FFCP PHASE1:Hg19::chr6:123110465..123110480,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10924 | |EntrezGene=10924 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17389 | |HGNC=17389 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z729 | |UniProt=B7Z729 | ||
|association_with_transcript=0bp_to_ENST00000539041_5end | |association_with_transcript=0bp_to_ENST00000539041_5end | ||
|cluster_id=chr6:123110465..123110480,+ | |||
|coexpression_cluster_id=C2841 | |||
|description=CAGE_peak_3_at_SMPDL3A_5end | |description=CAGE_peak_3_at_SMPDL3A_5end | ||
|id=chr6:123110465..123110480,+ | |id=chr6:123110465..123110480,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.20e-22!42;CL:0000860!1.20e-21!45;CL:0002194!1.97e-17!63;CL:0000576!1.97e-17!63;CL:0000040!1.97e-17!63;CL:0000559!1.97e-17!63;CL:0002009!1.70e-16!65;CL:0000839!5.66e-16!70;CL:0000557!8.60e-16!71;CL:0000766!3.23e-15!76 | |ontology_enrichment_celltype=CL:0002057!5.20e-22!42;CL:0000860!1.20e-21!45;CL:0002194!1.97e-17!63;CL:0000576!1.97e-17!63;CL:0000040!1.97e-17!63;CL:0000559!1.97e-17!63;CL:0002009!1.70e-16!65;CL:0000839!5.66e-16!70;CL:0000557!8.60e-16!71;CL:0000766!3.23e-15!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.07e-22;33!CL:0002057;3.07e-22;33!CL:0000576;5.02e-20;48!CL:0000473;2.44e-17;39!CL:0000234;2.44e-17;39!CL:0000766;1.81e-12;69!CL:0002393;7.78e-07;6!CL:0002397;7.78e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.50e-33,42;CL:0002057,2.50e-33,42;CL:0000473,6.45e-31,48;CL:0000234,6.45e-31,48;CL:0002194,1.15e-25,59;CL:0000576,1.15e-25,59;CL:0000040,1.15e-25,59;CL:0000559,1.15e-25,59;CL:0002009,2.43e-24,61;CL:0000766,8.56e-23,72;CL:0000839,1.58e-22,66;CL:0000557,5.70e-22,67;CL:0000763,2.23e-10,108;CL:0000049,2.23e-10,108;CL:0002393,9.45e-10,9;CL:0002397,9.45e-10,9;CL:0002087,5.02e-08,115;CL:0002031,3.30e-07,120;CL:0000738,9.35e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.23e-24;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!6.05e-21!511;UBERON:0000468!1.01e-15!659;UBERON:0000467!3.06e-13!625;UBERON:0000480!5.14e-13!626;UBERON:0002371!8.03e-13!80;UBERON:0002405!2.64e-12!115;UBERON:0002050!1.20e-11!605;UBERON:0005423!1.20e-11!605;UBERON:0000922!1.67e-11!612;UBERON:0001474!2.14e-11!86;UBERON:0000923!2.29e-11!604;UBERON:0005291!2.29e-11!604;UBERON:0006598!2.29e-11!604;UBERON:0002532!2.29e-11!604;UBERON:0002390!4.39e-10!102;UBERON:0003061!4.39e-10!102;UBERON:0004765!1.92e-09!101;UBERON:0001434!1.92e-09!101;UBERON:0002193!1.20e-08!112;UBERON:0007023!2.62e-08!115;UBERON:0001007!1.18e-07!155;UBERON:0001555!1.18e-07!155;UBERON:0007026!1.18e-07!155;UBERON:0004921!2.11e-07!129;UBERON:0004185!2.11e-07!129;UBERON:0005409!5.78e-07!35;UBERON:0004119!6.53e-07!169;UBERON:0000925!6.53e-07!169;UBERON:0006595!6.53e-07!169 | |ontology_enrichment_uberon=UBERON:0000062!6.05e-21!511;UBERON:0000468!1.01e-15!659;UBERON:0000467!3.06e-13!625;UBERON:0000480!5.14e-13!626;UBERON:0002371!8.03e-13!80;UBERON:0002405!2.64e-12!115;UBERON:0002050!1.20e-11!605;UBERON:0005423!1.20e-11!605;UBERON:0000922!1.67e-11!612;UBERON:0001474!2.14e-11!86;UBERON:0000923!2.29e-11!604;UBERON:0005291!2.29e-11!604;UBERON:0006598!2.29e-11!604;UBERON:0002532!2.29e-11!604;UBERON:0002390!4.39e-10!102;UBERON:0003061!4.39e-10!102;UBERON:0004765!1.92e-09!101;UBERON:0001434!1.92e-09!101;UBERON:0002193!1.20e-08!112;UBERON:0007023!2.62e-08!115;UBERON:0001007!1.18e-07!155;UBERON:0001555!1.18e-07!155;UBERON:0007026!1.18e-07!155;UBERON:0004921!2.11e-07!129;UBERON:0004185!2.11e-07!129;UBERON:0005409!5.78e-07!35;UBERON:0004119!6.53e-07!169;UBERON:0000925!6.53e-07!169;UBERON:0006595!6.53e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.46e-08;33!UBERON:0000160;6.22e-08;17!UBERON:0005409;7.14e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.17e-18,76;UBERON:0001474,2.01e-17,82;UBERON:0002405,6.38e-17,93;UBERON:0004765,1.37e-14,90;UBERON:0002390,8.16e-14,98;UBERON:0003061,8.16e-14,98;UBERON:0002193,3.62e-13,108;UBERON:0001434,1.80e-12,100;UBERON:0005409,3.33e-09,25;UBERON:0002204,3.72e-09,167;UBERON:0000160,2.85e-08,17;UBERON:0004921,1.30e-07,118 | |||
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| ||
|short_description=p3@SMPDL3A | |short_description=p3@SMPDL3A | ||
}} | }} |
Latest revision as of 05:17, 20 September 2015
Short description: | p3@SMPDL3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SMPDL3A_5end |
Coexpression cluster: | C2841_sacrococcigeal_CD14_Smooth_colon_Prostate_anaplastic_tridermal |
Association with transcript: | 0bp_to_ENST00000539041_5end |
EntrezGene: | SMPDL3A |
HGNC: | 17389 |
UniProt: | B7Z729 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.50e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.50e-33 | 42 |
defensive cell | 6.45e-31 | 48 |
phagocyte | 6.45e-31 | 48 |
monopoietic cell | 1.15e-25 | 59 |
monocyte | 1.15e-25 | 59 |
monoblast | 1.15e-25 | 59 |
promonocyte | 1.15e-25 | 59 |
macrophage dendritic cell progenitor | 2.43e-24 | 61 |
myeloid leukocyte | 8.56e-23 | 72 |
myeloid lineage restricted progenitor cell | 1.58e-22 | 66 |
granulocyte monocyte progenitor cell | 5.70e-22 | 67 |
myeloid cell | 2.23e-10 | 108 |
common myeloid progenitor | 2.23e-10 | 108 |
intermediate monocyte | 9.45e-10 | 9 |
CD14-positive, CD16-positive monocyte | 9.45e-10 | 9 |
nongranular leukocyte | 5.02e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 3.30e-07 | 120 |
leukocyte | 9.35e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.17e-18 | 76 |
bone element | 2.01e-17 | 82 |
immune system | 6.38e-17 | 93 |
skeletal element | 1.37e-14 | 90 |
hematopoietic system | 8.16e-14 | 98 |
blood island | 8.16e-14 | 98 |
hemolymphoid system | 3.62e-13 | 108 |
skeletal system | 1.80e-12 | 100 |
gastrointestinal system | 3.33e-09 | 25 |
musculoskeletal system | 3.72e-09 | 167 |
intestine | 2.85e-08 | 17 |
subdivision of digestive tract | 1.30e-07 | 118 |