FFCP PHASE1:Hg19::chr7:76911438..76911446,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57639 | |EntrezGene=57639 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29296 | |HGNC=29296 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-169bp_to_ENST00000461259,uc003ugc.2_5end | |association_with_transcript=-169bp_to_ENST00000461259,uc003ugc.2_5end | ||
|cluster_id=chr7:76911438..76911446,+ | |||
|coexpression_cluster_id=C224 | |||
|description=CAGE_peak_12_at_CCDC146_5end | |description=CAGE_peak_12_at_CCDC146_5end | ||
|id=chr7:76911438..76911446,+ | |id=chr7:76911438..76911446,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002149;2.59e-12;6!CL:0002255;2.59e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,2.74e-12,6;CL:0002255,2.74e-12,6 | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.96e-34;2!UBERON:0005795;6.34e-08;10 | |||
|ontology_enrichment_disease=DOID:2355!3.25e-19!1;DOID:4468!1.43e-10!2;DOID:74!2.72e-10!2 | |ontology_enrichment_disease=DOID:2355!3.25e-19!1;DOID:4468!1.43e-10!2;DOID:74!2.72e-10!2 | ||
|ontology_enrichment_disease_v019=DOID:4468;3.61e-34;2!DOID:3001;2.59e-12;6!DOID:299;1.06e-11;25!DOID:120;6.40e-11;27!DOID:193;3.03e-10;29 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.61e-34,2;DOID:3001,2.74e-12,6;DOID:299,1.09e-11,25;DOID:120,6.56e-11,27;DOID:193,3.10e-10,29 | |||
|ontology_enrichment_uberon=UBERON:0001301!1.08e-19!1;UBERON:0003133!1.74e-09!48;UBERON:0005795!4.66e-08!22;UBERON:0005156!1.01e-07!59;UBERON:0000990!1.01e-07!59;UBERON:0003135!1.56e-07!11;UBERON:0009722!1.84e-07!11;UBERON:0007690!1.84e-07!11;UBERON:0006947!1.93e-07!3;UBERON:0004054!1.93e-07!3;UBERON:0007023!2.56e-07!115;UBERON:0004175!3.57e-07!25 | |ontology_enrichment_uberon=UBERON:0001301!1.08e-19!1;UBERON:0003133!1.74e-09!48;UBERON:0005795!4.66e-08!22;UBERON:0005156!1.01e-07!59;UBERON:0000990!1.01e-07!59;UBERON:0003135!1.56e-07!11;UBERON:0009722!1.84e-07!11;UBERON:0007690!1.84e-07!11;UBERON:0006947!1.93e-07!3;UBERON:0004054!1.93e-07!3;UBERON:0007023!2.56e-07!115;UBERON:0004175!3.57e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;3.34e-66;1!UBERON:0006947;3.66e-23;3!UBERON:0004054;3.66e-23;3!UBERON:0005904;9.45e-18;4!UBERON:0004175;1.16e-13;21!UBERON:0000058;6.34e-08;10!UBERON:0003135;2.55e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.39e-66,1;UBERON:0006947,3.27e-23,3;UBERON:0004054,3.27e-23,3;UBERON:0005904,8.69e-18,4;UBERON:0004175,1.15e-11,25;UBERON:0005103,1.35e-09,8;UBERON:0000083,1.35e-09,8;UBERON:0009201,1.35e-09,8;UBERON:0006553,1.35e-09,8;UBERON:0003074,1.35e-09,8;UBERON:0003060,1.35e-09,8;UBERON:0000080,1.12e-08,9;UBERON:0002120,1.12e-08,9;UBERON:0004875,1.12e-08,9;UBERON:0005721,1.12e-08,9;UBERON:0005754,1.12e-08,9;UBERON:0007297,1.12e-08,9;UBERON:0003135,2.47e-07,11;UBERON:0004876,2.47e-07,11;UBERON:0003887,7.92e-07,12 | |||
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|short_description=p12@CCDC146 | |short_description=p12@CCDC146 | ||
}} | }} |
Latest revision as of 14:28, 19 September 2015
Short description: | p12@CCDC146 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CCDC146_5end |
Coexpression cluster: | C224_clear_serous_pleomorphic_choriocarcinoma_mesothelioma_amniotic_renal |
Association with transcript: | -169bp_to_ENST00000461259, uc003ugc.2_5end |
EntrezGene: | CCDC146 |
HGNC: | 29296 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.74e-12 | 6 |
stromal cell of endometrium | 2.74e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
epididymis | 2.39e-66 | 1 |
male genital duct | 3.27e-23 | 3 |
internal male genitalia | 3.27e-23 | 3 |
duct of male reproductive system | 8.69e-18 | 4 |
internal genitalia | 1.15e-11 | 25 |
mesonephric epithelium | 1.35e-09 | 8 |
mesonephric tubule | 1.35e-09 | 8 |
nephric duct | 1.35e-09 | 8 |
renal duct | 1.35e-09 | 8 |
mesonephric duct | 1.35e-09 | 8 |
pronephric duct | 1.35e-09 | 8 |
mesonephros | 1.12e-08 | 9 |
pronephros | 1.12e-08 | 9 |
nephrogenic cord | 1.12e-08 | 9 |
pronephric mesoderm | 1.12e-08 | 9 |
rostral part of nephrogenic cord | 1.12e-08 | 9 |
presumptive pronephric mesoderm | 1.12e-08 | 9 |
male reproductive organ | 2.47e-07 | 11 |
urogenital ridge | 2.47e-07 | 11 |
intraembryonic coelom | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.61e-34 | 2 |
female reproductive endometrioid cancer | 2.74e-12 | 6 |
adenocarcinoma | 1.09e-11 | 25 |
female reproductive organ cancer | 6.56e-11 | 27 |
reproductive organ cancer | 3.10e-10 | 29 |