FFCP PHASE1:Hg19::chr16:53483956..53483982,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:53483956..53483982,+
|short_description=p4@RBL2
|description=CAGE_peak_4_at_RBL2_5end
|association_with_transcript=0bp_to_uc010vgw.1_5end
|EntrezGene=593...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5934 | |EntrezGene=5934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9894 | |HGNC=9894 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010vgw.1_5end | |||
|cluster_id=chr16:53483956..53483982,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_4_at_RBL2_5end | |||
|id=chr16:53483956..53483982,+ | |||
|ontology_enrichment_celltype=CL:0000791!9.44e-32!18;CL:0000789!9.44e-32!18;CL:0002420!9.44e-32!18;CL:0002419!9.44e-32!18;CL:0000790!9.44e-32!18;CL:0000084!3.19e-26!25;CL:0000827!3.19e-26!25;CL:0000838!4.38e-24!52;CL:0000542!1.90e-23!53;CL:0000051!1.90e-23!53;CL:0000625!3.65e-21!11;CL:0002087!4.03e-12!119;CL:0000624!3.75e-11!6;CL:0000738!8.14e-11!140;CL:0002031!8.04e-09!124;CL:0000037!1.69e-08!172;CL:0000566!1.69e-08!172;CL:0000988!5.93e-08!182;CL:0002032!2.09e-07!165;CL:0000837!2.09e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.55e-51;18!CL:0000789;1.55e-51;18!CL:0002419;1.55e-51;18!CL:0000625;9.13e-42;11!CL:0000084;1.21e-40;25!CL:0000542;1.84e-15;53!CL:0000624;3.30e-15;6!CL:0000226;1.72e-11;3!CL:0000842;1.72e-11;3!CL:0000623;3.44e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.78e-51,18;CL:0000789,1.78e-51,18;CL:0002420,1.78e-51,18;CL:0002419,1.78e-51,18;CL:0000790,1.78e-51,18;CL:0000625,8.97e-42,11;CL:0000084,1.30e-40,25;CL:0000827,1.30e-40,25;CL:0000838,6.43e-27,52;CL:0000542,2.61e-26,53;CL:0000051,2.61e-26,53;CL:0000624,3.79e-15,6;CL:0002087,5.08e-14,115;CL:0000226,1.88e-11,3;CL:0000842,1.88e-11,3;CL:0000623,2.92e-11,3;CL:0000825,2.92e-11,3;CL:0000738,5.81e-11,136;CL:0002031,1.05e-09,120;CL:0000037,8.25e-08,168;CL:0000988,3.88e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.55e-51;18!CL:0000051;1.84e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.93e-16!15;UBERON:0000179!3.93e-16!15;UBERON:0000463!3.93e-16!15;UBERON:0004177!3.07e-08!7;UBERON:0007023!2.06e-07!115;UBERON:0002370!3.92e-07!4;UBERON:0005058!3.92e-07!4;UBERON:0009113!3.92e-07!4;UBERON:0003295!3.92e-07!4;UBERON:0005562!3.92e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.55e-28;15!UBERON:0000179;3.55e-28;15!UBERON:0000463;3.55e-28;15!UBERON:0002390;2.34e-13;32!UBERON:0002193;4.26e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.65e-28,15;UBERON:0000179,3.65e-28,15;UBERON:0000463,3.65e-28,15 | |||
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| ||
|short_description=p4@RBL2 | |||
}} | }} |
Latest revision as of 22:47, 16 September 2015
Short description: | p4@RBL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RBL2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_uc010vgw.1_5end |
EntrezGene: | RBL2 |
HGNC: | 9894 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.78e-51 | 18 |
alpha-beta T cell | 1.78e-51 | 18 |
immature T cell | 1.78e-51 | 18 |
mature T cell | 1.78e-51 | 18 |
immature alpha-beta T cell | 1.78e-51 | 18 |
CD8-positive, alpha-beta T cell | 8.97e-42 | 11 |
T cell | 1.30e-40 | 25 |
pro-T cell | 1.30e-40 | 25 |
lymphoid lineage restricted progenitor cell | 6.43e-27 | 52 |
lymphocyte | 2.61e-26 | 53 |
common lymphoid progenitor | 2.61e-26 | 53 |
CD4-positive, alpha-beta T cell | 3.79e-15 | 6 |
nongranular leukocyte | 5.08e-14 | 115 |
single nucleate cell | 1.88e-11 | 3 |
mononuclear cell | 1.88e-11 | 3 |
natural killer cell | 2.92e-11 | 3 |
pro-NK cell | 2.92e-11 | 3 |
leukocyte | 5.81e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 1.05e-09 | 120 |
hematopoietic stem cell | 8.25e-08 | 168 |
hematopoietic cell | 3.88e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 3.65e-28 | 15 |
haemolymphatic fluid | 3.65e-28 | 15 |
organism substance | 3.65e-28 | 15 |