FFCP PHASE1:Hg19::chr7:95114860..95114870,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51666 | |EntrezGene=51666 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16009 | |HGNC=16009 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y574,Q14D68,Q8TBT2 | |UniProt=Q9Y574,Q14D68,Q8TBT2 | ||
|association_with_transcript=-342bp_to_ENST00000325885,ENST00000428113,NM_016116,NM_145872_5end | |association_with_transcript=-342bp_to_ENST00000325885,ENST00000428113,NM_016116,NM_145872_5end | ||
|cluster_id=chr7:95114860..95114870,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_8_at_ASB4_5end | |description=CAGE_peak_8_at_ASB4_5end | ||
|id=chr7:95114860..95114870,+ | |id=chr7:95114860..95114870,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;8.00e-18;3!CL:0002202;7.91e-07;9!CL:0002632;7.91e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,8.00e-18,3;CL:0002202,7.91e-07,9;CL:0002632,7.91e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3910!3.71e-09!2 | |ontology_enrichment_disease=DOID:3910!3.71e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:3910;5.56e-26;2!DOID:3908;2.94e-11;5!DOID:1325;2.03e-08;7!DOID:3904;2.03e-08;7!DOID:3905;7.91e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,5.56e-26,2;DOID:3908,2.94e-11,5;DOID:1325,2.03e-08,7;DOID:3904,2.03e-08,7;DOID:3905,7.91e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000007!7.33e-32!2;UBERON:0003112!1.21e-16!1;UBERON:0000032!1.21e-16!1;UBERON:0005253!1.21e-16!1;UBERON:0003128!1.21e-16!1;UBERON:0002241!1.21e-16!1;UBERON:0001703!1.21e-16!1;UBERON:0004761!1.21e-16!1;UBERON:0009617!1.21e-16!1;UBERON:0003296!1.79e-16!4;UBERON:0010133!1.79e-16!4;UBERON:0002022!3.07e-16!1;UBERON:0001894!7.99e-10!7;UBERON:0006222!7.99e-10!7;UBERON:0004903!3.71e-09!2;UBERON:0002173!3.71e-09!2;UBERON:0002186!3.71e-09!2;UBERON:0002780!4.16e-09!41;UBERON:0001890!4.16e-09!41;UBERON:0006240!4.16e-09!41;UBERON:0001873!6.42e-09!2;UBERON:0010122!6.42e-09!2;UBERON:0003080!6.78e-09!42 | |ontology_enrichment_uberon=UBERON:0000007!7.33e-32!2;UBERON:0003112!1.21e-16!1;UBERON:0000032!1.21e-16!1;UBERON:0005253!1.21e-16!1;UBERON:0003128!1.21e-16!1;UBERON:0002241!1.21e-16!1;UBERON:0001703!1.21e-16!1;UBERON:0004761!1.21e-16!1;UBERON:0009617!1.21e-16!1;UBERON:0003296!1.79e-16!4;UBERON:0010133!1.79e-16!4;UBERON:0002022!3.07e-16!1;UBERON:0001894!7.99e-10!7;UBERON:0006222!7.99e-10!7;UBERON:0004903!3.71e-09!2;UBERON:0002173!3.71e-09!2;UBERON:0002186!3.71e-09!2;UBERON:0002780!4.16e-09!41;UBERON:0001890!4.16e-09!41;UBERON:0006240!4.16e-09!41;UBERON:0001873!6.42e-09!2;UBERON:0010122!6.42e-09!2;UBERON:0003080!6.78e-09!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;5.56e-26;2!UBERON:0002173;5.56e-26;2!UBERON:0002186;5.56e-26;2!UBERON:0000007;7.14e-26;2!UBERON:0004821;8.00e-18;3!UBERON:0007499;8.00e-18;3!UBERON:0003215;8.00e-18;3!UBERON:0010368;8.00e-18;3!UBERON:0009911;8.00e-18;3!UBERON:0002299;8.00e-18;3!UBERON:0006524;8.00e-18;3!UBERON:0008874;8.00e-18;3!UBERON:0002169;8.00e-18;3!UBERON:0004894;8.00e-18;3!UBERON:0009856;1.00e-13;4!UBERON:0003296;1.13e-13;4!UBERON:0010133;1.13e-13;4!UBERON:0001894;2.18e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,5.56e-26,2;UBERON:0002173,5.56e-26,2;UBERON:0002186,5.56e-26,2;UBERON:0000007,7.14e-26,2;UBERON:0004821,8.00e-18,3;UBERON:0003215,8.00e-18,3;UBERON:0010368,8.00e-18,3;UBERON:0009911,8.00e-18,3;UBERON:0002299,8.00e-18,3;UBERON:0006524,8.00e-18,3;UBERON:0008874,8.00e-18,3;UBERON:0002169,8.00e-18,3;UBERON:0004894,8.00e-18,3;UBERON:0003296,1.13e-13,4;UBERON:0010133,1.13e-13,4;UBERON:0007499,5.71e-09,25;UBERON:0009856,1.15e-08,26;UBERON:0001894,2.18e-08,7;UBERON:0006222,2.18e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97790605528978,0,0,0,0,0,0,0,6.5448876519678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42786241694653,0.455324382702595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97790605528978,0,0,0,0,0,0,0,6.5448876519678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42786241694653,0.455324382702595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@ASB4 | |short_description=p8@ASB4 | ||
}} | }} |
Latest revision as of 04:46, 20 September 2015
Short description: | p8@ASB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ASB4_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | -342bp_to_ENST00000325885, ENST00000428113, NM_016116, NM_145872_5end |
EntrezGene: | ASB4 |
HGNC: | 16009 |
UniProt: | Q9Y574Q14D68Q8TBT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 8.00e-18 | 3 |
epithelial cell of tracheobronchial tree | 7.91e-07 | 9 |
epithelial cell of lower respiratory tract | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 5.56e-26 | 2 |
alveolar duct | 5.56e-26 | 2 |
bronchiole | 5.56e-26 | 2 |
pituitary gland | 7.14e-26 | 2 |
pulmonary alveolus epithelium | 8.00e-18 | 3 |
alveolus | 8.00e-18 | 3 |
pulmonary lobule | 8.00e-18 | 3 |
lobule | 8.00e-18 | 3 |
alveolus of lung | 8.00e-18 | 3 |
alveolar system | 8.00e-18 | 3 |
pulmonary acinus | 8.00e-18 | 3 |
alveolar sac | 8.00e-18 | 3 |
alveolar wall | 8.00e-18 | 3 |
gland of diencephalon | 1.13e-13 | 4 |
neuroendocrine gland | 1.13e-13 | 4 |
epithelial sac | 5.71e-09 | 25 |
sac | 1.15e-08 | 26 |
diencephalon | 2.18e-08 | 7 |
future diencephalon | 2.18e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 5.56e-26 | 2 |
non-small cell lung carcinoma | 2.94e-11 | 5 |
bronchus cancer | 2.03e-08 | 7 |
bronchogenic carcinoma | 2.03e-08 | 7 |
lung carcinoma | 7.91e-07 | 9 |