817839,+ | |id=chr9:33817830..33817839,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.76e-14!42;CL:0000860!2.17e-13!45;CL:0002194!2.87e-08!63;CL:0000576!2.87e-08!63;CL:0000040!2.87e-08!63;CL:0000559!2.87e-08!63;CL:0000766!5.85e-08!76;CL:0002009!1.35e-07!65 | |ontology_enrichment_celltype=CL:0002057!2.76e-14!42;CL:0000860!2.17e-13!45;CL:0002194!2.87e-08!63;CL:0000576!2.87e-08!63;CL:0000040!2.87e-08!63;CL:0000559!2.87e-08!63;CL:0000766!5.85e-08!76;CL:0002009!1.35e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.95e-22;33!CL:0002057;1.95e-22;33!CL:0000473;1.16e-16;39!CL:0000234;1.16e-16;39!CL:0000576;1.48e-12;48!CL:0000766;6.74e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.22e-24,42;CL:0002057,5.22e-24,42;CL:0000473,7.01e-22,48;CL:0000234,7.01e-22,48;CL:0000766,5.74e-15,72;CL:0002194,7.73e-15,59;CL:0000576,7.73e-15,59;CL:0000040,7.73e-15,59;CL:0000559,7.73e-15,59;CL:0002009,5.94e-14,61;CL:0000839,5.37e-12,66;CL:0000557,1.21e-11,67;CL:0000763,3.06e-07,108;CL:0000049,3.06e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.84e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.20e-11,98;UBERON:0003061,1.20e-11,98;UBERON:0002371,1.32e-11,76;UBERON:0001434,9.97e-11,100;UBERON:0004765,1.50e-10,90;UBERON:0001474,7.21e-10,82;UBERON:0002193,9.76e-10,108;UBERON:0002405,8.41e-08,93;UBERON:0002204,8.69e-08,167;UBERON:0000926,3.04e-07,315;UBERON:0004120,3.04e-07,315;UBERON:0006603,3.04e-07,315;UBERON:0003081,6.99e-07,203 | |||
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| ||
|short_description=p8@UBE2R2 | |short_description=p8@UBE2R2 | ||
}} | }} |
Latest revision as of 04:39, 17 September 2015
Short description: | p8@UBE2R2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_UBE2R2_5end |
Coexpression cluster: | NA |
Association with transcript: | 74bp_to_CR457233_5end |
EntrezGene: | UBE2R2 |
HGNC: | 19907 |
UniProt: | Q712K3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.22e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.22e-24 | 42 |
defensive cell | 7.01e-22 | 48 |
phagocyte | 7.01e-22 | 48 |
myeloid leukocyte | 5.74e-15 | 72 |
monopoietic cell | 7.73e-15 | 59 |
monocyte | 7.73e-15 | 59 |
monoblast | 7.73e-15 | 59 |
promonocyte | 7.73e-15 | 59 |
macrophage dendritic cell progenitor | 5.94e-14 | 61 |
myeloid lineage restricted progenitor cell | 5.37e-12 | 66 |
granulocyte monocyte progenitor cell | 1.21e-11 | 67 |
myeloid cell | 3.06e-07 | 108 |
common myeloid progenitor | 3.06e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.20e-11 | 98 |
blood island | 1.20e-11 | 98 |
bone marrow | 1.32e-11 | 76 |
skeletal system | 9.97e-11 | 100 |
skeletal element | 1.50e-10 | 90 |
bone element | 7.21e-10 | 82 |
hemolymphoid system | 9.76e-10 | 108 |
immune system | 8.41e-08 | 93 |
musculoskeletal system | 8.69e-08 | 167 |
mesoderm | 3.04e-07 | 315 |
mesoderm-derived structure | 3.04e-07 | 315 |
presumptive mesoderm | 3.04e-07 | 315 |
lateral plate mesoderm | 6.99e-07 | 203 |