FFCP PHASE1:Hg19::chr16:29874462..29874596,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:29874462..29874596,-
|short_description=p1@CDIPT
|description=CAGE_peak_1_at_CDIPT_5end
|association_with_transcript=0bp_to_NM_006319,uc002dul.2,uc002dum....") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10423 | |EntrezGene=10423 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1769 | |HGNC=1769 | ||
|TSSclassifier=strong | |||
|UniProt=A8K3L7,O14735 | |UniProt=A8K3L7,O14735 | ||
|association_with_transcript=0bp_to_NM_006319,uc002dul.2,uc002dum.2,uc002dun.2_5end | |||
|cluster_id=chr16:29874462..29874596,- | |||
|description=CAGE_peak_1_at_CDIPT_5end | |||
|id=chr16:29874462..29874596,- | |||
|ontology_enrichment_celltype=CL:0000136!2.19e-09!15;CL:0000192!1.42e-07!42;CL:0000514!1.42e-07!42;CL:0000183!2.35e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.10e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.19e-09,15;CL:0000192,5.95e-08,43;CL:0000514,5.95e-08,43;CL:0000222,8.91e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!9.99e-14!659;UBERON:0003914!4.57e-12!118;UBERON:0004872!2.04e-11!84;UBERON:0000926!7.04e-10!448;UBERON:0004120!7.04e-10!448;UBERON:0006603!7.04e-10!448;UBERON:0000467!1.25e-09!625;UBERON:0001009!1.50e-09!113;UBERON:0000475!1.64e-09!365;UBERON:0000477!1.74e-09!286;UBERON:0000480!2.21e-09!626;UBERON:0002100!3.43e-09!216;UBERON:0009569!3.91e-09!113;UBERON:0004111!6.69e-09!241;UBERON:0004535!9.56e-09!110;UBERON:0007023!9.97e-09!115;UBERON:0000481!1.15e-08!347;UBERON:0005256!1.33e-08!143;UBERON:0003103!3.07e-08!69;UBERON:0007100!2.90e-07!27;UBERON:0000922!3.05e-07!612;UBERON:0003104!3.43e-07!238;UBERON:0009142!3.43e-07!238;UBERON:0000025!4.67e-07!194;UBERON:0001981!5.79e-07!60;UBERON:0007500!5.79e-07!60;UBERON:0004537!5.79e-07!60;UBERON:0006965!5.79e-07!60;UBERON:0000923!7.03e-07!604;UBERON:0005291!7.03e-07!604;UBERON:0006598!7.03e-07!604;UBERON:0002532!7.03e-07!604;UBERON:0002050!7.35e-07!605;UBERON:0005423!7.35e-07!605;UBERON:0001637!9.99e-07!42;UBERON:0003509!9.99e-07!42;UBERON:0004572!9.99e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;8.56e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.00e-11,117;UBERON:0004872,2.18e-11,83;UBERON:0003104,1.47e-10,160;UBERON:0009142,1.47e-10,160;UBERON:0001009,1.67e-09,112;UBERON:0002100,5.25e-09,199;UBERON:0007023,8.27e-09,114;UBERON:0009569,9.47e-09,112;UBERON:0000926,9.50e-09,315;UBERON:0004120,9.50e-09,315;UBERON:0006603,9.50e-09,315;UBERON:0004535,1.06e-08,109;UBERON:0004111,1.57e-08,240;UBERON:0003103,6.64e-08,68;UBERON:0005256,1.08e-07,122;UBERON:0005423,2.41e-07,581;UBERON:0007100,2.90e-07,27;UBERON:0007500,6.25e-07,59;UBERON:0001981,6.25e-07,59;UBERON:0004537,6.25e-07,59;UBERON:0006965,6.25e-07,59;UBERON:0000922,6.92e-07,592;UBERON:0001637,9.99e-07,42;UBERON:0003509,9.99e-07,42;UBERON:0004572,9.99e-07,42 | |||
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| ||
|short_description=p1@CDIPT | |||
}} | }} |
Latest revision as of 04:48, 16 September 2015
Short description: | p1@CDIPT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDIPT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_006319, uc002dul.2, uc002dum.2, uc002dun.2_5end |
EntrezGene: | CDIPT |
HGNC: | 1769 |
UniProt: | A8K3L7O14735 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.19e-09 | 15 |
smooth muscle cell | 5.95e-08 | 43 |
smooth muscle myoblast | 5.95e-08 | 43 |
mesodermal cell | 8.91e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.00e-11 | 117 |
splanchnic layer of lateral plate mesoderm | 2.18e-11 | 83 |
mesenchyme | 1.47e-10 | 160 |
entire embryonic mesenchyme | 1.47e-10 | 160 |
circulatory system | 1.67e-09 | 112 |
trunk | 5.25e-09 | 199 |
adult organism | 8.27e-09 | 114 |
subdivision of trunk | 9.47e-09 | 112 |
mesoderm | 9.50e-09 | 315 |
mesoderm-derived structure | 9.50e-09 | 315 |
presumptive mesoderm | 9.50e-09 | 315 |
cardiovascular system | 1.06e-08 | 109 |
anatomical conduit | 1.57e-08 | 240 |
compound organ | 6.64e-08 | 68 |
trunk mesenchyme | 1.08e-07 | 122 |
developing anatomical structure | 2.41e-07 | 581 |
primary circulatory organ | 2.90e-07 | 27 |
epithelial tube open at both ends | 6.25e-07 | 59 |
blood vessel | 6.25e-07 | 59 |
blood vasculature | 6.25e-07 | 59 |
vascular cord | 6.25e-07 | 59 |
embryo | 6.92e-07 | 592 |
artery | 9.99e-07 | 42 |
arterial blood vessel | 9.99e-07 | 42 |
arterial system | 9.99e-07 | 42 |