FFCP PHASE1:Hg19::chr6:31683157..31683167,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58530 | |EntrezGene=58530 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13935 | |HGNC=13935 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_ENST00000479334,uc003nwg.1_5end | |association_with_transcript=24bp_to_ENST00000479334,uc003nwg.1_5end | ||
|cluster_id=chr6:31683157..31683167,+ | |||
|coexpression_cluster_id=C311 | |||
|description=CAGE_peak_3_at_LY6G6D_5end | |description=CAGE_peak_3_at_LY6G6D_5end | ||
|id=chr6:31683157..31683167,+ | |id=chr6:31683157..31683167,+ | ||
|ontology_enrichment_celltype=CL:0002253!5.41e-22!2;CL:0000540!2.89e-16!6;CL:0000031!2.89e-16!6;CL:0000404!2.89e-16!6;CL:0000047!2.38e-12!8;CL:0002563!1.73e-11!4 | |ontology_enrichment_celltype=CL:0002253!5.41e-22!2;CL:0000540!2.89e-16!6;CL:0000031!2.89e-16!6;CL:0000404!2.89e-16!6;CL:0000047!2.38e-12!8;CL:0002563!1.73e-11!4 | ||
|ontology_enrichment_celltype_v019=CL:0002253;7.67e-18;2!CL:0000214;3.06e-12;3!CL:0002563;1.32e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,7.67e-18,2;CL:0000214,2.89e-12,3;CL:0002563,1.32e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.15e-10;31 | |||
|ontology_enrichment_disease=DOID:3119!1.88e-12!14;DOID:0050619!6.26e-12!1;DOID:1357!6.26e-12!1 | |ontology_enrichment_disease=DOID:3119!1.88e-12!14;DOID:0050619!6.26e-12!1;DOID:1357!6.26e-12!1 | ||
|ontology_enrichment_disease_v019=DOID:3119;5.79e-22;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,5.79e-22,14 | |||
|ontology_enrichment_uberon=UBERON:0001052!1.64e-24!4;UBERON:0004907!9.56e-20!5;UBERON:0001764!6.26e-12!1;UBERON:0001825!6.26e-12!1;UBERON:0001242!1.73e-11!4;UBERON:0001262!1.73e-11!4;UBERON:0004786!1.73e-11!4;UBERON:0004808!1.73e-11!4;UBERON:0001277!1.73e-11!4;UBERON:0003350!2.27e-09!5;UBERON:0000059!2.74e-09!11;UBERON:0001046!3.75e-09!19 | |ontology_enrichment_uberon=UBERON:0001052!1.64e-24!4;UBERON:0004907!9.56e-20!5;UBERON:0001764!6.26e-12!1;UBERON:0001825!6.26e-12!1;UBERON:0001242!1.73e-11!4;UBERON:0001262!1.73e-11!4;UBERON:0004786!1.73e-11!4;UBERON:0004808!1.73e-11!4;UBERON:0001277!1.73e-11!4;UBERON:0003350!2.27e-09!5;UBERON:0000059!2.74e-09!11;UBERON:0001046!3.75e-09!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;5.98e-34;4!UBERON:0004907;2.08e-27;5!UBERON:0000059;4.52e-13;11!UBERON:0006915;3.06e-12;3!UBERON:0007616;3.06e-12;3!UBERON:0002217;3.06e-12;3!UBERON:0002018;3.06e-12;3!UBERON:0001242;1.32e-09;4!UBERON:0001262;1.32e-09;4!UBERON:0004786;1.32e-09;4!UBERON:0004808;1.32e-09;4!UBERON:0001277;1.32e-09;4!UBERON:0000160;2.25e-08;17!UBERON:0005409;9.39e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,5.98e-34,4;UBERON:0004907,2.08e-27,5;UBERON:0000059,4.52e-13,11;UBERON:0006915,2.89e-12,3;UBERON:0007616,2.89e-12,3;UBERON:0002217,2.89e-12,3;UBERON:0002018,2.89e-12,3;UBERON:0001242,1.32e-09,4;UBERON:0001262,1.32e-09,4;UBERON:0004786,1.32e-09,4;UBERON:0004808,1.32e-09,4;UBERON:0001277,1.32e-09,4;UBERON:0000160,2.25e-08,17;UBERON:0001046,5.54e-08,19 | |||
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|short_description=p3@LY6G6D | |short_description=p3@LY6G6D | ||
}} | }} |
Latest revision as of 23:23, 17 September 2015
Short description: | p3@LY6G6D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LY6G6D_5end |
Coexpression cluster: | C311_rectal_heart_choriocarcinoma_placenta_chorionic_lung_ductal |
Association with transcript: | 24bp_to_ENST00000479334, uc003nwg.1_5end |
EntrezGene: | LY6G6D |
HGNC: | 13935 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 7.67e-18 | 2 |
synovial cell | 2.89e-12 | 3 |
intestinal epithelial cell | 1.32e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 5.98e-34 | 4 |
lower digestive tract | 2.08e-27 | 5 |
large intestine | 4.52e-13 | 11 |
stratified squamous epithelium | 2.89e-12 | 3 |
layer of synovial tissue | 2.89e-12 | 3 |
synovial joint | 2.89e-12 | 3 |
synovial membrane of synovial joint | 2.89e-12 | 3 |
intestinal mucosa | 1.32e-09 | 4 |
wall of intestine | 1.32e-09 | 4 |
gastrointestinal system mucosa | 1.32e-09 | 4 |
gastrointestinal system epithelium | 1.32e-09 | 4 |
intestinal epithelium | 1.32e-09 | 4 |
intestine | 2.25e-08 | 17 |
hindgut | 5.54e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 5.79e-22 | 14 |