FFCP PHASE1:Hg19::chr9:94245754..94245770,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:94245754..94245770,- | |||
|description=CAGE_peak_at_chr9:94245754..94245770,- | |description=CAGE_peak_at_chr9:94245754..94245770,- | ||
|id=chr9:94245754..94245770,- | |id=chr9:94245754..94245770,- | ||
|ontology_enrichment_celltype=CL:0000057!2.39e-16!75;CL:0000135!4.38e-10!3;CL:0000386!4.38e-10!3;CL:0000388!4.38e-10!3;CL:0002580!1.66e-09!3;CL:0002620!1.99e-08!23;CL:0002334!2.73e-08!12;CL:0000055!8.29e-07!180 | |ontology_enrichment_celltype=CL:0000057!2.39e-16!75;CL:0000135!4.38e-10!3;CL:0000386!4.38e-10!3;CL:0000388!4.38e-10!3;CL:0002580!1.66e-09!3;CL:0002620!1.99e-08!23;CL:0002334!2.73e-08!12;CL:0000055!8.29e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002540;5.55e-15;6!CL:0000135;4.42e-14;3!CL:0000388;4.42e-14;3!CL:0000214;7.41e-14;3!CL:0000153;3.69e-10;9!CL:0000447;3.69e-10;9!CL:0002092;3.31e-09;10!CL:0000499;1.61e-08;28!CL:0002537;1.79e-08;5!CL:0002556;3.35e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,4.82e-15,6;CL:0000135,4.42e-14,3;CL:0000388,4.42e-14,3;CL:0000214,1.09e-13,3;CL:0000153,3.81e-10,9;CL:0000447,3.81e-10,9;CL:0002092,3.04e-09,10;CL:0000057,6.58e-09,76;CL:0000499,1.63e-08,28;CL:0002537,1.86e-08,5;CL:0002556,4.30e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;9.04e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,4.58e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000043!4.38e-10!3;UBERON:0002384!4.31e-07!375 | |ontology_enrichment_uberon=UBERON:0000043!4.38e-10!3;UBERON:0002384!4.31e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.42e-14;3!UBERON:0000043;4.42e-14;3!UBERON:0007845;4.42e-14;3!UBERON:0001434;5.54e-14;36!UBERON:0006915;7.41e-14;3!UBERON:0007616;7.41e-14;3!UBERON:0002217;7.41e-14;3!UBERON:0002018;7.41e-14;3!UBERON:0002371;5.79e-13;12!UBERON:0007195;9.04e-11;1!UBERON:0004457;3.69e-10;9!UBERON:0000042;3.69e-10;9!UBERON:0001474;1.05e-08;18!UBERON:0002204;7.40e-08;70!UBERON:0001758;3.35e-07;6!UBERON:0003672;3.35e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,4.42e-14,3;UBERON:0000043,4.42e-14,3;UBERON:0007845,4.42e-14,3;UBERON:0006915,1.09e-13,3;UBERON:0007616,1.09e-13,3;UBERON:0002217,1.09e-13,3;UBERON:0002018,1.09e-13,3;UBERON:0007195,1.33e-10,1;UBERON:0004457,1.08e-07,12;UBERON:0000042,1.08e-07,12;UBERON:0002384,2.57e-07,371;UBERON:0001758,4.30e-07,6;UBERON:0003672,4.30e-07,6 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,1.98613771219828,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989067717114227,0,0,0,0,0,1.31693286264251,0.919463387397059,1.05166641234618,0,0.179389635688862,0.213557388818567,0,0,0,0.515281080091258,0,0.506328996723799,0.0974370051611986,1.7670364197088,0,0.484938170456436,2.13005755509969,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,2.39624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,1.07423381301644,0.280660094433074,1.40953064181271,0,0.64341568457443,0,0,0,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,1.05553817648832,5.92730807327823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0.558564802544508,0,0,0,1.28767814440971,0,0.201550417460179,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919036730290385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32582103692562,1.76097531226803,8.89811221596536,0,0.756154618816195,0,0.443565449968902,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,2.31087814315709,3.46101249699031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,1.98613771219828,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989067717114227,0,0,0,0,0,1.31693286264251,0.919463387397059,1.05166641234618,0,0.179389635688862,0.213557388818567,0,0,0,0.515281080091258,0,0.506328996723799,0.0974370051611986,1.7670364197088,0,0.484938170456436,2.13005755509969,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,2.39624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,1.07423381301644,0.280660094433074,1.40953064181271,0,0.64341568457443,0,0,0,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,1.05553817648832,5.92730807327823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0.558564802544508,0,0,0,1.28767814440971,0,0.201550417460179,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919036730290385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32582103692562,1.76097531226803,8.89811221596536,0,0.756154618816195,0,0.443565449968902,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,2.31087814315709,3.46101249699031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:94245754..94245770,- | |short_description=p@chr9:94245754..94245770,- | ||
}} | }} |
Latest revision as of 03:29, 1 August 2015
Short description: | p@chr9:94245754..94245770, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:94245754..94245770, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 4.82e-15 | 6 |
fibrocyte | 4.42e-14 | 3 |
tendon cell | 4.42e-14 | 3 |
synovial cell | 1.09e-13 | 3 |
GAG secreting cell | 3.81e-10 | 9 |
carbohydrate secreting cell | 3.81e-10 | 9 |
bone marrow cell | 3.04e-09 | 10 |
fibroblast | 6.58e-09 | 76 |
stromal cell | 1.63e-08 | 28 |
amnion mesenchymal stem cell | 1.86e-08 | 5 |
fibroblast of periodontium | 4.30e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 4.42e-14 | 3 |
tendon | 4.42e-14 | 3 |
regular connective tissue | 4.42e-14 | 3 |
stratified squamous epithelium | 1.09e-13 | 3 |
layer of synovial tissue | 1.09e-13 | 3 |
synovial joint | 1.09e-13 | 3 |
synovial membrane of synovial joint | 1.09e-13 | 3 |
stroma of bone marrow | 1.33e-10 | 1 |
cavity lining | 1.08e-07 | 12 |
serous membrane | 1.08e-07 | 12 |
connective tissue | 2.57e-07 | 371 |
periodontium | 4.30e-07 | 6 |
dentition | 4.30e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 4.58e-11 | 1 |